RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
CACNA1A-246ENST00000637736 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
CACNA1A-246ENST00000637736 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
CACNA1A-246ENST00000637736 ZNF469Q96JG9 3925 aaPredicted RBP7.95□□□□□ -1.14
CACNA1A-246ENST00000637736 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.16
CACNA1A-246ENST00000637736 DNAH1Q9P2D7 4330 aa7.83□□□□□ -1.16
CACNA1A-246ENST00000637736 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
CACNA1A-246ENST00000637736 LYSTQ99698 3801 aa7.78□□□□□ -1.16
CACNA1A-246ENST00000637736 DNAH7Q8WXX0 4024 aa7.77□□□□□ -1.17
CACNA1A-246ENST00000637736 CMYA5Q8N3K9 4069 aa7.76□□□□□ -1.17
CACNA1A-246ENST00000637736 DNAH3Q8TD57 4116 aa7.76□□□□□ -1.17
CACNA1A-246ENST00000637736 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
CACNA1A-246ENST00000637736 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
CACNA1A-246ENST00000637736 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
CACNA1A-246ENST00000637736 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
CACNA1A-246ENST00000637736 ANK2Q01484 3957 aa7.53□□□□□ -1.2
CACNA1A-246ENST00000637736 FRAS1Q86XX4 4008 aa7.52□□□□□ -1.21
CACNA1A-246ENST00000637736 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
CACNA1A-246ENST00000637736 HECTD4Q9Y4D8 3996 aa7.37□□□□□ -1.23
CACNA1A-246ENST00000637736 MT1HP80294 61 aa7.36□□□□□ -1.23
CACNA1A-246ENST00000637736 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
CACNA1A-246ENST00000637736 DNAH6Q9C0G6 4158 aa7.35□□□□□ -1.23
CACNA1A-246ENST00000637736 KRTAP19-5Q3LI72 72 aa7.3□□□□□ -1.24
CACNA1A-246ENST00000637736 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
CACNA1A-246ENST00000637736 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
CACNA1A-246ENST00000637736 DNAH9Q9NYC9 4486 aa7.22□□□□□ -1.25
CACNA1A-246ENST00000637736 FAT2Q9NYQ8 4349 aa7.19□□□□□ -1.26
CACNA1A-246ENST00000637736 MT2AP02795 61 aa7.17□□□□□ -1.26
CACNA1A-246ENST00000637736 SPRR2EP22531 72 aa7.14□□□□□ -1.27
CACNA1A-246ENST00000637736 SPRR2BP35325 72 aa7.14□□□□□ -1.27
CACNA1A-246ENST00000637736 SPRR2AP35326 72 aa7.14□□□□□ -1.27
CACNA1A-246ENST00000637736 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
CACNA1A-246ENST00000637736 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
CACNA1A-246ENST00000637736 PRKDCP78527 4128 aaKnown RBP7□□□□□ -1.29
CACNA1A-246ENST00000637736 MT1FP04733 61 aa6.98□□□□□ -1.29
CACNA1A-246ENST00000637736 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
CACNA1A-246ENST00000637736 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
CACNA1A-246ENST00000637736 SPRR2DP22532 72 aa6.91□□□□□ -1.3
CACNA1A-246ENST00000637736 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
CACNA1A-246ENST00000637736 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
CACNA1A-246ENST00000637736 KRTAP12-4P60329 112 aa6.89□□□□□ -1.31
CACNA1A-246ENST00000637736 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
CACNA1A-246ENST00000637736 LCE2BO14633 110 aa6.86□□□□□ -1.31
CACNA1A-246ENST00000637736 DNAH17Q9UFH2 4485 aa6.83□□□□□ -1.32
CACNA1A-246ENST00000637736 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
CACNA1A-246ENST00000637736 MT1GP13640 62 aa6.75□□□□□ -1.33
CACNA1A-246ENST00000637736 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
CACNA1A-246ENST00000637736 STARD9Q9P2P6 4700 aa6.68□□□□□ -1.34
CACNA1A-246ENST00000637736 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
CACNA1A-246ENST00000637736 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
CACNA1A-246ENST00000637736 LCE3DQ9BYE3 92 aa6.6□□□□□ -1.35
CACNA1A-246ENST00000637736 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
CACNA1A-246ENST00000637736 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
CACNA1A-246ENST00000637736 MT1XP80297 61 aa6.48□□□□□ -1.37
CACNA1A-246ENST00000637736 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
CACNA1A-246ENST00000637736 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
CACNA1A-246ENST00000637736 LCE3EQ5T5B0 92 aa6.43□□□□□ -1.38
CACNA1A-246ENST00000637736 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
CACNA1A-246ENST00000637736 LCE2DQ5TA82 110 aaPredicted RBP6.38□□□□□ -1.39
CACNA1A-246ENST00000637736 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
CACNA1A-246ENST00000637736 FAT1Q14517 4588 aa6.29□□□□□ -1.4
CACNA1A-246ENST00000637736 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
CACNA1A-246ENST00000637736 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
CACNA1A-246ENST00000637736 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
CACNA1A-246ENST00000637736 PKD1P98161 4303 aa6.24□□□□□ -1.41
CACNA1A-246ENST00000637736 MT4P47944 62 aa6.22□□□□□ -1.41
CACNA1A-246ENST00000637736 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
CACNA1A-246ENST00000637736 MT1BP07438 61 aa6.21□□□□□ -1.42
CACNA1A-246ENST00000637736 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
CACNA1A-246ENST00000637736 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
CACNA1A-246ENST00000637736 SACSQ9NZJ4 4579 aa6.15□□□□□ -1.43
CACNA1A-246ENST00000637736 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
CACNA1A-246ENST00000637736 MT1LQ93083 61 aa6.12□□□□□ -1.43
CACNA1A-246ENST00000637736 LCE1BQ5T7P3 118 aa6.12□□□□□ -1.43
CACNA1A-246ENST00000637736 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
CACNA1A-246ENST00000637736 PRM1P04553 51 aa6.07□□□□□ -1.44
CACNA1A-246ENST00000637736 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
CACNA1A-246ENST00000637736 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
CACNA1A-246ENST00000637736 TNXBP22105 4242 aa6.03□□□□□ -1.44
CACNA1A-246ENST00000637736 MT3P25713 68 aa5.98□□□□□ -1.45
CACNA1A-246ENST00000637736 HSPG2P98160 4391 aa5.93□□□□□ -1.46
CACNA1A-246ENST00000637736 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
CACNA1A-246ENST00000637736 MT1EP04732 61 aa5.91□□□□□ -1.46
CACNA1A-246ENST00000637736 MYCBP2O75592 4640 aa5.82□□□□□ -1.48
CACNA1A-246ENST00000637736 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
CACNA1A-246ENST00000637736 MT1MQ8N339 61 aa5.76□□□□□ -1.49
CACNA1A-246ENST00000637736 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
CACNA1A-246ENST00000637736 LPAP08519 4548 aa5.71□□□□□ -1.5
CACNA1A-246ENST00000637736 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
CACNA1A-246ENST00000637736 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
CACNA1A-246ENST00000637736 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
CACNA1A-246ENST00000637736 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
CACNA1A-246ENST00000637736 RYR1P21817 5038 aa5.6□□□□□ -1.51
CACNA1A-246ENST00000637736 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
CACNA1A-246ENST00000637736 LCE1CQ5T751 118 aa5.5□□□□□ -1.53
CACNA1A-246ENST00000637736 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
CACNA1A-246ENST00000637736 LCE1FQ5T754 118 aa5.5□□□□□ -1.53
CACNA1A-246ENST00000637736 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
CACNA1A-246ENST00000637736 RYR3Q15413 4870 aa5.47□□□□□ -1.53
CACNA1A-246ENST00000637736 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms