RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
TTC39A-201ENST00000262675 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
TTC39A-201ENST00000262675 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
TTC39A-201ENST00000262675 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
TTC39A-201ENST00000262675 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
TTC39A-201ENST00000262675 MT1XP80297 61 aa3.83□□□□□ -1.8
TTC39A-201ENST00000262675 SPRR2DP22532 72 aa3.82□□□□□ -1.8
TTC39A-201ENST00000262675 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
TTC39A-201ENST00000262675 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
TTC39A-201ENST00000262675 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
TTC39A-201ENST00000262675 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
TTC39A-201ENST00000262675 KRTAP4-8A0A0G2JLE6 195 aa3.68□□□□□ -1.82
TTC39A-201ENST00000262675 KRTAP4-8Q9BYQ9 185 aa3.68□□□□□ -1.82
TTC39A-201ENST00000262675 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
TTC39A-201ENST00000262675 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
TTC39A-201ENST00000262675 INE1O15225 51 aa3.51□□□□□ -1.85
TTC39A-201ENST00000262675 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
TTC39A-201ENST00000262675 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
TTC39A-201ENST00000262675 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
TTC39A-201ENST00000262675 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
TTC39A-201ENST00000262675 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.85
TTC39A-201ENST00000262675 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
TTC39A-201ENST00000262675 MT1EP04732 61 aa3.42□□□□□ -1.86
TTC39A-201ENST00000262675 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
TTC39A-201ENST00000262675 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
TTC39A-201ENST00000262675 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
TTC39A-201ENST00000262675 MT1GP13640 62 aa3.38□□□□□ -1.87
TTC39A-201ENST00000262675 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
TTC39A-201ENST00000262675 MT4P47944 62 aa3.31□□□□□ -1.88
TTC39A-201ENST00000262675 MT1LQ93083 61 aa3.28□□□□□ -1.88
TTC39A-201ENST00000262675 MT1MQ8N339 61 aa3.28□□□□□ -1.88
TTC39A-201ENST00000262675 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
TTC39A-201ENST00000262675 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
TTC39A-201ENST00000262675 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
TTC39A-201ENST00000262675 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
TTC39A-201ENST00000262675 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
TTC39A-201ENST00000262675 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
TTC39A-201ENST00000262675 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
TTC39A-201ENST00000262675 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
TTC39A-201ENST00000262675 KRTAP4-7Q9BYR0 210 aa3.17□□□□□ -1.9
TTC39A-201ENST00000262675 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
TTC39A-201ENST00000262675 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
TTC39A-201ENST00000262675 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
TTC39A-201ENST00000262675 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
TTC39A-201ENST00000262675 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
TTC39A-201ENST00000262675 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
TTC39A-201ENST00000262675 MT1AP04731 61 aa2.83□□□□□ -1.96
TTC39A-201ENST00000262675 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
TTC39A-201ENST00000262675 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TTC39A-201ENST00000262675 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
TTC39A-201ENST00000262675 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
TTC39A-201ENST00000262675 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
TTC39A-201ENST00000262675 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
TTC39A-201ENST00000262675 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
TTC39A-201ENST00000262675 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
TTC39A-201ENST00000262675 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
TTC39A-201ENST00000262675 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
TTC39A-201ENST00000262675 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
TTC39A-201ENST00000262675 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
TTC39A-201ENST00000262675 MT3P25713 68 aa2.58□□□□□ -2
TTC39A-201ENST00000262675 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
TTC39A-201ENST00000262675 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
TTC39A-201ENST00000262675 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
TTC39A-201ENST00000262675 PRM1P04553 51 aa2.45□□□□□ -2.02
TTC39A-201ENST00000262675 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
TTC39A-201ENST00000262675 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
TTC39A-201ENST00000262675 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
TTC39A-201ENST00000262675 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
TTC39A-201ENST00000262675 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
TTC39A-201ENST00000262675 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
TTC39A-201ENST00000262675 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
TTC39A-201ENST00000262675 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
TTC39A-201ENST00000262675 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
TTC39A-201ENST00000262675 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
TTC39A-201ENST00000262675 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TTC39A-201ENST00000262675 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
TTC39A-201ENST00000262675 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 34.3 ms