RNA–Protein interactions for RNA: ENST00000639913.1

KCNMA1-273, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 12,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-273ENST00000639913 RYR1P21817 5038 aa3.54□□□□□ -1.84
KCNMA1-273ENST00000639913 CUBNO60494 3623 aa3.52□□□□□ -1.85
KCNMA1-273ENST00000639913 LAMA5O15230 3695 aa3.52□□□□□ -1.85
KCNMA1-273ENST00000639913 DYNC1H1Q14204 4646 aaKnown RBP3.52□□□□□ -1.85
KCNMA1-273ENST00000639913 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
KCNMA1-273ENST00000639913 DNAH9Q9NYC9 4486 aa3.49□□□□□ -1.85
KCNMA1-273ENST00000639913 DNHD1Q96M86 4753 aa3.48□□□□□ -1.85
KCNMA1-273ENST00000639913 VPS13CQ709C8 3753 aa3.46□□□□□ -1.86
KCNMA1-273ENST00000639913 FAT1Q14517 4588 aa3.46□□□□□ -1.86
KCNMA1-273ENST00000639913 VPS13DQ5THJ4 4388 aa3.44□□□□□ -1.86
KCNMA1-273ENST00000639913 SACSQ9NZJ4 4579 aa3.44□□□□□ -1.86
KCNMA1-273ENST00000639913 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
KCNMA1-273ENST00000639913 RYR3Q15413 4870 aa3.43□□□□□ -1.86
KCNMA1-273ENST00000639913 SPENQ96T58 3664 aaKnown RBP3.42□□□□□ -1.86
KCNMA1-273ENST00000639913 MT2AP02795 61 aa3.41□□□□□ -1.86
KCNMA1-273ENST00000639913 ASPMQ8IZT6 3477 aa3.4□□□□□ -1.87
KCNMA1-273ENST00000639913 AKAP9Q99996 3911 aa3.39□□□□□ -1.87
KCNMA1-273ENST00000639913 APOBP04114 4563 aaKnown RBP3.38□□□□□ -1.87
KCNMA1-273ENST00000639913 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
KCNMA1-273ENST00000639913 BSNQ9UPA5 3926 aa3.38□□□□□ -1.87
KCNMA1-273ENST00000639913 SVEP1Q4LDE5 3571 aa3.38□□□□□ -1.87
KCNMA1-273ENST00000639913 MT1FP04733 61 aa3.38□□□□□ -1.87
KCNMA1-273ENST00000639913 MT1HP80294 61 aa3.37□□□□□ -1.87
KCNMA1-273ENST00000639913 DNAH8Q96JB1 4490 aa3.37□□□□□ -1.87
KCNMA1-273ENST00000639913 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
KCNMA1-273ENST00000639913 CSMD3Q7Z407 3707 aa3.35□□□□□ -1.87
KCNMA1-273ENST00000639913 LRP1Q07954 4544 aaKnown RBP3.32□□□□□ -1.88
KCNMA1-273ENST00000639913 HERC1Q15751 4861 aa3.31□□□□□ -1.88
KCNMA1-273ENST00000639913 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
KCNMA1-273ENST00000639913 MUC3AQ02505 3323 aa3.29□□□□□ -1.88
KCNMA1-273ENST00000639913 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.88
KCNMA1-273ENST00000639913 KRTAP17-1Q9BYP8 105 aa3.26□□□□□ -1.89
KCNMA1-273ENST00000639913 DYNC2H1Q8NCM8 4307 aaKnown RBP3.26□□□□□ -1.89
KCNMA1-273ENST00000639913 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
KCNMA1-273ENST00000639913 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
KCNMA1-273ENST00000639913 RYR2Q92736 4967 aa3.25□□□□□ -1.89
KCNMA1-273ENST00000639913 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
KCNMA1-273ENST00000639913 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
KCNMA1-273ENST00000639913 FAT2Q9NYQ8 4349 aa3.22□□□□□ -1.89
KCNMA1-273ENST00000639913 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
KCNMA1-273ENST00000639913 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
KCNMA1-273ENST00000639913 ZNF469Q96JG9 3925 aaPredicted RBP3.21□□□□□ -1.9
KCNMA1-273ENST00000639913 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
KCNMA1-273ENST00000639913 PCLOQ9Y6V0 5065 aa3.2□□□□□ -1.9
KCNMA1-273ENST00000639913 MYCBP2O75592 4640 aa3.19□□□□□ -1.9
KCNMA1-273ENST00000639913 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
KCNMA1-273ENST00000639913 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
KCNMA1-273ENST00000639913 ANK2Q01484 3957 aa3.14□□□□□ -1.91
KCNMA1-273ENST00000639913 LCE3BQ5TA77 95 aa3.13□□□□□ -1.91
KCNMA1-273ENST00000639913 MT1XP80297 61 aa3.12□□□□□ -1.91
KCNMA1-273ENST00000639913 HSPG2P98160 4391 aa3.12□□□□□ -1.91
KCNMA1-273ENST00000639913 KRTAP19-1Q8IUB9 90 aa3.12□□□□□ -1.91
KCNMA1-273ENST00000639913 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
KCNMA1-273ENST00000639913 HECTD4Q9Y4D8 3996 aa3.1□□□□□ -1.91
KCNMA1-273ENST00000639913 PKD1P98161 4303 aa3.1□□□□□ -1.91
KCNMA1-273ENST00000639913 MT1GP13640 62 aa3.1□□□□□ -1.91
KCNMA1-273ENST00000639913 DNAH6Q9C0G6 4158 aa3.09□□□□□ -1.92
KCNMA1-273ENST00000639913 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
KCNMA1-273ENST00000639913 PRKDCP78527 4128 aaKnown RBP3.08□□□□□ -1.92
KCNMA1-273ENST00000639913 MT1BP07438 61 aa3.05□□□□□ -1.92
KCNMA1-273ENST00000639913 EPPK1P58107 5090 aaKnown RBP3.05□□□□□ -1.92
KCNMA1-273ENST00000639913 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
KCNMA1-273ENST00000639913 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
KCNMA1-273ENST00000639913 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
KCNMA1-273ENST00000639913 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
KCNMA1-273ENST00000639913 HERC2O95714 4834 aa3.03□□□□□ -1.92
KCNMA1-273ENST00000639913 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
KCNMA1-273ENST00000639913 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.92
KCNMA1-273ENST00000639913 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
KCNMA1-273ENST00000639913 RNF213Q63HN8 5207 aa3□□□□□ -1.93
KCNMA1-273ENST00000639913 LYSTQ99698 3801 aa3□□□□□ -1.93
KCNMA1-273ENST00000639913 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
KCNMA1-273ENST00000639913 SPRR2EP22531 72 aa2.96□□□□□ -1.94
KCNMA1-273ENST00000639913 SPRR2BP35325 72 aa2.96□□□□□ -1.94
KCNMA1-273ENST00000639913 SPRR2AP35326 72 aa2.96□□□□□ -1.94
KCNMA1-273ENST00000639913 KMT2CQ8NEZ4 4911 aaKnown RBP2.94□□□□□ -1.94
KCNMA1-273ENST00000639913 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
KCNMA1-273ENST00000639913 KRTAP9-8Q9BYQ0 159 aa2.93□□□□□ -1.94
KCNMA1-273ENST00000639913 LCE2CQ5TA81 110 aa2.92□□□□□ -1.94
KCNMA1-273ENST00000639913 KMT2AQ03164 3969 aa2.92□□□□□ -1.94
KCNMA1-273ENST00000639913 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
KCNMA1-273ENST00000639913 ABCA13Q86UQ4 5058 aa2.9□□□□□ -1.95
KCNMA1-273ENST00000639913 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
KCNMA1-273ENST00000639913 SPRR2DP22532 72 aa2.85□□□□□ -1.95
KCNMA1-273ENST00000639913 LRP2P98164 4655 aa2.85□□□□□ -1.95
KCNMA1-273ENST00000639913 LOC100996750A0A140TA64 210 aa2.84□□□□□ -1.95
KCNMA1-273ENST00000639913 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
KCNMA1-273ENST00000639913 MT1LQ93083 61 aa2.83□□□□□ -1.96
KCNMA1-273ENST00000639913 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
KCNMA1-273ENST00000639913 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
KCNMA1-273ENST00000639913 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
KCNMA1-273ENST00000639913 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
KCNMA1-273ENST00000639913 KRTAP19-4Q3LI73 84 aa2.8□□□□□ -1.96
KCNMA1-273ENST00000639913 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
KCNMA1-273ENST00000639913 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
KCNMA1-273ENST00000639913 LCE2BO14633 110 aa2.79□□□□□ -1.96
KCNMA1-273ENST00000639913 MT1EP04732 61 aa2.77□□□□□ -1.97
KCNMA1-273ENST00000639913 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
KCNMA1-273ENST00000639913 PRM1P04553 51 aa2.73□□□□□ -1.97
KCNMA1-273ENST00000639913 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms