RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
UBXN1-202ENST00000301935 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
UBXN1-202ENST00000301935 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
UBXN1-202ENST00000301935 SPRR2DP22532 72 aa6.04□□□□□ -1.44
UBXN1-202ENST00000301935 TNP1P09430 55 aa6.02□□□□□ -1.45
UBXN1-202ENST00000301935 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
UBXN1-202ENST00000301935 ROMO1P60602 79 aa6.01□□□□□ -1.45
UBXN1-202ENST00000301935 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
UBXN1-202ENST00000301935 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
UBXN1-202ENST00000301935 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
UBXN1-202ENST00000301935 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
UBXN1-202ENST00000301935 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
UBXN1-202ENST00000301935 GPR98Q8WXG9 6306 aa5.91□□□□□ -1.46
UBXN1-202ENST00000301935 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
UBXN1-202ENST00000301935 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
UBXN1-202ENST00000301935 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
UBXN1-202ENST00000301935 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
UBXN1-202ENST00000301935 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
UBXN1-202ENST00000301935 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
UBXN1-202ENST00000301935 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.51
UBXN1-202ENST00000301935 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
UBXN1-202ENST00000301935 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
UBXN1-202ENST00000301935 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
UBXN1-202ENST00000301935 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
UBXN1-202ENST00000301935 MT1EP04732 61 aa5.51□□□□□ -1.53
UBXN1-202ENST00000301935 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
UBXN1-202ENST00000301935 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
UBXN1-202ENST00000301935 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
UBXN1-202ENST00000301935 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
UBXN1-202ENST00000301935 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
UBXN1-202ENST00000301935 MT1LQ93083 61 aa5.36□□□□□ -1.55
UBXN1-202ENST00000301935 MT1GP13640 62 aa5.34□□□□□ -1.55
UBXN1-202ENST00000301935 AHNAK2Q8IVF2 5795 aa5.32□□□□□ -1.56
UBXN1-202ENST00000301935 MT4P47944 62 aa5.3□□□□□ -1.56
UBXN1-202ENST00000301935 MT1MQ8N339 61 aa5.22□□□□□ -1.57
UBXN1-202ENST00000301935 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
UBXN1-202ENST00000301935 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
UBXN1-202ENST00000301935 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
UBXN1-202ENST00000301935 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
UBXN1-202ENST00000301935 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
UBXN1-202ENST00000301935 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
UBXN1-202ENST00000301935 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
UBXN1-202ENST00000301935 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
UBXN1-202ENST00000301935 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
UBXN1-202ENST00000301935 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
UBXN1-202ENST00000301935 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
UBXN1-202ENST00000301935 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
UBXN1-202ENST00000301935 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
UBXN1-202ENST00000301935 MT1AP04731 61 aa4.59□□□□□ -1.67
UBXN1-202ENST00000301935 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
UBXN1-202ENST00000301935 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
UBXN1-202ENST00000301935 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
UBXN1-202ENST00000301935 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
UBXN1-202ENST00000301935 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
UBXN1-202ENST00000301935 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
UBXN1-202ENST00000301935 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
UBXN1-202ENST00000301935 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
UBXN1-202ENST00000301935 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
UBXN1-202ENST00000301935 MT3P25713 68 aa4.21□□□□□ -1.74
UBXN1-202ENST00000301935 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
UBXN1-202ENST00000301935 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
UBXN1-202ENST00000301935 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
UBXN1-202ENST00000301935 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
UBXN1-202ENST00000301935 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
UBXN1-202ENST00000301935 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
UBXN1-202ENST00000301935 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
UBXN1-202ENST00000301935 INE1O15225 51 aa3.61□□□□□ -1.83
UBXN1-202ENST00000301935 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
UBXN1-202ENST00000301935 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
UBXN1-202ENST00000301935 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
UBXN1-202ENST00000301935 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
UBXN1-202ENST00000301935 PRM1P04553 51 aa3.06□□□□□ -1.92
UBXN1-202ENST00000301935 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
UBXN1-202ENST00000301935 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
UBXN1-202ENST00000301935 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
UBXN1-202ENST00000301935 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
UBXN1-202ENST00000301935 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 50 ms