RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 A0A1W2PPM0 123 aa0.9□□□□□ -2.26
HIF1A-201ENST00000323441 UQCR10Q9UDW1 63 aa0.9□□□□□ -2.26
HIF1A-201ENST00000323441 FAM240AA0A1B0GVK7 77 aa0.9□□□□□ -2.27
HIF1A-201ENST00000323441 BATFQ16520 125 aa0.9□□□□□ -2.27
HIF1A-201ENST00000323441 LCE1FQ5T754 118 aa0.9□□□□□ -2.27
HIF1A-201ENST00000323441 UQCRQO14949 82 aa0.89□□□□□ -2.27
HIF1A-201ENST00000323441 TMEM258P61165 79 aa0.89□□□□□ -2.27
HIF1A-201ENST00000323441 Q1T7F1 81 aa0.89□□□□□ -2.27
HIF1A-201ENST00000323441 LCE3AQ5TA76 89 aa0.89□□□□□ -2.27
HIF1A-201ENST00000323441 PMAIP1Q13794 54 aa0.88□□□□□ -2.27
HIF1A-201ENST00000323441 A0A0D9SG42 100 aa0.88□□□□□ -2.27
HIF1A-201ENST00000323441 H7BZZ5 65 aa0.88□□□□□ -2.27
HIF1A-201ENST00000323441 KTN1-AS1Q86SY8 53 aa0.87□□□□□ -2.27
HIF1A-201ENST00000323441 H0Y9P7 68 aa0.87□□□□□ -2.27
HIF1A-201ENST00000323441 COX7CP15954 63 aa0.87□□□□□ -2.27
HIF1A-201ENST00000323441 CAMK2N1Q7Z7J9 78 aa0.87□□□□□ -2.27
HIF1A-201ENST00000323441 DMAC1Q96GE9 116 aa0.87□□□□□ -2.27
HIF1A-201ENST00000323441 MT1AP04731 61 aa0.87□□□□□ -2.27
HIF1A-201ENST00000323441 SPCS1Q9Y6A9 102 aa0.86□□□□□ -2.27
HIF1A-201ENST00000323441 KRTAP6-2Q3LI66 62 aa0.86□□□□□ -2.27
HIF1A-201ENST00000323441 TRAV7A0A075B6U4 112 aa0.86□□□□□ -2.27
HIF1A-201ENST00000323441 KRTAP6-1Q3LI64 71 aa0.86□□□□□ -2.27
HIF1A-201ENST00000323441 ANAPC13Q9BS18 74 aa0.86□□□□□ -2.27
HIF1A-201ENST00000323441 SERP1Q9Y6X1 66 aa0.86□□□□□ -2.27
HIF1A-201ENST00000323441 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
HIF1A-201ENST00000323441 SMIM26A0A096LP01 95 aa0.85□□□□□ -2.27
HIF1A-201ENST00000323441 SPTSSBQ8NFR3 76 aa0.84□□□□□ -2.27
HIF1A-201ENST00000323441 H3BPC8 53 aa0.83□□□□□ -2.28
HIF1A-201ENST00000323441 PSPHP1O15172 72 aa0.83□□□□□ -2.28
HIF1A-201ENST00000323441 LINC00208Q96KT6 92 aa0.83□□□□□ -2.28
HIF1A-201ENST00000323441 KRTAP13-4Q3LI77 160 aa0.83□□□□□ -2.28
HIF1A-201ENST00000323441 MP68P56378 58 aa0.82□□□□□ -2.28
HIF1A-201ENST00000323441 ATP5EP2Q5VTU8 51 aa0.82□□□□□ -2.28
HIF1A-201ENST00000323441 GTF2H5Q6ZYL4 71 aa0.82□□□□□ -2.28
HIF1A-201ENST00000323441 LCE1CQ5T751 118 aa0.82□□□□□ -2.28
HIF1A-201ENST00000323441 LCE1BQ5T7P3 118 aa0.82□□□□□ -2.28
HIF1A-201ENST00000323441 ACYP2P14621 99 aa0.81□□□□□ -2.28
HIF1A-201ENST00000323441 ETDBQ3ZM63 59 aa0.81□□□□□ -2.28
HIF1A-201ENST00000323441 OCR1Q9BZK8 76 aa0.81□□□□□ -2.28
HIF1A-201ENST00000323441 SERP2Q8N6R1 65 aa0.8□□□□□ -2.28
HIF1A-201ENST00000323441 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
HIF1A-201ENST00000323441 KRTAP12-3P60328 96 aa0.8□□□□□ -2.28
HIF1A-201ENST00000323441 TNP1P09430 55 aa0.79□□□□□ -2.28
HIF1A-201ENST00000323441 ATP5EP56381 51 aaPredicted RBP0.78□□□□□ -2.28
HIF1A-201ENST00000323441 KRTAP12-1P59990 96 aa0.78□□□□□ -2.28
HIF1A-201ENST00000323441 ROMO1P60602 79 aa0.78□□□□□ -2.28
HIF1A-201ENST00000323441 LINC00643Q86TS7 51 aa0.78□□□□□ -2.28
HIF1A-201ENST00000323441 CDC42SE1Q9NRR8 79 aa0.77□□□□□ -2.29
HIF1A-201ENST00000323441 CHKB-CPT1BH3BT56 60 aa0.76□□□□□ -2.29
HIF1A-201ENST00000323441 LCE3CQ5T5A8 94 aa0.76□□□□□ -2.29
HIF1A-201ENST00000323441 SPINT4Q6UDR6 99 aa0.76□□□□□ -2.29
HIF1A-201ENST00000323441 J3QR89 54 aa0.75□□□□□ -2.29
HIF1A-201ENST00000323441 SPANXA2-OT1Q8N9U9 137 aa0.73□□□□□ -2.29
HIF1A-201ENST00000323441 BRK1Q8WUW1 75 aa0.73□□□□□ -2.29
HIF1A-201ENST00000323441 OBSCNQ5VST9 7968 aa0.73□□□□□ -2.29
HIF1A-201ENST00000323441 SPATA8Q6RVD6 105 aa0.73□□□□□ -2.29
HIF1A-201ENST00000323441 LINC01558Q9Y6Z2 57 aa0.73□□□□□ -2.29
HIF1A-201ENST00000323441 A0A1B0GU33 70 aa0.72□□□□□ -2.29
HIF1A-201ENST00000323441 KRTAP25-1Q3LHN0 102 aa0.72□□□□□ -2.29
HIF1A-201ENST00000323441 PRAC1Q96KF2 57 aa0.71□□□□□ -2.3
HIF1A-201ENST00000323441 COA5Q86WW8 74 aa0.67□□□□□ -2.3
HIF1A-201ENST00000323441 LCE3EQ5T5B0 92 aa0.67□□□□□ -2.3
HIF1A-201ENST00000323441 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
HIF1A-201ENST00000323441 SNURFQ9Y675 71 aa0.65□□□□□ -2.31
HIF1A-201ENST00000323441 A0A1B0GU69 56 aa0.64□□□□□ -2.31
HIF1A-201ENST00000323441 MIR22HGQ0VDD5 57 aa0.64□□□□□ -2.31
HIF1A-201ENST00000323441 PRR15LQ9BU68 103 aa0.64□□□□□ -2.31
HIF1A-201ENST00000323441 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
HIF1A-201ENST00000323441 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
HIF1A-201ENST00000323441 LUZP6Q538Z0 58 aa0.61□□□□□ -2.31
HIF1A-201ENST00000323441 INE1O15225 51 aa0.58□□□□□ -2.32
HIF1A-201ENST00000323441 UQCR11O14957 56 aa0.57□□□□□ -2.32
HIF1A-201ENST00000323441 K7ERS5 55 aa0.55□□□□□ -2.32
HIF1A-201ENST00000323441 A6NED7 52 aa0.55□□□□□ -2.32
HIF1A-201ENST00000323441 LCE3DQ9BYE3 92 aa0.51□□□□□ -2.33
HIF1A-201ENST00000323441 MUC19Q7Z5P9 8384 aa0.45□□□□□ -2.34
HIF1A-201ENST00000323441 PRM1P04553 51 aa0.29□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms