RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MT1HP80294 61 aa0.22□□□□□ -2.37
CCDC7-216ENST00000640058 MGAQ8IWI9 3026 aa0.22□□□□□ -2.37
CCDC7-216ENST00000640058 DCHS2Q6V1P9 2916 aa0.22□□□□□ -2.37
CCDC7-216ENST00000640058 TLN2Q9Y4G6 2542 aa0.22□□□□□ -2.37
CCDC7-216ENST00000640058 LRP1Q07954 4544 aaKnown RBP0.22□□□□□ -2.37
CCDC7-216ENST00000640058 ZANQ9Y493 2812 aa0.22□□□□□ -2.37
CCDC7-216ENST00000640058 TGP01266 2768 aa0.22□□□□□ -2.37
CCDC7-216ENST00000640058 ZZEF1O43149 2961 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 MYCBP2O75592 4640 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 CUBNO60494 3623 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 MT1EP04732 61 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 TACC2O95359 2948 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 KMT2AQ03164 3969 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 HRNRQ86YZ3 2850 aaPredicted RBP0.21□□□□□ -2.38
CCDC7-216ENST00000640058 ZFHX4Q86UP3 3567 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
CCDC7-216ENST00000640058 CEP250Q9BV73 2442 aa0.21□□□□□ -2.38
CCDC7-216ENST00000640058 MGAM2Q2M2H8 2515 aa0.2□□□□□ -2.38
CCDC7-216ENST00000640058 HUWE1Q7Z6Z7 4374 aaKnown RBP0.2□□□□□ -2.38
CCDC7-216ENST00000640058 NBEAQ8NFP9 2946 aa0.2□□□□□ -2.38
CCDC7-216ENST00000640058 MT1LQ93083 61 aa0.2□□□□□ -2.38
CCDC7-216ENST00000640058 VPS13BQ7Z7G8 4022 aa0.2□□□□□ -2.38
CCDC7-216ENST00000640058 TRIOO75962 3097 aa0.2□□□□□ -2.38
CCDC7-216ENST00000640058 DNAH11Q96DT5 4516 aa0.2□□□□□ -2.38
CCDC7-216ENST00000640058 PRKDCP78527 4128 aaKnown RBP0.19□□□□□ -2.38
CCDC7-216ENST00000640058 TEP1Q99973 2627 aaKnown RBP0.19□□□□□ -2.38
CCDC7-216ENST00000640058 MUC5ACP98088 5654 aa0.19□□□□□ -2.38
CCDC7-216ENST00000640058 FASNP49327 2511 aaKnown RBP0.19□□□□□ -2.38
CCDC7-216ENST00000640058 KMT2DO14686 5537 aa0.19□□□□□ -2.38
CCDC7-216ENST00000640058 HSPG2P98160 4391 aa0.19□□□□□ -2.38
CCDC7-216ENST00000640058 MYO18BQ8IUG5 2567 aa0.19□□□□□ -2.38
CCDC7-216ENST00000640058 ANK3Q12955 4377 aaKnown RBP0.19□□□□□ -2.38
CCDC7-216ENST00000640058 HIVEP1P15822 2718 aa0.18□□□□□ -2.38
CCDC7-216ENST00000640058 MXRA5Q9NR99 2828 aa0.18□□□□□ -2.38
CCDC7-216ENST00000640058 LAMA5O15230 3695 aa0.18□□□□□ -2.38
CCDC7-216ENST00000640058 DYNC2H1Q8NCM8 4307 aaKnown RBP0.18□□□□□ -2.38
CCDC7-216ENST00000640058 LPAP08519 4548 aa0.18□□□□□ -2.38
CCDC7-216ENST00000640058 SPENQ96T58 3664 aaKnown RBP0.18□□□□□ -2.38
CCDC7-216ENST00000640058 FLNAP21333 2647 aaKnown RBP0.17□□□□□ -2.38
CCDC7-216ENST00000640058 USP9XQ93008 2570 aaPredicted RBP0.17□□□□□ -2.38
CCDC7-216ENST00000640058 LAMA1P25391 3075 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 ITPR1Q14643 2758 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 PKHD1L1Q86WI1 4243 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 WDR87Q6ZQQ6 2873 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 DNAH3Q8TD57 4116 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 NBPF19A0A087WUL8 3843 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 TEX15Q9BXT5 2789 aa0.17□□□□□ -2.38
CCDC7-216ENST00000640058 SPTAN1Q13813 2472 aaKnown RBP0.16□□□□□ -2.38
CCDC7-216ENST00000640058 NIPBLQ6KC79 2804 aaeCLIP0.16□□□□□ -2.38
CCDC7-216ENST00000640058 DNAH2Q9P225 4427 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 MT1XP80297 61 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 KALRNO60229 2985 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 CFAP54Q96N23 3096 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 LAMA3Q16787 3333 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 COL6A3P12111 3177 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 FLGP20930 4061 aaPredicted RBP0.16□□□□□ -2.38
CCDC7-216ENST00000640058 DMXL2Q8TDJ6 3036 aa0.16□□□□□ -2.38
CCDC7-216ENST00000640058 DOPEY1Q5JWR5 2465 aa0.15□□□□□ -2.38
CCDC7-216ENST00000640058 CFAP46Q8IYW2 2715 aa0.15□□□□□ -2.38
CCDC7-216ENST00000640058 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 FRYLO94915 3013 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 HTTP42858 3142 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 LRP1BQ9NZR2 4599 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 PKD1P98161 4303 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH8Q96JB1 4490 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 CSMD1Q96PZ7 3565 aa0.15□□□□□ -2.39
CCDC7-216ENST00000640058 CENPEQ02224 2701 aa0.14□□□□□ -2.39
CCDC7-216ENST00000640058 ADGRG4Q8IZF6 3080 aa0.14□□□□□ -2.39
CCDC7-216ENST00000640058 AKAP9Q99996 3911 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 LRBAP50851 2863 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 RELNP78509 3460 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH9Q9NYC9 4486 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 PRUNE2Q8WUY3 3088 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH10Q8IVF4 4471 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH6Q9C0G6 4158 aa0.13□□□□□ -2.39
CCDC7-216ENST00000640058 SPTBN5Q9NRC6 3674 aaKnown RBP0.12□□□□□ -2.39
CCDC7-216ENST00000640058 FAT1Q14517 4588 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 TLN1Q9Y490 2541 aaKnown RBP0.12□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH7Q8WXX0 4024 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 KRTAP19-8Q3LI54 63 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 FAT3Q8TDW7 4589 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 MAP1AP78559 2803 aaPredicted RBP0.12□□□□□ -2.39
CCDC7-216ENST00000640058 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
CCDC7-216ENST00000640058 CEP295Q9C0D2 2601 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 ATMQ13315 3056 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH12Q6ZR08 3092 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 CMYA5Q8N3K9 4069 aa0.12□□□□□ -2.39
CCDC7-216ENST00000640058 STAB2Q8WWQ8 2551 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 DNAH1Q9P2D7 4330 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 MT2AP02795 61 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 MT1HL1P0DM35 61 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 MT1GP13640 62 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 C5orf42Q9H799 3197 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 ITPR2Q14571 2701 aa0.11□□□□□ -2.39
CCDC7-216ENST00000640058 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms