RNA–Protein interactions for RNA: ENST00000639478.1

CACNA1H-211, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 5

Gene CACNA1H, Length 7,992 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-211ENST00000639478 HUWE1Q7Z6Z7 4374 aaKnown RBP9.27□□□□□ -0.93
CACNA1H-211ENST00000639478 LCE3AQ5TA76 89 aa9.25□□□□□ -0.93
CACNA1H-211ENST00000639478 LYSTQ99698 3801 aa9.13□□□□□ -0.95
CACNA1H-211ENST00000639478 DNAH2Q9P225 4427 aa9.06□□□□□ -0.96
CACNA1H-211ENST00000639478 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
CACNA1H-211ENST00000639478 MT1HL1P0DM35 61 aa9.01□□□□□ -0.97
CACNA1H-211ENST00000639478 ANK2Q01484 3957 aa8.94□□□□□ -0.98
CACNA1H-211ENST00000639478 KMT2AQ03164 3969 aa8.91□□□□□ -0.98
CACNA1H-211ENST00000639478 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
CACNA1H-211ENST00000639478 CMYA5Q8N3K9 4069 aa8.87□□□□□ -0.99
CACNA1H-211ENST00000639478 DNAH3Q8TD57 4116 aa8.87□□□□□ -0.99
CACNA1H-211ENST00000639478 VPS13BQ7Z7G8 4022 aa8.86□□□□□ -0.99
CACNA1H-211ENST00000639478 KRTAP8-1Q8IUC2 63 aa8.84□□□□□ -0.99
CACNA1H-211ENST00000639478 KRTAP4-5Q9BYR2 181 aa8.71□□□□□ -1.02
CACNA1H-211ENST00000639478 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
CACNA1H-211ENST00000639478 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
CACNA1H-211ENST00000639478 DNAH10Q8IVF4 4471 aa8.63□□□□□ -1.03
CACNA1H-211ENST00000639478 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
CACNA1H-211ENST00000639478 HECTD4Q9Y4D8 3996 aa8.58□□□□□ -1.04
CACNA1H-211ENST00000639478 DNAH8Q96JB1 4490 aa8.39□□□□□ -1.07
CACNA1H-211ENST00000639478 DNAH9Q9NYC9 4486 aa8.34□□□□□ -1.07
CACNA1H-211ENST00000639478 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
CACNA1H-211ENST00000639478 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
CACNA1H-211ENST00000639478 KRTAP19-5Q3LI72 72 aa8.16□□□□□ -1.1
CACNA1H-211ENST00000639478 LCE3CQ5T5A8 94 aa8.15□□□□□ -1.11
CACNA1H-211ENST00000639478 FAT2Q9NYQ8 4349 aa8.14□□□□□ -1.11
CACNA1H-211ENST00000639478 SPRR2FQ96RM1 72 aa8.13□□□□□ -1.11
CACNA1H-211ENST00000639478 KRTAP4-1Q9BYQ7 146 aa8.08□□□□□ -1.12
CACNA1H-211ENST00000639478 PRKDCP78527 4128 aaKnown RBP8.07□□□□□ -1.12
CACNA1H-211ENST00000639478 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
CACNA1H-211ENST00000639478 MT1HP80294 61 aa8.03□□□□□ -1.12
CACNA1H-211ENST00000639478 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
CACNA1H-211ENST00000639478 VPS13DQ5THJ4 4388 aa7.94□□□□□ -1.14
CACNA1H-211ENST00000639478 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
CACNA1H-211ENST00000639478 DNAH17Q9UFH2 4485 aa7.93□□□□□ -1.14
CACNA1H-211ENST00000639478 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
CACNA1H-211ENST00000639478 PLECQ15149 4684 aaKnown RBP7.88□□□□□ -1.15
CACNA1H-211ENST00000639478 MT2AP02795 61 aa7.88□□□□□ -1.15
CACNA1H-211ENST00000639478 LCE3BQ5TA77 95 aa7.87□□□□□ -1.15
CACNA1H-211ENST00000639478 STARD9Q9P2P6 4700 aa7.85□□□□□ -1.15
CACNA1H-211ENST00000639478 MT1FP04733 61 aa7.76□□□□□ -1.17
CACNA1H-211ENST00000639478 KRTAP12-4P60329 112 aa7.74□□□□□ -1.17
CACNA1H-211ENST00000639478 DNAH5Q8TE73 4624 aa7.68□□□□□ -1.18
CACNA1H-211ENST00000639478 SPRR2EP22531 72 aa7.59□□□□□ -1.19
CACNA1H-211ENST00000639478 SPRR2BP35325 72 aa7.59□□□□□ -1.19
CACNA1H-211ENST00000639478 SPRR2AP35326 72 aa7.59□□□□□ -1.19
CACNA1H-211ENST00000639478 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
CACNA1H-211ENST00000639478 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
CACNA1H-211ENST00000639478 FAT1Q14517 4588 aa7.53□□□□□ -1.2
CACNA1H-211ENST00000639478 PKHD1P08F94 4074 aa7.51□□□□□ -1.21
CACNA1H-211ENST00000639478 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
CACNA1H-211ENST00000639478 MT1GP13640 62 aa7.48□□□□□ -1.21
CACNA1H-211ENST00000639478 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
CACNA1H-211ENST00000639478 PKD1P98161 4303 aa7.42□□□□□ -1.22
CACNA1H-211ENST00000639478 LCE3DQ9BYE3 92 aa7.36□□□□□ -1.23
CACNA1H-211ENST00000639478 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
CACNA1H-211ENST00000639478 SPRR2DP22532 72 aa7.33□□□□□ -1.24
CACNA1H-211ENST00000639478 LCE2BO14633 110 aa7.33□□□□□ -1.24
CACNA1H-211ENST00000639478 SACSQ9NZJ4 4579 aa7.28□□□□□ -1.24
CACNA1H-211ENST00000639478 MT1XP80297 61 aa7.27□□□□□ -1.25
CACNA1H-211ENST00000639478 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
CACNA1H-211ENST00000639478 LRP1Q07954 4544 aaKnown RBP7.23□□□□□ -1.25
CACNA1H-211ENST00000639478 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
CACNA1H-211ENST00000639478 LCE3EQ5T5B0 92 aa7.19□□□□□ -1.26
CACNA1H-211ENST00000639478 KRTAP19-8Q3LI54 63 aa7.17□□□□□ -1.26
CACNA1H-211ENST00000639478 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
CACNA1H-211ENST00000639478 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
CACNA1H-211ENST00000639478 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
CACNA1H-211ENST00000639478 DYNC1H1Q14204 4646 aaKnown RBP7.11□□□□□ -1.27
CACNA1H-211ENST00000639478 LPAP08519 4548 aa7.04□□□□□ -1.28
CACNA1H-211ENST00000639478 TNXBP22105 4242 aa7.02□□□□□ -1.29
CACNA1H-211ENST00000639478 MT1BP07438 61 aa6.94□□□□□ -1.3
CACNA1H-211ENST00000639478 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
CACNA1H-211ENST00000639478 PRM1P04553 51 aa6.87□□□□□ -1.31
CACNA1H-211ENST00000639478 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
CACNA1H-211ENST00000639478 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
CACNA1H-211ENST00000639478 HSPG2P98160 4391 aa6.84□□□□□ -1.31
CACNA1H-211ENST00000639478 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
CACNA1H-211ENST00000639478 MT1LQ93083 61 aa6.7□□□□□ -1.34
CACNA1H-211ENST00000639478 LCE1BQ5T7P3 118 aa6.68□□□□□ -1.34
CACNA1H-211ENST00000639478 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
CACNA1H-211ENST00000639478 MT4P47944 62 aa6.66□□□□□ -1.34
CACNA1H-211ENST00000639478 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
CACNA1H-211ENST00000639478 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
CACNA1H-211ENST00000639478 LRP2P98164 4655 aa6.62□□□□□ -1.35
CACNA1H-211ENST00000639478 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
CACNA1H-211ENST00000639478 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
CACNA1H-211ENST00000639478 MT3P25713 68 aa6.54□□□□□ -1.36
CACNA1H-211ENST00000639478 MT1EP04732 61 aa6.53□□□□□ -1.36
CACNA1H-211ENST00000639478 RYR1P21817 5038 aa6.46□□□□□ -1.38
CACNA1H-211ENST00000639478 DNHD1Q96M86 4753 aa6.4□□□□□ -1.39
CACNA1H-211ENST00000639478 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
CACNA1H-211ENST00000639478 MT1MQ8N339 61 aa6.35□□□□□ -1.39
CACNA1H-211ENST00000639478 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
CACNA1H-211ENST00000639478 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
CACNA1H-211ENST00000639478 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
CACNA1H-211ENST00000639478 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
CACNA1H-211ENST00000639478 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
CACNA1H-211ENST00000639478 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
CACNA1H-211ENST00000639478 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms