RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 KRTAP19-7Q3SYF9 63 aa5.75□□□□□ -1.49
APOA1-201ENST00000236850 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
APOA1-201ENST00000236850 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
APOA1-201ENST00000236850 MT1EP04732 61 aa5.72□□□□□ -1.49
APOA1-201ENST00000236850 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
APOA1-201ENST00000236850 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
APOA1-201ENST00000236850 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
APOA1-201ENST00000236850 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
APOA1-201ENST00000236850 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
APOA1-201ENST00000236850 MT1GP13640 62 aa5.59□□□□□ -1.51
APOA1-201ENST00000236850 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
APOA1-201ENST00000236850 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
APOA1-201ENST00000236850 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
APOA1-201ENST00000236850 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
APOA1-201ENST00000236850 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
APOA1-201ENST00000236850 MT1LQ93083 61 aa5.48□□□□□ -1.53
APOA1-201ENST00000236850 MT1MQ8N339 61 aa5.44□□□□□ -1.54
APOA1-201ENST00000236850 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
APOA1-201ENST00000236850 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
APOA1-201ENST00000236850 MT4P47944 62 aa5.34□□□□□ -1.55
APOA1-201ENST00000236850 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
APOA1-201ENST00000236850 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
APOA1-201ENST00000236850 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
APOA1-201ENST00000236850 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
APOA1-201ENST00000236850 H3BS24 57 aa5.23□□□□□ -1.57
APOA1-201ENST00000236850 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
APOA1-201ENST00000236850 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
APOA1-201ENST00000236850 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
APOA1-201ENST00000236850 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
APOA1-201ENST00000236850 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
APOA1-201ENST00000236850 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
APOA1-201ENST00000236850 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
APOA1-201ENST00000236850 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
APOA1-201ENST00000236850 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
APOA1-201ENST00000236850 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
APOA1-201ENST00000236850 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
APOA1-201ENST00000236850 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
APOA1-201ENST00000236850 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
APOA1-201ENST00000236850 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
APOA1-201ENST00000236850 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
APOA1-201ENST00000236850 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
APOA1-201ENST00000236850 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
APOA1-201ENST00000236850 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
APOA1-201ENST00000236850 MT1AP04731 61 aa4.68□□□□□ -1.66
APOA1-201ENST00000236850 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
APOA1-201ENST00000236850 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
APOA1-201ENST00000236850 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
APOA1-201ENST00000236850 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
APOA1-201ENST00000236850 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
APOA1-201ENST00000236850 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
APOA1-201ENST00000236850 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
APOA1-201ENST00000236850 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
APOA1-201ENST00000236850 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
APOA1-201ENST00000236850 MT3P25713 68 aa4.31□□□□□ -1.72
APOA1-201ENST00000236850 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
APOA1-201ENST00000236850 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
APOA1-201ENST00000236850 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
APOA1-201ENST00000236850 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
APOA1-201ENST00000236850 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
APOA1-201ENST00000236850 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
APOA1-201ENST00000236850 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
APOA1-201ENST00000236850 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
APOA1-201ENST00000236850 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
APOA1-201ENST00000236850 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
APOA1-201ENST00000236850 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
APOA1-201ENST00000236850 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
APOA1-201ENST00000236850 INE1O15225 51 aa3.33□□□□□ -1.88
APOA1-201ENST00000236850 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
APOA1-201ENST00000236850 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
APOA1-201ENST00000236850 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
APOA1-201ENST00000236850 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
APOA1-201ENST00000236850 PRM1P04553 51 aa3.04□□□□□ -1.92
APOA1-201ENST00000236850 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
APOA1-201ENST00000236850 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
APOA1-201ENST00000236850 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
APOA1-201ENST00000236850 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
APOA1-201ENST00000236850 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms