RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 PLAC4Q8WY50 150 aa3.15□□□□□ -1.9
CD53-201ENST00000271324 NEBP20929 6669 aa3.12□□□□□ -1.91
CD53-201ENST00000271324 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
CD53-201ENST00000271324 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
CD53-201ENST00000271324 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
CD53-201ENST00000271324 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
CD53-201ENST00000271324 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
CD53-201ENST00000271324 R4GN34 69 aa3.07□□□□□ -1.92
CD53-201ENST00000271324 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
CD53-201ENST00000271324 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
CD53-201ENST00000271324 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
CD53-201ENST00000271324 KMT2DO14686 5537 aa2.95□□□□□ -1.94
CD53-201ENST00000271324 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
CD53-201ENST00000271324 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
CD53-201ENST00000271324 TNP1P09430 55 aa2.89□□□□□ -1.95
CD53-201ENST00000271324 MT1BP07438 61 aa2.88□□□□□ -1.95
CD53-201ENST00000271324 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
CD53-201ENST00000271324 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
CD53-201ENST00000271324 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
CD53-201ENST00000271324 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
CD53-201ENST00000271324 INE1O15225 51 aa2.84□□□□□ -1.95
CD53-201ENST00000271324 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
CD53-201ENST00000271324 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
CD53-201ENST00000271324 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
CD53-201ENST00000271324 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
CD53-201ENST00000271324 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
CD53-201ENST00000271324 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
CD53-201ENST00000271324 SPRR2EP22531 72 aa2.75□□□□□ -1.97
CD53-201ENST00000271324 SPRR2BP35325 72 aa2.75□□□□□ -1.97
CD53-201ENST00000271324 SPRR2AP35326 72 aa2.75□□□□□ -1.97
CD53-201ENST00000271324 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
CD53-201ENST00000271324 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
CD53-201ENST00000271324 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
CD53-201ENST00000271324 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
CD53-201ENST00000271324 MT1XP80297 61 aa2.66□□□□□ -1.98
CD53-201ENST00000271324 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
CD53-201ENST00000271324 SPRR2DP22532 72 aa2.65□□□□□ -1.99
CD53-201ENST00000271324 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
CD53-201ENST00000271324 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
CD53-201ENST00000271324 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
CD53-201ENST00000271324 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
CD53-201ENST00000271324 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CD53-201ENST00000271324 MT3P25713 68 aa2.48□□□□□ -2.01
CD53-201ENST00000271324 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
CD53-201ENST00000271324 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
CD53-201ENST00000271324 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
CD53-201ENST00000271324 MT4P47944 62 aa2.37□□□□□ -2.03
CD53-201ENST00000271324 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
CD53-201ENST00000271324 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
CD53-201ENST00000271324 MT1EP04732 61 aa2.36□□□□□ -2.03
CD53-201ENST00000271324 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
CD53-201ENST00000271324 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
CD53-201ENST00000271324 MT1GP13640 62 aa2.27□□□□□ -2.05
CD53-201ENST00000271324 MT1MQ8N339 61 aa2.27□□□□□ -2.05
CD53-201ENST00000271324 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CD53-201ENST00000271324 MT1LQ93083 61 aa2.22□□□□□ -2.05
CD53-201ENST00000271324 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CD53-201ENST00000271324 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
CD53-201ENST00000271324 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.07
CD53-201ENST00000271324 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
CD53-201ENST00000271324 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CD53-201ENST00000271324 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
CD53-201ENST00000271324 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
CD53-201ENST00000271324 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
CD53-201ENST00000271324 MT1AP04731 61 aa1.93□□□□□ -2.1
CD53-201ENST00000271324 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
CD53-201ENST00000271324 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
CD53-201ENST00000271324 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
CD53-201ENST00000271324 PRM1P04553 51 aa1.86□□□□□ -2.11
CD53-201ENST00000271324 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CD53-201ENST00000271324 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
CD53-201ENST00000271324 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
CD53-201ENST00000271324 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CD53-201ENST00000271324 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
CD53-201ENST00000271324 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
CD53-201ENST00000271324 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
CD53-201ENST00000271324 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms