RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
HNRNPU-219ENST00000639628 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
HNRNPU-219ENST00000639628 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
HNRNPU-219ENST00000639628 DNAH5Q8TE73 4624 aa4.11□□□□□ -1.75
HNRNPU-219ENST00000639628 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
HNRNPU-219ENST00000639628 ANK2Q01484 3957 aa4.06□□□□□ -1.76
HNRNPU-219ENST00000639628 DNAH2Q9P225 4427 aa4.06□□□□□ -1.76
HNRNPU-219ENST00000639628 CMYA5Q8N3K9 4069 aa4.04□□□□□ -1.76
HNRNPU-219ENST00000639628 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
HNRNPU-219ENST00000639628 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
HNRNPU-219ENST00000639628 DNHD1Q96M86 4753 aa4□□□□□ -1.77
HNRNPU-219ENST00000639628 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
HNRNPU-219ENST00000639628 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
HNRNPU-219ENST00000639628 DYNC2H1Q8NCM8 4307 aaKnown RBP3.99□□□□□ -1.77
HNRNPU-219ENST00000639628 KMT2AQ03164 3969 aa3.99□□□□□ -1.77
HNRNPU-219ENST00000639628 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
HNRNPU-219ENST00000639628 INE1O15225 51 aa3.94□□□□□ -1.78
HNRNPU-219ENST00000639628 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
HNRNPU-219ENST00000639628 FAT1Q14517 4588 aa3.93□□□□□ -1.78
HNRNPU-219ENST00000639628 LYSTQ99698 3801 aa3.91□□□□□ -1.78
HNRNPU-219ENST00000639628 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
HNRNPU-219ENST00000639628 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
HNRNPU-219ENST00000639628 VPS13BQ7Z7G8 4022 aa3.9□□□□□ -1.78
HNRNPU-219ENST00000639628 HECTD4Q9Y4D8 3996 aa3.9□□□□□ -1.78
HNRNPU-219ENST00000639628 FRAS1Q86XX4 4008 aa3.9□□□□□ -1.79
HNRNPU-219ENST00000639628 FAT2Q9NYQ8 4349 aa3.89□□□□□ -1.79
HNRNPU-219ENST00000639628 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
HNRNPU-219ENST00000639628 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
HNRNPU-219ENST00000639628 DNAH7Q8WXX0 4024 aa3.87□□□□□ -1.79
HNRNPU-219ENST00000639628 LORP23490 312 aaPredicted RBP3.81□□□□□ -1.8
HNRNPU-219ENST00000639628 APOBP04114 4563 aaKnown RBP3.76□□□□□ -1.81
HNRNPU-219ENST00000639628 RYR1P21817 5038 aa3.74□□□□□ -1.81
HNRNPU-219ENST00000639628 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
HNRNPU-219ENST00000639628 HYDINQ4G0P3 5121 aa3.72□□□□□ -1.81
HNRNPU-219ENST00000639628 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
HNRNPU-219ENST00000639628 KIAA1109Q2LD37 5005 aa3.68□□□□□ -1.82
HNRNPU-219ENST00000639628 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
HNRNPU-219ENST00000639628 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
HNRNPU-219ENST00000639628 RYR2Q92736 4967 aa3.66□□□□□ -1.82
HNRNPU-219ENST00000639628 RYR3Q15413 4870 aa3.65□□□□□ -1.83
HNRNPU-219ENST00000639628 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
HNRNPU-219ENST00000639628 KRTAP17-1Q9BYP8 105 aa3.64□□□□□ -1.83
HNRNPU-219ENST00000639628 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
HNRNPU-219ENST00000639628 PKD1P98161 4303 aa3.62□□□□□ -1.83
HNRNPU-219ENST00000639628 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
HNRNPU-219ENST00000639628 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
HNRNPU-219ENST00000639628 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
HNRNPU-219ENST00000639628 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
HNRNPU-219ENST00000639628 HSPG2P98160 4391 aa3.54□□□□□ -1.84
HNRNPU-219ENST00000639628 MT1HP80294 61 aa3.52□□□□□ -1.85
HNRNPU-219ENST00000639628 LRP2P98164 4655 aa3.51□□□□□ -1.85
HNRNPU-219ENST00000639628 MT2AP02795 61 aa3.49□□□□□ -1.85
HNRNPU-219ENST00000639628 TNXBP22105 4242 aa3.46□□□□□ -1.86
HNRNPU-219ENST00000639628 KMT2CQ8NEZ4 4911 aaKnown RBP3.45□□□□□ -1.86
HNRNPU-219ENST00000639628 MT1FP04733 61 aa3.44□□□□□ -1.86
HNRNPU-219ENST00000639628 HERC2O95714 4834 aa3.43□□□□□ -1.86
HNRNPU-219ENST00000639628 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
HNRNPU-219ENST00000639628 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.86
HNRNPU-219ENST00000639628 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
HNRNPU-219ENST00000639628 LPAP08519 4548 aa3.36□□□□□ -1.87
HNRNPU-219ENST00000639628 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
HNRNPU-219ENST00000639628 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.88
HNRNPU-219ENST00000639628 MT3P25713 68 aa3.33□□□□□ -1.88
HNRNPU-219ENST00000639628 BIRC6Q9NR09 4857 aa3.32□□□□□ -1.88
HNRNPU-219ENST00000639628 LCE2CQ5TA81 110 aa3.31□□□□□ -1.88
HNRNPU-219ENST00000639628 HERC1Q15751 4861 aa3.29□□□□□ -1.88
HNRNPU-219ENST00000639628 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
HNRNPU-219ENST00000639628 KRTAP9-8Q9BYQ0 159 aa3.27□□□□□ -1.89
HNRNPU-219ENST00000639628 MT1XP80297 61 aa3.25□□□□□ -1.89
HNRNPU-219ENST00000639628 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
HNRNPU-219ENST00000639628 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
HNRNPU-219ENST00000639628 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
HNRNPU-219ENST00000639628 MT1BP07438 61 aa3.24□□□□□ -1.89
HNRNPU-219ENST00000639628 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
HNRNPU-219ENST00000639628 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
HNRNPU-219ENST00000639628 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
HNRNPU-219ENST00000639628 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
HNRNPU-219ENST00000639628 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
HNRNPU-219ENST00000639628 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
HNRNPU-219ENST00000639628 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
HNRNPU-219ENST00000639628 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
HNRNPU-219ENST00000639628 LCE2BO14633 110 aa3.19□□□□□ -1.9
HNRNPU-219ENST00000639628 KRTAP9-3Q9BYQ3 159 aa3.16□□□□□ -1.9
HNRNPU-219ENST00000639628 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
HNRNPU-219ENST00000639628 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
HNRNPU-219ENST00000639628 KRTAP4-8A0A0G2JLE6 195 aa3.02□□□□□ -1.93
HNRNPU-219ENST00000639628 KRTAP4-8Q9BYQ9 185 aa3.02□□□□□ -1.93
HNRNPU-219ENST00000639628 FAT4Q6V0I7 4981 aa3.02□□□□□ -1.93
HNRNPU-219ENST00000639628 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
HNRNPU-219ENST00000639628 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
HNRNPU-219ENST00000639628 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
HNRNPU-219ENST00000639628 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
HNRNPU-219ENST00000639628 MUC2Q02817 5179 aa2.96□□□□□ -1.94
HNRNPU-219ENST00000639628 LCE2AQ5TA79 106 aaPredicted RBP2.92□□□□□ -1.94
HNRNPU-219ENST00000639628 UBR4Q5T4S7 5183 aa2.91□□□□□ -1.94
HNRNPU-219ENST00000639628 MT1LQ93083 61 aa2.89□□□□□ -1.95
HNRNPU-219ENST00000639628 MT1GP13640 62 aa2.89□□□□□ -1.95
HNRNPU-219ENST00000639628 MT1EP04732 61 aa2.88□□□□□ -1.95
HNRNPU-219ENST00000639628 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
HNRNPU-219ENST00000639628 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms