RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 SPRR2EP22531 72 aa5.42□□□□□ -1.54
CT55-201ENST00000276241 SPRR2BP35325 72 aa5.42□□□□□ -1.54
CT55-201ENST00000276241 SPRR2AP35326 72 aa5.42□□□□□ -1.54
CT55-201ENST00000276241 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
CT55-201ENST00000276241 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
CT55-201ENST00000276241 KRTAP12-1P59990 96 aa5.4□□□□□ -1.55
CT55-201ENST00000276241 H3BS24 57 aa5.39□□□□□ -1.55
CT55-201ENST00000276241 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
CT55-201ENST00000276241 ROMO1P60602 79 aa5.34□□□□□ -1.55
CT55-201ENST00000276241 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
CT55-201ENST00000276241 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
CT55-201ENST00000276241 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
CT55-201ENST00000276241 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
CT55-201ENST00000276241 SPRR2DP22532 72 aa5.23□□□□□ -1.57
CT55-201ENST00000276241 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
CT55-201ENST00000276241 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
CT55-201ENST00000276241 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
CT55-201ENST00000276241 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
CT55-201ENST00000276241 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
CT55-201ENST00000276241 MT1EP04732 61 aa5.06□□□□□ -1.6
CT55-201ENST00000276241 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
CT55-201ENST00000276241 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
CT55-201ENST00000276241 TNP1P09430 55 aa4.99□□□□□ -1.61
CT55-201ENST00000276241 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
CT55-201ENST00000276241 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
CT55-201ENST00000276241 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
CT55-201ENST00000276241 MT1GP13640 62 aa4.87□□□□□ -1.63
CT55-201ENST00000276241 MT1LQ93083 61 aa4.85□□□□□ -1.63
CT55-201ENST00000276241 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
CT55-201ENST00000276241 MT1MQ8N339 61 aa4.81□□□□□ -1.64
CT55-201ENST00000276241 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CT55-201ENST00000276241 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
CT55-201ENST00000276241 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
CT55-201ENST00000276241 MT4P47944 62 aa4.59□□□□□ -1.67
CT55-201ENST00000276241 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
CT55-201ENST00000276241 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
CT55-201ENST00000276241 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
CT55-201ENST00000276241 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
CT55-201ENST00000276241 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
CT55-201ENST00000276241 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
CT55-201ENST00000276241 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
CT55-201ENST00000276241 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
CT55-201ENST00000276241 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
CT55-201ENST00000276241 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
CT55-201ENST00000276241 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
CT55-201ENST00000276241 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
CT55-201ENST00000276241 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
CT55-201ENST00000276241 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
CT55-201ENST00000276241 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
CT55-201ENST00000276241 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
CT55-201ENST00000276241 MT1AP04731 61 aa4.12□□□□□ -1.75
CT55-201ENST00000276241 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
CT55-201ENST00000276241 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
CT55-201ENST00000276241 LCE1EQ5T753 118 aa3.96□□□□□ -1.77
CT55-201ENST00000276241 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.77
CT55-201ENST00000276241 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
CT55-201ENST00000276241 A0A0A0MQY5 61 aa3.9□□□□□ -1.78
CT55-201ENST00000276241 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CT55-201ENST00000276241 MT3P25713 68 aa3.77□□□□□ -1.81
CT55-201ENST00000276241 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
CT55-201ENST00000276241 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
CT55-201ENST00000276241 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
CT55-201ENST00000276241 INE1O15225 51 aa3.62□□□□□ -1.83
CT55-201ENST00000276241 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
CT55-201ENST00000276241 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CT55-201ENST00000276241 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
CT55-201ENST00000276241 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
CT55-201ENST00000276241 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
CT55-201ENST00000276241 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
CT55-201ENST00000276241 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
CT55-201ENST00000276241 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CT55-201ENST00000276241 PRM1P04553 51 aa2.78□□□□□ -1.96
CT55-201ENST00000276241 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CT55-201ENST00000276241 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
CT55-201ENST00000276241 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CT55-201ENST00000276241 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CT55-201ENST00000276241 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 141.4 ms