RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
LCN1-201ENST00000263598 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
LCN1-201ENST00000263598 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
LCN1-201ENST00000263598 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
LCN1-201ENST00000263598 MT1EP04732 61 aa3.34□□□□□ -1.87
LCN1-201ENST00000263598 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
LCN1-201ENST00000263598 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
LCN1-201ENST00000263598 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
LCN1-201ENST00000263598 MT4P47944 62 aa3.3□□□□□ -1.88
LCN1-201ENST00000263598 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
LCN1-201ENST00000263598 A0A0D9SG42 100 aa3.28□□□□□ -1.88
LCN1-201ENST00000263598 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
LCN1-201ENST00000263598 MT1GP13640 62 aa3.27□□□□□ -1.89
LCN1-201ENST00000263598 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
LCN1-201ENST00000263598 H3BS24 57 aa3.26□□□□□ -1.89
LCN1-201ENST00000263598 SPINT4Q6UDR6 99 aa3.24□□□□□ -1.89
LCN1-201ENST00000263598 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
LCN1-201ENST00000263598 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
LCN1-201ENST00000263598 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
LCN1-201ENST00000263598 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
LCN1-201ENST00000263598 MT1MQ8N339 61 aa3.19□□□□□ -1.9
LCN1-201ENST00000263598 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
LCN1-201ENST00000263598 MT1LQ93083 61 aa3.16□□□□□ -1.9
LCN1-201ENST00000263598 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
LCN1-201ENST00000263598 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
LCN1-201ENST00000263598 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
LCN1-201ENST00000263598 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
LCN1-201ENST00000263598 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
LCN1-201ENST00000263598 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
LCN1-201ENST00000263598 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
LCN1-201ENST00000263598 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
LCN1-201ENST00000263598 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
LCN1-201ENST00000263598 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
LCN1-201ENST00000263598 TNP1P09430 55 aa3.01□□□□□ -1.93
LCN1-201ENST00000263598 LUZP6Q538Z0 58 aa3□□□□□ -1.93
LCN1-201ENST00000263598 KRTAP4-7Q9BYR0 210 aa2.98□□□□□ -1.93
LCN1-201ENST00000263598 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
LCN1-201ENST00000263598 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
LCN1-201ENST00000263598 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
LCN1-201ENST00000263598 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
LCN1-201ENST00000263598 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
LCN1-201ENST00000263598 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
LCN1-201ENST00000263598 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
LCN1-201ENST00000263598 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
LCN1-201ENST00000263598 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
LCN1-201ENST00000263598 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
LCN1-201ENST00000263598 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
LCN1-201ENST00000263598 INE1O15225 51 aa2.69□□□□□ -1.98
LCN1-201ENST00000263598 MT1AP04731 61 aa2.68□□□□□ -1.98
LCN1-201ENST00000263598 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
LCN1-201ENST00000263598 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
LCN1-201ENST00000263598 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
LCN1-201ENST00000263598 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
LCN1-201ENST00000263598 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
LCN1-201ENST00000263598 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
LCN1-201ENST00000263598 KRTAP9-4Q9BYQ2 154 aa2.63□□□□□ -1.99
LCN1-201ENST00000263598 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
LCN1-201ENST00000263598 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
LCN1-201ENST00000263598 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
LCN1-201ENST00000263598 MT3P25713 68 aa2.48□□□□□ -2.01
LCN1-201ENST00000263598 LCE1EQ5T753 118 aa2.34□□□□□ -2.03
LCN1-201ENST00000263598 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
LCN1-201ENST00000263598 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
LCN1-201ENST00000263598 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
LCN1-201ENST00000263598 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.07
LCN1-201ENST00000263598 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
LCN1-201ENST00000263598 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
LCN1-201ENST00000263598 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
LCN1-201ENST00000263598 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
LCN1-201ENST00000263598 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
LCN1-201ENST00000263598 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
LCN1-201ENST00000263598 PRM1P04553 51 aa1.77□□□□□ -2.13
LCN1-201ENST00000263598 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
LCN1-201ENST00000263598 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
LCN1-201ENST00000263598 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
LCN1-201ENST00000263598 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
LCN1-201ENST00000263598 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 40.1 ms