RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 LINC00158P58513 81 aa0.61□□□□□ -2.31
LINC00643-201ENST00000334389 KRTAP25-1Q3LHN0 102 aa0.61□□□□□ -2.31
LINC00643-201ENST00000334389 Q5W150 140 aa0.61□□□□□ -2.31
LINC00643-201ENST00000334389 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 DNAL4O96015 105 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 UBL5Q9BZL1 73 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 M0R2T5 61 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 TTTY13Q9BZ97 58 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 MMP24-AS1A0A0U1RRL7 71 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 A0A1B0GU33 70 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 P0C880 135 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 CASC2Q6XLA1 102 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 LINC00208Q96KT6 92 aa0.6□□□□□ -2.31
LINC00643-201ENST00000334389 H0Y9P7 68 aa0.59□□□□□ -2.31
LINC00643-201ENST00000334389 UQCR11O14957 56 aa0.59□□□□□ -2.31
LINC00643-201ENST00000334389 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
LINC00643-201ENST00000334389 IGKV2-24A0A0C4DH68 120 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 KRTAP12-4P60329 112 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 RBM3P98179 157 aaKnown RBP0.59□□□□□ -2.32
LINC00643-201ENST00000334389 C20orf197Q8N268 126 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 C8orf17Q9NRJ1 99 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 DEFB116Q30KQ4 102 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.32
LINC00643-201ENST00000334389 MRPL34Q9BQ48 92 aaKnown RBP0.59□□□□□ -2.32
LINC00643-201ENST00000334389 MUC19Q7Z5P9 8384 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 A0A087WVE0 104 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 NCR3O14931 201 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 PRLHP81277 87 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 COA5Q86WW8 74 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 SELENOKQ9Y6D0 94 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 IGKV3D-7A0A0C4DH55 119 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 INE1O15225 51 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 CAMK2N1Q7Z7J9 78 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 BRK1Q8WUW1 75 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 TOMM7Q9P0U1 55 aa0.58□□□□□ -2.32
LINC00643-201ENST00000334389 MT1LQ93083 61 aa0.57□□□□□ -2.32
LINC00643-201ENST00000334389 A0A0A0MQY5 61 aa0.57□□□□□ -2.32
LINC00643-201ENST00000334389 MT1AP04731 61 aa0.56□□□□□ -2.32
LINC00643-201ENST00000334389 SPINK7P58062 85 aa0.56□□□□□ -2.32
LINC00643-201ENST00000334389 PRR15LQ9BU68 103 aa0.56□□□□□ -2.32
LINC00643-201ENST00000334389 A8MU10 97 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 M0QZ58 72 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 SPTSSBQ8NFR3 76 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 IGLV9-49A0A0B4J1Y8 123 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
LINC00643-201ENST00000334389 ACYP2P14621 99 aa0.54□□□□□ -2.32
LINC00643-201ENST00000334389 SNURFQ9Y675 71 aa0.54□□□□□ -2.32
LINC00643-201ENST00000334389 CSAG1Q6PB30 78 aa0.53□□□□□ -2.32
LINC00643-201ENST00000334389 S4R3F8 94 aa0.53□□□□□ -2.32
LINC00643-201ENST00000334389 CHKB-CPT1BH3BT56 60 aa0.53□□□□□ -2.33
LINC00643-201ENST00000334389 MIR22HGQ0VDD5 57 aa0.53□□□□□ -2.33
LINC00643-201ENST00000334389 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
LINC00643-201ENST00000334389 Q8N9L7 120 aa0.52□□□□□ -2.33
LINC00643-201ENST00000334389 HAMPP81172 84 aa0.51□□□□□ -2.33
LINC00643-201ENST00000334389 A6NED7 52 aa0.51□□□□□ -2.33
LINC00643-201ENST00000334389 ADM2Q7Z4H4 148 aa0.51□□□□□ -2.33
LINC00643-201ENST00000334389 K7ERS5 55 aa0.5□□□□□ -2.33
LINC00643-201ENST00000334389 LCE3CQ5T5A8 94 aa0.5□□□□□ -2.33
LINC00643-201ENST00000334389 DEFB105AQ8NG35 78 aa0.49□□□□□ -2.33
LINC00643-201ENST00000334389 PRAC1Q96KF2 57 aa0.49□□□□□ -2.33
LINC00643-201ENST00000334389 A0A1B0GU69 56 aa0.48□□□□□ -2.33
LINC00643-201ENST00000334389 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
LINC00643-201ENST00000334389 KRTAP12-1P59990 96 aa0.48□□□□□ -2.33
LINC00643-201ENST00000334389 KRTAP13-4Q3LI77 160 aa0.47□□□□□ -2.33
LINC00643-201ENST00000334389 LUZP6Q538Z0 58 aa0.47□□□□□ -2.33
LINC00643-201ENST00000334389 TNP1P09430 55 aa0.45□□□□□ -2.34
LINC00643-201ENST00000334389 SPINT4Q6UDR6 99 aa0.45□□□□□ -2.34
LINC00643-201ENST00000334389 LCE3EQ5T5B0 92 aa0.44□□□□□ -2.34
LINC00643-201ENST00000334389 NDUFAF8A1L188 74 aa0.43□□□□□ -2.34
LINC00643-201ENST00000334389 R4GN34 69 aa0.43□□□□□ -2.34
LINC00643-201ENST00000334389 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
LINC00643-201ENST00000334389 KRTAP12-3P60328 96 aa0.39□□□□□ -2.35
LINC00643-201ENST00000334389 A0A0D9SG42 100 aa0.36□□□□□ -2.35
LINC00643-201ENST00000334389 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
LINC00643-201ENST00000334389 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
LINC00643-201ENST00000334389 LCE3DQ9BYE3 92 aa0.31□□□□□ -2.36
LINC00643-201ENST00000334389 PRM1P04553 51 aa0.22□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 69.8 ms