RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
COL4A3-201ENST00000304990 Q1T7F1 81 aa3.91□□□□□ -1.78
COL4A3-201ENST00000304990 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
COL4A3-201ENST00000304990 MT4P47944 62 aa3.89□□□□□ -1.79
COL4A3-201ENST00000304990 V9GYY9 64 aa3.89□□□□□ -1.79
COL4A3-201ENST00000304990 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
COL4A3-201ENST00000304990 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
COL4A3-201ENST00000304990 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
COL4A3-201ENST00000304990 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
COL4A3-201ENST00000304990 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
COL4A3-201ENST00000304990 UQCR11O14957 56 aa3.81□□□□□ -1.8
COL4A3-201ENST00000304990 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
COL4A3-201ENST00000304990 A0A0D9SG42 100 aa3.79□□□□□ -1.8
COL4A3-201ENST00000304990 A8MU10 97 aa3.77□□□□□ -1.81
COL4A3-201ENST00000304990 PSPHP1O15172 72 aa3.77□□□□□ -1.81
COL4A3-201ENST00000304990 MT1EP04732 61 aa3.75□□□□□ -1.81
COL4A3-201ENST00000304990 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
COL4A3-201ENST00000304990 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
COL4A3-201ENST00000304990 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
COL4A3-201ENST00000304990 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
COL4A3-201ENST00000304990 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
COL4A3-201ENST00000304990 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
COL4A3-201ENST00000304990 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
COL4A3-201ENST00000304990 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
COL4A3-201ENST00000304990 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
COL4A3-201ENST00000304990 MT1GP13640 62 aa3.69□□□□□ -1.82
COL4A3-201ENST00000304990 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
COL4A3-201ENST00000304990 A6NED7 52 aa3.66□□□□□ -1.82
COL4A3-201ENST00000304990 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
COL4A3-201ENST00000304990 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
COL4A3-201ENST00000304990 MT1MQ8N339 61 aa3.61□□□□□ -1.83
COL4A3-201ENST00000304990 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
COL4A3-201ENST00000304990 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
COL4A3-201ENST00000304990 K7ERS5 55 aa3.59□□□□□ -1.83
COL4A3-201ENST00000304990 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
COL4A3-201ENST00000304990 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
COL4A3-201ENST00000304990 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
COL4A3-201ENST00000304990 TNP1P09430 55 aa3.53□□□□□ -1.84
COL4A3-201ENST00000304990 MT1LQ93083 61 aa3.51□□□□□ -1.85
COL4A3-201ENST00000304990 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
COL4A3-201ENST00000304990 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
COL4A3-201ENST00000304990 ROMO1P60602 79 aa3.43□□□□□ -1.86
COL4A3-201ENST00000304990 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
COL4A3-201ENST00000304990 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
COL4A3-201ENST00000304990 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
COL4A3-201ENST00000304990 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
COL4A3-201ENST00000304990 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
COL4A3-201ENST00000304990 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
COL4A3-201ENST00000304990 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
COL4A3-201ENST00000304990 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
COL4A3-201ENST00000304990 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
COL4A3-201ENST00000304990 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
COL4A3-201ENST00000304990 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
COL4A3-201ENST00000304990 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.89
COL4A3-201ENST00000304990 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
COL4A3-201ENST00000304990 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
COL4A3-201ENST00000304990 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
COL4A3-201ENST00000304990 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
COL4A3-201ENST00000304990 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
COL4A3-201ENST00000304990 MT3P25713 68 aa3□□□□□ -1.93
COL4A3-201ENST00000304990 KRTAP6-1Q3LI64 71 aa3□□□□□ -1.93
COL4A3-201ENST00000304990 MT1AP04731 61 aa2.99□□□□□ -1.93
COL4A3-201ENST00000304990 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
COL4A3-201ENST00000304990 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
COL4A3-201ENST00000304990 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
COL4A3-201ENST00000304990 NDUFAF8A1L188 74 aa2.58□□□□□ -2
COL4A3-201ENST00000304990 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
COL4A3-201ENST00000304990 LUZP6Q538Z0 58 aa2.55□□□□□ -2
COL4A3-201ENST00000304990 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
COL4A3-201ENST00000304990 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
COL4A3-201ENST00000304990 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
COL4A3-201ENST00000304990 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
COL4A3-201ENST00000304990 INE1O15225 51 aa2.18□□□□□ -2.06
COL4A3-201ENST00000304990 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
COL4A3-201ENST00000304990 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
COL4A3-201ENST00000304990 PRM1P04553 51 aa1.74□□□□□ -2.13
COL4A3-201ENST00000304990 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
COL4A3-201ENST00000304990 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 65 ms