RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
CCDC7-214ENST00000639453 CUBNO60494 3623 aa0.81□□□□□ -2.28
CCDC7-214ENST00000639453 DNAH3Q8TD57 4116 aa0.8□□□□□ -2.28
CCDC7-214ENST00000639453 NBPF19A0A087WUL8 3843 aa0.8□□□□□ -2.28
CCDC7-214ENST00000639453 ZZEF1O43149 2961 aa0.8□□□□□ -2.28
CCDC7-214ENST00000639453 ANK3Q12955 4377 aaKnown RBP0.8□□□□□ -2.28
CCDC7-214ENST00000639453 CELSR3Q9NYQ7 3312 aa0.8□□□□□ -2.28
CCDC7-214ENST00000639453 ANKRD11Q6UB99 2663 aaPredicted RBP0.8□□□□□ -2.28
CCDC7-214ENST00000639453 NBEAL2Q6ZNJ1 2754 aa0.8□□□□□ -2.28
CCDC7-214ENST00000639453 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
CCDC7-214ENST00000639453 FLNBO75369 2602 aaKnown RBP0.8□□□□□ -2.28
CCDC7-214ENST00000639453 HUWE1Q7Z6Z7 4374 aaKnown RBP0.8□□□□□ -2.28
CCDC7-214ENST00000639453 TLN2Q9Y4G6 2542 aa0.79□□□□□ -2.28
CCDC7-214ENST00000639453 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
CCDC7-214ENST00000639453 DNAH2Q9P225 4427 aa0.78□□□□□ -2.28
CCDC7-214ENST00000639453 TACC2O95359 2948 aa0.78□□□□□ -2.28
CCDC7-214ENST00000639453 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-214ENST00000639453 SYNE2Q8WXH0 6885 aaKnown RBP0.78□□□□□ -2.29
CCDC7-214ENST00000639453 DNAH8Q96JB1 4490 aa0.77□□□□□ -2.29
CCDC7-214ENST00000639453 WDR87Q6ZQQ6 2873 aa0.77□□□□□ -2.29
CCDC7-214ENST00000639453 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
CCDC7-214ENST00000639453 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
CCDC7-214ENST00000639453 SPENQ96T58 3664 aaKnown RBP0.77□□□□□ -2.29
CCDC7-214ENST00000639453 AKAP9Q99996 3911 aa0.76□□□□□ -2.29
CCDC7-214ENST00000639453 CFAP54Q96N23 3096 aa0.76□□□□□ -2.29
CCDC7-214ENST00000639453 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
CCDC7-214ENST00000639453 FRYLO94915 3013 aa0.75□□□□□ -2.29
CCDC7-214ENST00000639453 PKHD1L1Q86WI1 4243 aa0.74□□□□□ -2.29
CCDC7-214ENST00000639453 SPRR2EP22531 72 aa0.74□□□□□ -2.29
CCDC7-214ENST00000639453 SPRR2FQ96RM1 72 aa0.74□□□□□ -2.29
CCDC7-214ENST00000639453 NBEAQ8NFP9 2946 aa0.74□□□□□ -2.29
CCDC7-214ENST00000639453 USP9XQ93008 2570 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-214ENST00000639453 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
CCDC7-214ENST00000639453 DNAH7Q8WXX0 4024 aa0.73□□□□□ -2.29
CCDC7-214ENST00000639453 NEBP20929 6669 aa0.73□□□□□ -2.29
CCDC7-214ENST00000639453 HSPG2P98160 4391 aa0.73□□□□□ -2.29
CCDC7-214ENST00000639453 FSIP2Q5CZC0 6907 aa0.73□□□□□ -2.29
CCDC7-214ENST00000639453 PKD1P98161 4303 aa0.73□□□□□ -2.29
CCDC7-214ENST00000639453 MYO18BQ8IUG5 2567 aa0.72□□□□□ -2.29
CCDC7-214ENST00000639453 MGAM2Q2M2H8 2515 aa0.72□□□□□ -2.29
CCDC7-214ENST00000639453 TRIOO75962 3097 aa0.72□□□□□ -2.29
CCDC7-214ENST00000639453 RELNP78509 3460 aa0.72□□□□□ -2.29
CCDC7-214ENST00000639453 ZANQ9Y493 2812 aa0.72□□□□□ -2.29
CCDC7-214ENST00000639453 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
CCDC7-214ENST00000639453 LAMA5O15230 3695 aa0.71□□□□□ -2.3
CCDC7-214ENST00000639453 FLNAP21333 2647 aaKnown RBP0.71□□□□□ -2.3
CCDC7-214ENST00000639453 ITPR1Q14643 2758 aa0.71□□□□□ -2.3
CCDC7-214ENST00000639453 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
CCDC7-214ENST00000639453 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
CCDC7-214ENST00000639453 HIVEP1P15822 2718 aa0.71□□□□□ -2.3
CCDC7-214ENST00000639453 CFAP46Q8IYW2 2715 aa0.71□□□□□ -2.3
CCDC7-214ENST00000639453 NIPBLQ6KC79 2804 aaeCLIP0.7□□□□□ -2.3
CCDC7-214ENST00000639453 DNAH10Q8IVF4 4471 aa0.7□□□□□ -2.3
CCDC7-214ENST00000639453 DOPEY1Q5JWR5 2465 aa0.7□□□□□ -2.3
CCDC7-214ENST00000639453 LPAP08519 4548 aa0.7□□□□□ -2.3
CCDC7-214ENST00000639453 TGP01266 2768 aa0.7□□□□□ -2.3
CCDC7-214ENST00000639453 DNAH6Q9C0G6 4158 aa0.7□□□□□ -2.3
CCDC7-214ENST00000639453 DNAH9Q9NYC9 4486 aa0.7□□□□□ -2.3
CCDC7-214ENST00000639453 FLGP20930 4061 aaPredicted RBP0.69□□□□□ -2.3
CCDC7-214ENST00000639453 SPTAN1Q13813 2472 aaKnown RBP0.69□□□□□ -2.3
CCDC7-214ENST00000639453 DEFB4AO15263 64 aa0.69□□□□□ -2.3
CCDC7-214ENST00000639453 SPTBN5Q9NRC6 3674 aaKnown RBP0.69□□□□□ -2.3
CCDC7-214ENST00000639453 PRUNE2Q8WUY3 3088 aa0.68□□□□□ -2.3
CCDC7-214ENST00000639453 CSMD1Q96PZ7 3565 aa0.68□□□□□ -2.3
CCDC7-214ENST00000639453 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
CCDC7-214ENST00000639453 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
CCDC7-214ENST00000639453 MAST4O15021 2626 aa0.68□□□□□ -2.3
CCDC7-214ENST00000639453 SVEP1Q4LDE5 3571 aa0.67□□□□□ -2.3
CCDC7-214ENST00000639453 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
CCDC7-214ENST00000639453 ATMQ13315 3056 aa0.67□□□□□ -2.3
CCDC7-214ENST00000639453 SZT2Q5T011 3432 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 C5orf42Q9H799 3197 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 NBEAL1Q6ZS30 2694 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 KALRNO60229 2985 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 KRTAP20-1Q3LI63 56 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 KMT2CQ8NEZ4 4911 aaKnown RBP0.66□□□□□ -2.3
CCDC7-214ENST00000639453 CMYA5Q8N3K9 4069 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 TEX15Q9BXT5 2789 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 LAMA3Q16787 3333 aa0.66□□□□□ -2.3
CCDC7-214ENST00000639453 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.3
CCDC7-214ENST00000639453 DNAH1Q9P2D7 4330 aa0.65□□□□□ -2.3
CCDC7-214ENST00000639453 LRBAP50851 2863 aa0.65□□□□□ -2.31
CCDC7-214ENST00000639453 KMT2DO14686 5537 aa0.64□□□□□ -2.31
CCDC7-214ENST00000639453 LAMA1P25391 3075 aa0.64□□□□□ -2.31
CCDC7-214ENST00000639453 MXRA5Q9NR99 2828 aa0.64□□□□□ -2.31
CCDC7-214ENST00000639453 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
CCDC7-214ENST00000639453 MAP1AP78559 2803 aaPredicted RBP0.64□□□□□ -2.31
CCDC7-214ENST00000639453 CENPEQ02224 2701 aa0.64□□□□□ -2.31
CCDC7-214ENST00000639453 RYR2Q92736 4967 aa0.64□□□□□ -2.31
CCDC7-214ENST00000639453 MT1EP04732 61 aa0.63□□□□□ -2.31
CCDC7-214ENST00000639453 ADGRG4Q8IZF6 3080 aa0.62□□□□□ -2.31
CCDC7-214ENST00000639453 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 IGSF10Q6WRI0 2623 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 RYR1P21817 5038 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 MT1HP80294 61 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 ITPR2Q14571 2701 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 PLECQ15149 4684 aaKnown RBP0.61□□□□□ -2.31
CCDC7-214ENST00000639453 HTTP42858 3142 aa0.61□□□□□ -2.31
CCDC7-214ENST00000639453 FAT1Q14517 4588 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms