RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 LCE3BQ5TA77 95 aa8.72□□□□□ -1.01
HOMER3-201ENST00000221222 ROMO1P60602 79 aa8.68□□□□□ -1.02
HOMER3-201ENST00000221222 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
HOMER3-201ENST00000221222 KRTAP23-1A1A580 65 aa8.57□□□□□ -1.04
HOMER3-201ENST00000221222 KRTAP19-3Q7Z4W3 81 aa8.56□□□□□ -1.04
HOMER3-201ENST00000221222 LCE5AQ5TCM9 118 aa8.51□□□□□ -1.05
HOMER3-201ENST00000221222 KRTAP12-3P60328 96 aa8.5□□□□□ -1.05
HOMER3-201ENST00000221222 MT1LQ93083 61 aa8.45□□□□□ -1.06
HOMER3-201ENST00000221222 MT1GP13640 62 aa8.42□□□□□ -1.06
HOMER3-201ENST00000221222 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
HOMER3-201ENST00000221222 MT1MQ8N339 61 aa8.27□□□□□ -1.09
HOMER3-201ENST00000221222 DSTQ03001 7570 aaKnown RBP8.25□□□□□ -1.09
HOMER3-201ENST00000221222 KRTAP4-9Q9BYQ8 210 aa8.22□□□□□ -1.09
HOMER3-201ENST00000221222 GPR98Q8WXG9 6306 aa8.22□□□□□ -1.09
HOMER3-201ENST00000221222 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
HOMER3-201ENST00000221222 PMAIP1Q13794 54 aa8.12□□□□□ -1.11
HOMER3-201ENST00000221222 KRTAP19-4Q3LI73 84 aa8.1□□□□□ -1.11
HOMER3-201ENST00000221222 KRTAP4-3Q9BYR4 195 aa8.04□□□□□ -1.12
HOMER3-201ENST00000221222 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
HOMER3-201ENST00000221222 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
HOMER3-201ENST00000221222 LCE1DQ5T752 114 aa7.97□□□□□ -1.13
HOMER3-201ENST00000221222 LCE3CQ5T5A8 94 aa7.89□□□□□ -1.15
HOMER3-201ENST00000221222 MT4P47944 62 aa7.88□□□□□ -1.15
HOMER3-201ENST00000221222 HMCN1Q96RW7 5635 aa7.84□□□□□ -1.16
HOMER3-201ENST00000221222 LCE4AQ5TA78 99 aa7.83□□□□□ -1.16
HOMER3-201ENST00000221222 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
HOMER3-201ENST00000221222 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
HOMER3-201ENST00000221222 KRTAP5-4Q6L8H1 288 aa7.63□□□□□ -1.19
HOMER3-201ENST00000221222 KRTAP4-6Q9BYQ5 205 aa7.6□□□□□ -1.19
HOMER3-201ENST00000221222 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.2
HOMER3-201ENST00000221222 KRTAP5-5Q701N2 237 aaPredicted RBP7.56□□□□□ -1.2
HOMER3-201ENST00000221222 KTN1-AS1Q86SY8 53 aa7.55□□□□□ -1.2
HOMER3-201ENST00000221222 KRTAP5-10Q6L8G5 202 aa7.48□□□□□ -1.21
HOMER3-201ENST00000221222 KRTAP9-6A8MVA2 160 aa7.44□□□□□ -1.22
HOMER3-201ENST00000221222 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
HOMER3-201ENST00000221222 KRTAP20-2Q3LI61 65 aa7.27□□□□□ -1.25
HOMER3-201ENST00000221222 KRTAP5-7Q6L8G8 165 aa7.21□□□□□ -1.25
HOMER3-201ENST00000221222 MT1AP04731 61 aa7.2□□□□□ -1.26
HOMER3-201ENST00000221222 KRTAP12-4P60329 112 aa7.2□□□□□ -1.26
HOMER3-201ENST00000221222 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.26
HOMER3-201ENST00000221222 SYNE1Q8NF91 8797 aaKnown RBP7.15□□□□□ -1.27
HOMER3-201ENST00000221222 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
HOMER3-201ENST00000221222 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
HOMER3-201ENST00000221222 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.31
HOMER3-201ENST00000221222 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
HOMER3-201ENST00000221222 KRTAP6-2Q3LI66 62 aa6.69□□□□□ -1.34
HOMER3-201ENST00000221222 KRTAP4-11Q9BYQ6 195 aa6.69□□□□□ -1.34
HOMER3-201ENST00000221222 MT3P25713 68 aa6.55□□□□□ -1.36
HOMER3-201ENST00000221222 KRTAP5-8O75690 187 aa6.46□□□□□ -1.37
HOMER3-201ENST00000221222 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
HOMER3-201ENST00000221222 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
HOMER3-201ENST00000221222 MUC5BQ9HC84 5762 aaPredicted RBP6.34□□□□□ -1.39
HOMER3-201ENST00000221222 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
HOMER3-201ENST00000221222 OBSCNQ5VST9 7968 aa6.27□□□□□ -1.41
HOMER3-201ENST00000221222 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
HOMER3-201ENST00000221222 KRTAP5-1Q6L8H4 278 aa6.02□□□□□ -1.45
HOMER3-201ENST00000221222 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
HOMER3-201ENST00000221222 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
HOMER3-201ENST00000221222 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
HOMER3-201ENST00000221222 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
HOMER3-201ENST00000221222 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
HOMER3-201ENST00000221222 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
HOMER3-201ENST00000221222 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
HOMER3-201ENST00000221222 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
HOMER3-201ENST00000221222 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
HOMER3-201ENST00000221222 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
HOMER3-201ENST00000221222 A0A0A0MQY5 61 aa4.77□□□□□ -1.65
HOMER3-201ENST00000221222 KRTAP21-2Q3LI59 83 aa4.69□□□□□ -1.66
HOMER3-201ENST00000221222 INE1O15225 51 aa4.68□□□□□ -1.66
HOMER3-201ENST00000221222 LCE1FQ5T754 118 aa4.65□□□□□ -1.66
HOMER3-201ENST00000221222 PRM1P04553 51 aa4.46□□□□□ -1.7
HOMER3-201ENST00000221222 PHGR1C9JFL3 82 aa4.4□□□□□ -1.7
HOMER3-201ENST00000221222 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
HOMER3-201ENST00000221222 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
HOMER3-201ENST00000221222 H3BS24 57 aa3.77□□□□□ -1.81
HOMER3-201ENST00000221222 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
HOMER3-201ENST00000221222 MUC16Q8WXI7 14507 aa2.79□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms