RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 CPS1P31327 1500 aa-0.52□□□□□ -2.49
ATM-228ENST00000639240 PRXQ9BXM0 1461 aa-0.52□□□□□ -2.49
ATM-228ENST00000639240 MT4P47944 62 aa-0.52□□□□□ -2.49
ATM-228ENST00000639240 SMIM5Q71RC9 77 aa-0.52□□□□□ -2.49
ATM-228ENST00000639240 SPTBN5Q9NRC6 3674 aaKnown RBP-0.52□□□□□ -2.49
ATM-228ENST00000639240 LMO7Q8WWI1 1683 aa-0.53□□□□□ -2.49
ATM-228ENST00000639240 KIF21BO75037 1637 aa-0.53□□□□□ -2.49
ATM-228ENST00000639240 CELSR3Q9NYQ7 3312 aa-0.53□□□□□ -2.49
ATM-228ENST00000639240 MT1HP80294 61 aa-0.53□□□□□ -2.49
ATM-228ENST00000639240 KRTAP20-2Q3LI61 65 aa-0.53□□□□□ -2.49
ATM-228ENST00000639240 ABCA5Q8WWZ7 1642 aa-0.53□□□□□ -2.49
ATM-228ENST00000639240 ITPR1Q14643 2758 aa-0.54□□□□□ -2.5
ATM-228ENST00000639240 FAT1Q14517 4588 aa-0.54□□□□□ -2.5
ATM-228ENST00000639240 USP9XQ93008 2570 aaPredicted RBP-0.54□□□□□ -2.5
ATM-228ENST00000639240 M0QY20 66 aa-0.54□□□□□ -2.5
ATM-228ENST00000639240 LINC00308Q8TCZ7 52 aa-0.54□□□□□ -2.5
ATM-228ENST00000639240 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.55□□□□□ -2.5
ATM-228ENST00000639240 ADCY10Q96PN6 1610 aa-0.55□□□□□ -2.5
ATM-228ENST00000639240 A8MTW9 85 aa-0.55□□□□□ -2.5
ATM-228ENST00000639240 CLPSL2Q6UWE3 100 aa-0.55□□□□□ -2.5
ATM-228ENST00000639240 KRTAP8-1Q8IUC2 63 aa-0.55□□□□□ -2.5
ATM-228ENST00000639240 SYCP2Q9BX26 1530 aa-0.55□□□□□ -2.5
ATM-228ENST00000639240 LAMA3Q16787 3333 aa-0.55□□□□□ -2.5
ATM-228ENST00000639240 PREX2Q70Z35 1606 aa-0.56□□□□□ -2.5
ATM-228ENST00000639240 H0YGX0 51 aa-0.56□□□□□ -2.5
ATM-228ENST00000639240 M0QZ58 72 aa-0.56□□□□□ -2.5
ATM-228ENST00000639240 EFCAB6Q5THR3 1501 aa-0.56□□□□□ -2.5
ATM-228ENST00000639240 MROH2AA6NES4 1674 aa-0.56□□□□□ -2.5
ATM-228ENST00000639240 DNAH8Q96JB1 4490 aa-0.56□□□□□ -2.5
ATM-228ENST00000639240 AGLP35573 1532 aa-0.57□□□□□ -2.5
ATM-228ENST00000639240 TEX15Q9BXT5 2789 aa-0.57□□□□□ -2.5
ATM-228ENST00000639240 ABRACLQ9P1F3 81 aa-0.57□□□□□ -2.5
ATM-228ENST00000639240 C5orf42Q9H799 3197 aa-0.57□□□□□ -2.5
ATM-228ENST00000639240 NRXN3Q9Y4C0 1643 aa-0.57□□□□□ -2.5
ATM-228ENST00000639240 DEFB1P60022 68 aa-0.58□□□□□ -2.5
ATM-228ENST00000639240 DOPEY1Q5JWR5 2465 aa-0.59□□□□□ -2.5
ATM-228ENST00000639240 SMIM27A0A1W2PRY6 76 aa-0.6□□□□□ -2.51
ATM-228ENST00000639240 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
ATM-228ENST00000639240 KAAG1Q9UBP8 84 aa-0.6□□□□□ -2.51
ATM-228ENST00000639240 COL6A5A8TX70 2615 aa-0.61□□□□□ -2.51
ATM-228ENST00000639240 CMYA5Q8N3K9 4069 aa-0.62□□□□□ -2.51
ATM-228ENST00000639240 ABCC8Q09428 1581 aa-0.62□□□□□ -2.51
ATM-228ENST00000639240 PLNP26678 52 aa-0.63□□□□□ -2.51
ATM-228ENST00000639240 DNAH7Q8WXX0 4024 aa-0.63□□□□□ -2.51
ATM-228ENST00000639240 WFDC10BQ8IUB3 73 aa-0.64□□□□□ -2.51
ATM-228ENST00000639240 SRCAPQ6ZRS2 3230 aa-0.64□□□□□ -2.51
ATM-228ENST00000639240 IQGAP1P46940 1657 aa-0.65□□□□□ -2.51
ATM-228ENST00000639240 PLECQ15149 4684 aaKnown RBP-0.65□□□□□ -2.51
ATM-228ENST00000639240 CHD7Q9P2D1 2997 aa-0.65□□□□□ -2.51
ATM-228ENST00000639240 LAMA2P24043 3122 aaKnown RBP-0.66□□□□□ -2.51
ATM-228ENST00000639240 FANCD2Q9BXW9 1451 aa-0.66□□□□□ -2.51
ATM-228ENST00000639240 MGAQ8IWI9 3026 aa-0.66□□□□□ -2.51
ATM-228ENST00000639240 DDX60Q8IY21 1712 aaKnown RBP-0.67□□□□□ -2.52
ATM-228ENST00000639240 SPTAN1Q13813 2472 aaKnown RBP-0.67□□□□□ -2.52
ATM-228ENST00000639240 ADGRG4Q8IZF6 3080 aa-0.68□□□□□ -2.52
ATM-228ENST00000639240 CSMD1Q96PZ7 3565 aa-0.68□□□□□ -2.52
ATM-228ENST00000639240 DEFB131AP59861 70 aa-0.68□□□□□ -2.52
ATM-228ENST00000639240 NIPBLQ6KC79 2804 aaeCLIP-0.69□□□□□ -2.52
ATM-228ENST00000639240 MT1EP04732 61 aa-0.69□□□□□ -2.52
ATM-228ENST00000639240 KRTAP20-1Q3LI63 56 aa-0.69□□□□□ -2.52
ATM-228ENST00000639240 CMC2Q9NRP2 79 aa-0.69□□□□□ -2.52
ATM-228ENST00000639240 LRBAP50851 2863 aa-0.69□□□□□ -2.52
ATM-228ENST00000639240 DNHD1Q96M86 4753 aa-0.69□□□□□ -2.52
ATM-228ENST00000639240 DNAH17Q9UFH2 4485 aa-0.7□□□□□ -2.52
ATM-228ENST00000639240 LINC01546A6NGU7 62 aa-0.7□□□□□ -2.52
ATM-228ENST00000639240 MT1XP80297 61 aa-0.71□□□□□ -2.52
ATM-228ENST00000639240 DNAH10Q8IVF4 4471 aa-0.72□□□□□ -2.52
ATM-228ENST00000639240 CLTCL1P53675 1640 aa-0.72□□□□□ -2.52
ATM-228ENST00000639240 MYO9AB2RTY4 2548 aa-0.73□□□□□ -2.53
ATM-228ENST00000639240 BIRC6Q9NR09 4857 aa-0.73□□□□□ -2.53
ATM-228ENST00000639240 TRPM2O94759 1503 aa-0.74□□□□□ -2.53
ATM-228ENST00000639240 NFAT5O94916 1531 aa-0.74□□□□□ -2.53
ATM-228ENST00000639240 SPART-AS1P0CW21 52 aa-0.75□□□□□ -2.53
ATM-228ENST00000639240 MT1LQ93083 61 aa-0.75□□□□□ -2.53
ATM-228ENST00000639240 SMIM2Q9BVW6 85 aa-0.75□□□□□ -2.53
ATM-228ENST00000639240 DYNC1H1Q14204 4646 aaKnown RBP-0.75□□□□□ -2.53
ATM-228ENST00000639240 EYSQ5T1H1 3165 aa-0.75□□□□□ -2.53
ATM-228ENST00000639240 ZFHX4Q86UP3 3567 aa-0.76□□□□□ -2.53
ATM-228ENST00000639240 TFF3Q07654 80 aa-0.76□□□□□ -2.53
ATM-228ENST00000639240 CFAP46Q8IYW2 2715 aa-0.78□□□□□ -2.53
ATM-228ENST00000639240 POLR2KP53803 58 aaKnown RBP-0.8□□□□□ -2.54
ATM-228ENST00000639240 CSMD2Q7Z408 3487 aa-0.8□□□□□ -2.54
ATM-228ENST00000639240 TRRAPQ9Y4A5 3859 aa-0.81□□□□□ -2.54
ATM-228ENST00000639240 CRYBG3Q68DQ2 2970 aa-0.82□□□□□ -2.54
ATM-228ENST00000639240 CEP295Q9C0D2 2601 aa-0.83□□□□□ -2.54
ATM-228ENST00000639240 DMXL2Q8TDJ6 3036 aa-0.83□□□□□ -2.54
ATM-228ENST00000639240 SNRPGP15A8MWD9 76 aa-0.84□□□□□ -2.54
ATM-228ENST00000639240 NDUFA1O15239 70 aa-0.85□□□□□ -2.55
ATM-228ENST00000639240 MT1HL1P0DM35 61 aa-0.87□□□□□ -2.55
ATM-228ENST00000639240 LEAP2Q969E1 77 aa-0.87□□□□□ -2.55
ATM-228ENST00000639240 SMG1Q96Q15 3661 aaKnown RBP-0.87□□□□□ -2.55
ATM-228ENST00000639240 IQGAP2Q13576 1575 aa-0.87□□□□□ -2.55
ATM-228ENST00000639240 ITPR2Q14571 2701 aa-0.9□□□□□ -2.55
ATM-228ENST00000639240 TLN1Q9Y490 2541 aaKnown RBP-0.92□□□□□ -2.56
ATM-228ENST00000639240 DNAH5Q8TE73 4624 aa-0.92□□□□□ -2.56
ATM-228ENST00000639240 DEFB136Q30KP8 78 aa-0.93□□□□□ -2.56
ATM-228ENST00000639240 PRUNE2Q8WUY3 3088 aa-0.94□□□□□ -2.56
ATM-228ENST00000639240 MT1GP13640 62 aa-0.94□□□□□ -2.56
ATM-228ENST00000639240 MT1MQ8N339 61 aa-0.94□□□□□ -2.56
ATM-228ENST00000639240 MT2AP02795 61 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms