RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
SMARCA2-258ENST00000637103 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
SMARCA2-258ENST00000637103 CUBNO60494 3623 aa4.32□□□□□ -1.72
SMARCA2-258ENST00000637103 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
SMARCA2-258ENST00000637103 SVEP1Q4LDE5 3571 aa4.3□□□□□ -1.72
SMARCA2-258ENST00000637103 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
SMARCA2-258ENST00000637103 MUC3AQ02505 3323 aa4.27□□□□□ -1.73
SMARCA2-258ENST00000637103 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
SMARCA2-258ENST00000637103 DNAH17Q9UFH2 4485 aa4.26□□□□□ -1.73
SMARCA2-258ENST00000637103 MT2AP02795 61 aa4.25□□□□□ -1.73
SMARCA2-258ENST00000637103 DNAH5Q8TE73 4624 aa4.25□□□□□ -1.73
SMARCA2-258ENST00000637103 MT1HP80294 61 aa4.25□□□□□ -1.73
SMARCA2-258ENST00000637103 DNAH9Q9NYC9 4486 aa4.24□□□□□ -1.73
SMARCA2-258ENST00000637103 SPENQ96T58 3664 aaKnown RBP4.23□□□□□ -1.73
SMARCA2-258ENST00000637103 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
SMARCA2-258ENST00000637103 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
SMARCA2-258ENST00000637103 BSNQ9UPA5 3926 aa4.15□□□□□ -1.74
SMARCA2-258ENST00000637103 VPS13CQ709C8 3753 aa4.15□□□□□ -1.74
SMARCA2-258ENST00000637103 MT1FP04733 61 aa4.15□□□□□ -1.75
SMARCA2-258ENST00000637103 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
SMARCA2-258ENST00000637103 VPS13DQ5THJ4 4388 aa4.14□□□□□ -1.75
SMARCA2-258ENST00000637103 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
SMARCA2-258ENST00000637103 CSMD2Q7Z408 3487 aa4.11□□□□□ -1.75
SMARCA2-258ENST00000637103 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
SMARCA2-258ENST00000637103 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-258ENST00000637103 PLECQ15149 4684 aaKnown RBP4.11□□□□□ -1.75
SMARCA2-258ENST00000637103 FAT1Q14517 4588 aa4.07□□□□□ -1.76
SMARCA2-258ENST00000637103 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
SMARCA2-258ENST00000637103 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
SMARCA2-258ENST00000637103 DYNC2H1Q8NCM8 4307 aaKnown RBP4.03□□□□□ -1.76
SMARCA2-258ENST00000637103 CMYA5Q8N3K9 4069 aa4.02□□□□□ -1.77
SMARCA2-258ENST00000637103 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
SMARCA2-258ENST00000637103 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
SMARCA2-258ENST00000637103 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SMARCA2-258ENST00000637103 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
SMARCA2-258ENST00000637103 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
SMARCA2-258ENST00000637103 FAT2Q9NYQ8 4349 aa3.95□□□□□ -1.78
SMARCA2-258ENST00000637103 MT1XP80297 61 aa3.94□□□□□ -1.78
SMARCA2-258ENST00000637103 DNAH6Q9C0G6 4158 aa3.93□□□□□ -1.78
SMARCA2-258ENST00000637103 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
SMARCA2-258ENST00000637103 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
SMARCA2-258ENST00000637103 ANK2Q01484 3957 aa3.88□□□□□ -1.79
SMARCA2-258ENST00000637103 LRP1Q07954 4544 aaKnown RBP3.86□□□□□ -1.79
SMARCA2-258ENST00000637103 STARD9Q9P2P6 4700 aa3.84□□□□□ -1.79
SMARCA2-258ENST00000637103 MT1GP13640 62 aa3.84□□□□□ -1.8
SMARCA2-258ENST00000637103 MT1BP07438 61 aa3.83□□□□□ -1.8
SMARCA2-258ENST00000637103 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
SMARCA2-258ENST00000637103 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
SMARCA2-258ENST00000637103 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
SMARCA2-258ENST00000637103 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
SMARCA2-258ENST00000637103 PRKDCP78527 4128 aaKnown RBP3.78□□□□□ -1.8
SMARCA2-258ENST00000637103 HSPG2P98160 4391 aa3.77□□□□□ -1.81
SMARCA2-258ENST00000637103 HERC1Q15751 4861 aa3.76□□□□□ -1.81
SMARCA2-258ENST00000637103 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
SMARCA2-258ENST00000637103 ZNF469Q96JG9 3925 aaPredicted RBP3.73□□□□□ -1.81
SMARCA2-258ENST00000637103 RYR1P21817 5038 aa3.72□□□□□ -1.81
SMARCA2-258ENST00000637103 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
SMARCA2-258ENST00000637103 SPRR2EP22531 72 aa3.69□□□□□ -1.82
SMARCA2-258ENST00000637103 SPRR2BP35325 72 aa3.69□□□□□ -1.82
SMARCA2-258ENST00000637103 SPRR2AP35326 72 aa3.69□□□□□ -1.82
SMARCA2-258ENST00000637103 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
SMARCA2-258ENST00000637103 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
SMARCA2-258ENST00000637103 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
SMARCA2-258ENST00000637103 FRAS1Q86XX4 4008 aa3.66□□□□□ -1.82
SMARCA2-258ENST00000637103 MT1LQ93083 61 aa3.65□□□□□ -1.83
SMARCA2-258ENST00000637103 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
SMARCA2-258ENST00000637103 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
SMARCA2-258ENST00000637103 RYR3Q15413 4870 aa3.62□□□□□ -1.83
SMARCA2-258ENST00000637103 LCE2BO14633 110 aa3.61□□□□□ -1.83
SMARCA2-258ENST00000637103 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
SMARCA2-258ENST00000637103 LCE2CQ5TA81 110 aa3.59□□□□□ -1.84
SMARCA2-258ENST00000637103 SPRR2DP22532 72 aa3.58□□□□□ -1.84
SMARCA2-258ENST00000637103 RYR2Q92736 4967 aa3.58□□□□□ -1.84
SMARCA2-258ENST00000637103 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
SMARCA2-258ENST00000637103 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
SMARCA2-258ENST00000637103 PRM1P04553 51 aa3.56□□□□□ -1.84
SMARCA2-258ENST00000637103 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
SMARCA2-258ENST00000637103 MT1EP04732 61 aa3.55□□□□□ -1.84
SMARCA2-258ENST00000637103 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
SMARCA2-258ENST00000637103 PKD1P98161 4303 aa3.52□□□□□ -1.85
SMARCA2-258ENST00000637103 LYSTQ99698 3801 aa3.49□□□□□ -1.85
SMARCA2-258ENST00000637103 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
SMARCA2-258ENST00000637103 MT3P25713 68 aa3.43□□□□□ -1.86
SMARCA2-258ENST00000637103 MT1MQ8N339 61 aa3.43□□□□□ -1.86
SMARCA2-258ENST00000637103 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
SMARCA2-258ENST00000637103 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
SMARCA2-258ENST00000637103 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
SMARCA2-258ENST00000637103 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
SMARCA2-258ENST00000637103 HERC2O95714 4834 aa3.37□□□□□ -1.87
SMARCA2-258ENST00000637103 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
SMARCA2-258ENST00000637103 LRP2P98164 4655 aa3.32□□□□□ -1.88
SMARCA2-258ENST00000637103 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SMARCA2-258ENST00000637103 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
SMARCA2-258ENST00000637103 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
SMARCA2-258ENST00000637103 PKHD1P08F94 4074 aa3.28□□□□□ -1.88
SMARCA2-258ENST00000637103 TNXBP22105 4242 aa3.27□□□□□ -1.89
SMARCA2-258ENST00000637103 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
SMARCA2-258ENST00000637103 MT1AP04731 61 aa3.26□□□□□ -1.89
SMARCA2-258ENST00000637103 LCE2DQ5TA82 110 aaPredicted RBP3.26□□□□□ -1.89
SMARCA2-258ENST00000637103 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms