RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 CENPEQ02224 2701 aa1.57□□□□□ -2.16
CHD2-228ENST00000637613 NBPF19A0A087WUL8 3843 aa1.57□□□□□ -2.16
CHD2-228ENST00000637613 CUBNO60494 3623 aa1.57□□□□□ -2.16
CHD2-228ENST00000637613 UNC79Q9P2D8 2635 aa1.56□□□□□ -2.16
CHD2-228ENST00000637613 NBEAL2Q6ZNJ1 2754 aa1.56□□□□□ -2.16
CHD2-228ENST00000637613 ATRQ13535 2644 aa1.55□□□□□ -2.16
CHD2-228ENST00000637613 PDZD2O15018 2839 aa1.55□□□□□ -2.16
CHD2-228ENST00000637613 NF1P21359 2839 aa1.55□□□□□ -2.16
CHD2-228ENST00000637613 HIVEP1P15822 2718 aa1.55□□□□□ -2.16
CHD2-228ENST00000637613 NIPBLQ6KC79 2804 aaeCLIP1.54□□□□□ -2.163e-9■□□□□ 9.6
CHD2-228ENST00000637613 F8P00451 2351 aa1.54□□□□□ -2.16
CHD2-228ENST00000637613 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
CHD2-228ENST00000637613 ANK2Q01484 3957 aa1.53□□□□□ -2.16
CHD2-228ENST00000637613 CSAG1Q6PB30 78 aa1.53□□□□□ -2.16
CHD2-228ENST00000637613 MAST4O15021 2626 aa1.53□□□□□ -2.17
CHD2-228ENST00000637613 DNAH1Q9P2D7 4330 aa1.52□□□□□ -2.17
CHD2-228ENST00000637613 H1FX-AS1Q4G0G2 97 aa1.52□□□□□ -2.17
CHD2-228ENST00000637613 VWFP04275 2813 aa1.51□□□□□ -2.17
CHD2-228ENST00000637613 DNAH3Q8TD57 4116 aa1.51□□□□□ -2.17
CHD2-228ENST00000637613 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
CHD2-228ENST00000637613 COX6B2Q6YFQ2 88 aa1.51□□□□□ -2.17
CHD2-228ENST00000637613 Q6ZSA8 131 aa1.51□□□□□ -2.17
CHD2-228ENST00000637613 TENM2Q9NT68 2774 aa1.51□□□□□ -2.17
CHD2-228ENST00000637613 TENM4Q6N022 2769 aa1.5□□□□□ -2.17
CHD2-228ENST00000637613 HUWE1Q7Z6Z7 4374 aaKnown RBP1.5□□□□□ -2.17
CHD2-228ENST00000637613 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
CHD2-228ENST00000637613 ALMS1Q8TCU4 4167 aa1.49□□□□□ -2.17
CHD2-228ENST00000637613 CMYA5Q8N3K9 4069 aa1.49□□□□□ -2.17
CHD2-228ENST00000637613 C9orf92A6NGG3 77 aa1.49□□□□□ -2.17
CHD2-228ENST00000637613 RPL37P61927 97 aaKnown RBP1.49□□□□□ -2.17
CHD2-228ENST00000637613 S4R3F8 94 aa1.49□□□□□ -2.17
CHD2-228ENST00000637613 HECTD1Q9ULT8 2610 aa1.49□□□□□ -2.17
CHD2-228ENST00000637613 OTOGQ6ZRI0 2925 aa1.48□□□□□ -2.17
CHD2-228ENST00000637613 TRRAPQ9Y4A5 3859 aa1.48□□□□□ -2.17
CHD2-228ENST00000637613 NBEAL1Q6ZS30 2694 aa1.48□□□□□ -2.17
CHD2-228ENST00000637613 TENM3Q9P273 2699 aa1.48□□□□□ -2.17
CHD2-228ENST00000637613 FLNBO75369 2602 aaKnown RBP1.48□□□□□ -2.17
CHD2-228ENST00000637613 H0YAA0 97 aa1.47□□□□□ -2.17
CHD2-228ENST00000637613 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
CHD2-228ENST00000637613 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.17
CHD2-228ENST00000637613 DNAH6Q9C0G6 4158 aa1.46□□□□□ -2.18
CHD2-228ENST00000637613 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
CHD2-228ENST00000637613 PKD1L1Q8TDX9 2849 aa1.46□□□□□ -2.18
CHD2-228ENST00000637613 FRAS1Q86XX4 4008 aa1.45□□□□□ -2.18
CHD2-228ENST00000637613 DYNC2H1Q8NCM8 4307 aaKnown RBP1.45□□□□□ -2.18
CHD2-228ENST00000637613 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
CHD2-228ENST00000637613 DNAH9Q9NYC9 4486 aa1.45□□□□□ -2.18
CHD2-228ENST00000637613 STAB1Q9NY15 2570 aa1.45□□□□□ -2.18
CHD2-228ENST00000637613 DNAH10Q8IVF4 4471 aa1.44□□□□□ -2.18
CHD2-228ENST00000637613 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
CHD2-228ENST00000637613 VPS13DQ5THJ4 4388 aa1.44□□□□□ -2.18
CHD2-228ENST00000637613 NOTCH1P46531 2555 aa1.43□□□□□ -2.18
CHD2-228ENST00000637613 A0A0D9SG42 100 aa1.43□□□□□ -2.18
CHD2-228ENST00000637613 M0QZ58 72 aa1.43□□□□□ -2.18
CHD2-228ENST00000637613 DNAH7Q8WXX0 4024 aa1.43□□□□□ -2.18
CHD2-228ENST00000637613 LYSTQ99698 3801 aa1.43□□□□□ -2.18
CHD2-228ENST00000637613 MGAM2Q2M2H8 2515 aa1.42□□□□□ -2.18
CHD2-228ENST00000637613 SMR3BP02814 79 aaPredicted RBP1.42□□□□□ -2.18
CHD2-228ENST00000637613 COL6A5A8TX70 2615 aa1.42□□□□□ -2.18
CHD2-228ENST00000637613 STAB2Q8WWQ8 2551 aa1.41□□□□□ -2.18
CHD2-228ENST00000637613 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
CHD2-228ENST00000637613 DNAH17Q9UFH2 4485 aa1.41□□□□□ -2.18
CHD2-228ENST00000637613 STARD9Q9P2P6 4700 aa1.4□□□□□ -2.18
CHD2-228ENST00000637613 HECTD4Q9Y4D8 3996 aa1.4□□□□□ -2.19
CHD2-228ENST00000637613 TGP01266 2768 aa1.4□□□□□ -2.19
CHD2-228ENST00000637613 INE1O15225 51 aa1.4□□□□□ -2.19
CHD2-228ENST00000637613 KRTAP21-3Q3LHN1 58 aa1.4□□□□□ -2.19
CHD2-228ENST00000637613 FBN1P35555 2871 aaKnown RBP1.4□□□□□ -2.19
CHD2-228ENST00000637613 PLECQ15149 4684 aaKnown RBP1.39□□□□□ -2.19
CHD2-228ENST00000637613 DNAH8Q96JB1 4490 aa1.39□□□□□ -2.19
CHD2-228ENST00000637613 Q5VSD8 79 aa1.39□□□□□ -2.19
CHD2-228ENST00000637613 DNAH11Q96DT5 4516 aa1.38□□□□□ -2.19
CHD2-228ENST00000637613 COL7A1Q02388 2944 aa1.38□□□□□ -2.19
CHD2-228ENST00000637613 SRRM2Q9UQ35 2752 aaKnown RBP1.37□□□□□ -2.19
CHD2-228ENST00000637613 CSMD3Q7Z407 3707 aa1.37□□□□□ -2.19
CHD2-228ENST00000637613 DNAH2Q9P225 4427 aa1.37□□□□□ -2.19
CHD2-228ENST00000637613 MEGF8Q7Z7M0 2845 aa1.36□□□□□ -2.19
CHD2-228ENST00000637613 KMT2AQ03164 3969 aa1.36□□□□□ -2.19
CHD2-228ENST00000637613 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
CHD2-228ENST00000637613 DNAH5Q8TE73 4624 aa1.34□□□□□ -2.19
CHD2-228ENST00000637613 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.2
CHD2-228ENST00000637613 C10orf95Q9H7T3 257 aa1.33□□□□□ -2.2
CHD2-228ENST00000637613 PKHD1L1Q86WI1 4243 aa1.32□□□□□ -2.2
CHD2-228ENST00000637613 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
CHD2-228ENST00000637613 PLAC4Q8WY50 150 aa1.32□□□□□ -2.2
CHD2-228ENST00000637613 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
CHD2-228ENST00000637613 FBN3Q75N90 2809 aa1.31□□□□□ -2.2
CHD2-228ENST00000637613 KRTAP10-4P60372 401 aaPredicted RBP1.31□□□□□ -2.2
CHD2-228ENST00000637613 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
CHD2-228ENST00000637613 HYDINQ4G0P3 5121 aa1.3□□□□□ -2.2
CHD2-228ENST00000637613 TNP1P09430 55 aa1.3□□□□□ -2.2
CHD2-228ENST00000637613 SACSQ9NZJ4 4579 aa1.3□□□□□ -2.2
CHD2-228ENST00000637613 FAT2Q9NYQ8 4349 aa1.29□□□□□ -2.2
CHD2-228ENST00000637613 PKD1P98161 4303 aa1.29□□□□□ -2.2
CHD2-228ENST00000637613 TNXBP22105 4242 aa1.28□□□□□ -2.2
CHD2-228ENST00000637613 APOBP04114 4563 aaKnown RBP1.28□□□□□ -2.2
CHD2-228ENST00000637613 LRP1BQ9NZR2 4599 aa1.26□□□□□ -2.21
CHD2-228ENST00000637613 MT1HL1P0DM35 61 aa1.23□□□□□ -2.21
CHD2-228ENST00000637613 DYNC1H1Q14204 4646 aaKnown RBP1.23□□□□□ -2.21
CHD2-228ENST00000637613 HSPG2P98160 4391 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms