RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
SNF8-201ENST00000290330 ROMO1P60602 79 aa4.3□□□□□ -1.72
SNF8-201ENST00000290330 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
SNF8-201ENST00000290330 SPRR2EP22531 72 aa4.27□□□□□ -1.73
SNF8-201ENST00000290330 SPRR2BP35325 72 aa4.27□□□□□ -1.73
SNF8-201ENST00000290330 SPRR2AP35326 72 aa4.27□□□□□ -1.73
SNF8-201ENST00000290330 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
SNF8-201ENST00000290330 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
SNF8-201ENST00000290330 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
SNF8-201ENST00000290330 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
SNF8-201ENST00000290330 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
SNF8-201ENST00000290330 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
SNF8-201ENST00000290330 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
SNF8-201ENST00000290330 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
SNF8-201ENST00000290330 SPRR2DP22532 72 aa4.13□□□□□ -1.75
SNF8-201ENST00000290330 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
SNF8-201ENST00000290330 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
SNF8-201ENST00000290330 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
SNF8-201ENST00000290330 TNP1P09430 55 aa4.01□□□□□ -1.77
SNF8-201ENST00000290330 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
SNF8-201ENST00000290330 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
SNF8-201ENST00000290330 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
SNF8-201ENST00000290330 MT1EP04732 61 aa3.9□□□□□ -1.79
SNF8-201ENST00000290330 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
SNF8-201ENST00000290330 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
SNF8-201ENST00000290330 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
SNF8-201ENST00000290330 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
SNF8-201ENST00000290330 MT1GP13640 62 aa3.79□□□□□ -1.8
SNF8-201ENST00000290330 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
SNF8-201ENST00000290330 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
SNF8-201ENST00000290330 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
SNF8-201ENST00000290330 MT1LQ93083 61 aa3.72□□□□□ -1.81
SNF8-201ENST00000290330 MT1MQ8N339 61 aa3.71□□□□□ -1.82
SNF8-201ENST00000290330 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
SNF8-201ENST00000290330 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SNF8-201ENST00000290330 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
SNF8-201ENST00000290330 MT4P47944 62 aa3.61□□□□□ -1.83
SNF8-201ENST00000290330 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
SNF8-201ENST00000290330 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
SNF8-201ENST00000290330 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
SNF8-201ENST00000290330 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SNF8-201ENST00000290330 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
SNF8-201ENST00000290330 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
SNF8-201ENST00000290330 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
SNF8-201ENST00000290330 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SNF8-201ENST00000290330 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
SNF8-201ENST00000290330 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
SNF8-201ENST00000290330 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
SNF8-201ENST00000290330 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SNF8-201ENST00000290330 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
SNF8-201ENST00000290330 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
SNF8-201ENST00000290330 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SNF8-201ENST00000290330 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SNF8-201ENST00000290330 MT1AP04731 61 aa3.16□□□□□ -1.9
SNF8-201ENST00000290330 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
SNF8-201ENST00000290330 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SNF8-201ENST00000290330 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
SNF8-201ENST00000290330 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
SNF8-201ENST00000290330 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
SNF8-201ENST00000290330 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SNF8-201ENST00000290330 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
SNF8-201ENST00000290330 INE1O15225 51 aa2.94□□□□□ -1.94
SNF8-201ENST00000290330 MT3P25713 68 aa2.9□□□□□ -1.95
SNF8-201ENST00000290330 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
SNF8-201ENST00000290330 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
SNF8-201ENST00000290330 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
SNF8-201ENST00000290330 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
SNF8-201ENST00000290330 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
SNF8-201ENST00000290330 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SNF8-201ENST00000290330 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SNF8-201ENST00000290330 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
SNF8-201ENST00000290330 PRM1P04553 51 aa2.21□□□□□ -2.06
SNF8-201ENST00000290330 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SNF8-201ENST00000290330 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
SNF8-201ENST00000290330 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SNF8-201ENST00000290330 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SNF8-201ENST00000290330 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 101.5 ms