RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CHMP2A-201ENST00000312547 MT1EP04732 61 aa4.68□□□□□ -1.66
CHMP2A-201ENST00000312547 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
CHMP2A-201ENST00000312547 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
CHMP2A-201ENST00000312547 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
CHMP2A-201ENST00000312547 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
CHMP2A-201ENST00000312547 SPRR2DP22532 72 aa4.57□□□□□ -1.68
CHMP2A-201ENST00000312547 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
CHMP2A-201ENST00000312547 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
CHMP2A-201ENST00000312547 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
CHMP2A-201ENST00000312547 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
CHMP2A-201ENST00000312547 MT1LQ93083 61 aa4.54□□□□□ -1.68
CHMP2A-201ENST00000312547 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
CHMP2A-201ENST00000312547 MT1GP13640 62 aa4.49□□□□□ -1.69
CHMP2A-201ENST00000312547 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
CHMP2A-201ENST00000312547 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
CHMP2A-201ENST00000312547 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
CHMP2A-201ENST00000312547 MT1MQ8N339 61 aa4.42□□□□□ -1.7
CHMP2A-201ENST00000312547 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CHMP2A-201ENST00000312547 H3BS24 57 aa4.37□□□□□ -1.71
CHMP2A-201ENST00000312547 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
CHMP2A-201ENST00000312547 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
CHMP2A-201ENST00000312547 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
CHMP2A-201ENST00000312547 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
CHMP2A-201ENST00000312547 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
CHMP2A-201ENST00000312547 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
CHMP2A-201ENST00000312547 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
CHMP2A-201ENST00000312547 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CHMP2A-201ENST00000312547 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
CHMP2A-201ENST00000312547 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
CHMP2A-201ENST00000312547 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
CHMP2A-201ENST00000312547 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
CHMP2A-201ENST00000312547 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
CHMP2A-201ENST00000312547 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
CHMP2A-201ENST00000312547 MT4P47944 62 aa4.05□□□□□ -1.76
CHMP2A-201ENST00000312547 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
CHMP2A-201ENST00000312547 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
CHMP2A-201ENST00000312547 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CHMP2A-201ENST00000312547 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
CHMP2A-201ENST00000312547 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
CHMP2A-201ENST00000312547 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
CHMP2A-201ENST00000312547 MT1AP04731 61 aa3.86□□□□□ -1.79
CHMP2A-201ENST00000312547 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CHMP2A-201ENST00000312547 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
CHMP2A-201ENST00000312547 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
CHMP2A-201ENST00000312547 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
CHMP2A-201ENST00000312547 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
CHMP2A-201ENST00000312547 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
CHMP2A-201ENST00000312547 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
CHMP2A-201ENST00000312547 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
CHMP2A-201ENST00000312547 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
CHMP2A-201ENST00000312547 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CHMP2A-201ENST00000312547 MT3P25713 68 aa3.5□□□□□ -1.85
CHMP2A-201ENST00000312547 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
CHMP2A-201ENST00000312547 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
CHMP2A-201ENST00000312547 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CHMP2A-201ENST00000312547 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CHMP2A-201ENST00000312547 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
CHMP2A-201ENST00000312547 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
CHMP2A-201ENST00000312547 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
CHMP2A-201ENST00000312547 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
CHMP2A-201ENST00000312547 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CHMP2A-201ENST00000312547 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CHMP2A-201ENST00000312547 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CHMP2A-201ENST00000312547 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CHMP2A-201ENST00000312547 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CHMP2A-201ENST00000312547 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
CHMP2A-201ENST00000312547 INE1O15225 51 aa2.67□□□□□ -1.98
CHMP2A-201ENST00000312547 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
CHMP2A-201ENST00000312547 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
CHMP2A-201ENST00000312547 PRM1P04553 51 aa2.47□□□□□ -2.01
CHMP2A-201ENST00000312547 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
CHMP2A-201ENST00000312547 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CHMP2A-201ENST00000312547 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
CHMP2A-201ENST00000312547 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CHMP2A-201ENST00000312547 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CHMP2A-201ENST00000312547 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 165.3 ms