RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 SPRR2EP22531 72 aa4.55□□□□□ -1.68
RFC4-201ENST00000296273 SPRR2BP35325 72 aa4.55□□□□□ -1.68
RFC4-201ENST00000296273 SPRR2AP35326 72 aa4.55□□□□□ -1.68
RFC4-201ENST00000296273 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
RFC4-201ENST00000296273 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
RFC4-201ENST00000296273 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
RFC4-201ENST00000296273 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
RFC4-201ENST00000296273 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
RFC4-201ENST00000296273 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
RFC4-201ENST00000296273 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
RFC4-201ENST00000296273 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
RFC4-201ENST00000296273 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
RFC4-201ENST00000296273 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
RFC4-201ENST00000296273 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
RFC4-201ENST00000296273 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
RFC4-201ENST00000296273 SPRR2DP22532 72 aa4.4□□□□□ -1.7
RFC4-201ENST00000296273 MT1XP80297 61 aa4.4□□□□□ -1.7
RFC4-201ENST00000296273 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
RFC4-201ENST00000296273 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
RFC4-201ENST00000296273 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
RFC4-201ENST00000296273 TNP1P09430 55 aa4.29□□□□□ -1.72
RFC4-201ENST00000296273 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
RFC4-201ENST00000296273 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
RFC4-201ENST00000296273 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
RFC4-201ENST00000296273 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
RFC4-201ENST00000296273 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
RFC4-201ENST00000296273 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
RFC4-201ENST00000296273 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
RFC4-201ENST00000296273 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
RFC4-201ENST00000296273 MT1EP04732 61 aa3.92□□□□□ -1.78
RFC4-201ENST00000296273 MT1GP13640 62 aa3.86□□□□□ -1.79
RFC4-201ENST00000296273 MT4P47944 62 aa3.86□□□□□ -1.79
RFC4-201ENST00000296273 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
RFC4-201ENST00000296273 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
RFC4-201ENST00000296273 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
RFC4-201ENST00000296273 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
RFC4-201ENST00000296273 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
RFC4-201ENST00000296273 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
RFC4-201ENST00000296273 MT1MQ8N339 61 aa3.76□□□□□ -1.81
RFC4-201ENST00000296273 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
RFC4-201ENST00000296273 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
RFC4-201ENST00000296273 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
RFC4-201ENST00000296273 MT1LQ93083 61 aa3.71□□□□□ -1.82
RFC4-201ENST00000296273 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
RFC4-201ENST00000296273 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
RFC4-201ENST00000296273 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
RFC4-201ENST00000296273 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
RFC4-201ENST00000296273 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
RFC4-201ENST00000296273 MT3P25713 68 aa3.4□□□□□ -1.86
RFC4-201ENST00000296273 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
RFC4-201ENST00000296273 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
RFC4-201ENST00000296273 LCE1EQ5T753 118 aa3.34□□□□□ -1.88
RFC4-201ENST00000296273 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
RFC4-201ENST00000296273 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
RFC4-201ENST00000296273 INE1O15225 51 aa3.28□□□□□ -1.88
RFC4-201ENST00000296273 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
RFC4-201ENST00000296273 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
RFC4-201ENST00000296273 MT1AP04731 61 aa3.16□□□□□ -1.9
RFC4-201ENST00000296273 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
RFC4-201ENST00000296273 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
RFC4-201ENST00000296273 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
RFC4-201ENST00000296273 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
RFC4-201ENST00000296273 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
RFC4-201ENST00000296273 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
RFC4-201ENST00000296273 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
RFC4-201ENST00000296273 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
RFC4-201ENST00000296273 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
RFC4-201ENST00000296273 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
RFC4-201ENST00000296273 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
RFC4-201ENST00000296273 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
RFC4-201ENST00000296273 LCE1CQ5T751 118 aa2.56□□□□□ -2
RFC4-201ENST00000296273 PRM1P04553 51 aa2.38□□□□□ -2.03
RFC4-201ENST00000296273 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
RFC4-201ENST00000296273 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
RFC4-201ENST00000296273 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
RFC4-201ENST00000296273 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RFC4-201ENST00000296273 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms