RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 CMYA5Q8N3K9 4069 aa3.69□□□□□ -1.82
CACNB4-239ENST00000636947 HUWE1Q7Z6Z7 4374 aaKnown RBP3.64□□□□□ -1.83
CACNB4-239ENST00000636947 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
CACNB4-239ENST00000636947 DNAH3Q8TD57 4116 aa3.61□□□□□ -1.83
CACNB4-239ENST00000636947 DNAH7Q8WXX0 4024 aa3.59□□□□□ -1.83
CACNB4-239ENST00000636947 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
CACNB4-239ENST00000636947 DNHD1Q96M86 4753 aa3.58□□□□□ -1.84
CACNB4-239ENST00000636947 KRTAP10-4P60372 401 aaPredicted RBP3.57□□□□□ -1.84
CACNB4-239ENST00000636947 DNAH9Q9NYC9 4486 aa3.57□□□□□ -1.84
CACNB4-239ENST00000636947 INE1O15225 51 aa3.57□□□□□ -1.84
CACNB4-239ENST00000636947 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
CACNB4-239ENST00000636947 DNAH10Q8IVF4 4471 aa3.54□□□□□ -1.84
CACNB4-239ENST00000636947 MEGF8Q7Z7M0 2845 aa3.54□□□□□ -1.84
CACNB4-239ENST00000636947 ALMS1Q8TCU4 4167 aa3.51□□□□□ -1.85
CACNB4-239ENST00000636947 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
CACNB4-239ENST00000636947 PRKDCP78527 4128 aaKnown RBP3.49□□□□□ -1.85
CACNB4-239ENST00000636947 DNAH6Q9C0G6 4158 aa3.48□□□□□ -1.85
CACNB4-239ENST00000636947 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
CACNB4-239ENST00000636947 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
CACNB4-239ENST00000636947 PLECQ15149 4684 aaKnown RBP3.46□□□□□ -1.86
CACNB4-239ENST00000636947 MT1HP80294 61 aa3.46□□□□□ -1.86
CACNB4-239ENST00000636947 KMT2AQ03164 3969 aa3.46□□□□□ -1.86
CACNB4-239ENST00000636947 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
CACNB4-239ENST00000636947 DYNC2H1Q8NCM8 4307 aaKnown RBP3.42□□□□□ -1.86
CACNB4-239ENST00000636947 STARD9Q9P2P6 4700 aa3.42□□□□□ -1.86
CACNB4-239ENST00000636947 HECTD4Q9Y4D8 3996 aa3.41□□□□□ -1.86
CACNB4-239ENST00000636947 SPRR2EP22531 72 aa3.41□□□□□ -1.86
CACNB4-239ENST00000636947 SPRR2BP35325 72 aa3.41□□□□□ -1.86
CACNB4-239ENST00000636947 SPRR2AP35326 72 aa3.41□□□□□ -1.86
CACNB4-239ENST00000636947 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
CACNB4-239ENST00000636947 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
CACNB4-239ENST00000636947 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
CACNB4-239ENST00000636947 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
CACNB4-239ENST00000636947 FAT2Q9NYQ8 4349 aa3.34□□□□□ -1.88
CACNB4-239ENST00000636947 MT2AP02795 61 aa3.33□□□□□ -1.88
CACNB4-239ENST00000636947 SPRR2DP22532 72 aa3.33□□□□□ -1.88
CACNB4-239ENST00000636947 DNAH2Q9P225 4427 aa3.32□□□□□ -1.88
CACNB4-239ENST00000636947 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
CACNB4-239ENST00000636947 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
CACNB4-239ENST00000636947 DNAH11Q96DT5 4516 aa3.28□□□□□ -1.88
CACNB4-239ENST00000636947 LCE2BO14633 110 aa3.28□□□□□ -1.88
CACNB4-239ENST00000636947 HYDINQ4G0P3 5121 aa3.26□□□□□ -1.89
CACNB4-239ENST00000636947 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
CACNB4-239ENST00000636947 SACSQ9NZJ4 4579 aa3.24□□□□□ -1.89
CACNB4-239ENST00000636947 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
CACNB4-239ENST00000636947 PKD1P98161 4303 aa3.22□□□□□ -1.89
CACNB4-239ENST00000636947 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
CACNB4-239ENST00000636947 DYNC1H1Q14204 4646 aaKnown RBP3.22□□□□□ -1.89
CACNB4-239ENST00000636947 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
CACNB4-239ENST00000636947 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.89
CACNB4-239ENST00000636947 MT1FP04733 61 aa3.2□□□□□ -1.9
CACNB4-239ENST00000636947 FAT1Q14517 4588 aa3.19□□□□□ -1.9
CACNB4-239ENST00000636947 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
CACNB4-239ENST00000636947 KRTAP9-6A0A140TA67 174 aa3.19□□□□□ -1.9
CACNB4-239ENST00000636947 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
CACNB4-239ENST00000636947 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
CACNB4-239ENST00000636947 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
CACNB4-239ENST00000636947 RYR2Q92736 4967 aa3.17□□□□□ -1.9
CACNB4-239ENST00000636947 KRTAP9-2Q9BYQ4 174 aa3.16□□□□□ -1.9
CACNB4-239ENST00000636947 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.9
CACNB4-239ENST00000636947 RYR3Q15413 4870 aa3.11□□□□□ -1.91
CACNB4-239ENST00000636947 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
CACNB4-239ENST00000636947 APOBP04114 4563 aaKnown RBP3.08□□□□□ -1.92
CACNB4-239ENST00000636947 RYR1P21817 5038 aa3.08□□□□□ -1.92
CACNB4-239ENST00000636947 KIAA1109Q2LD37 5005 aa3.07□□□□□ -1.92
CACNB4-239ENST00000636947 PKHD1L1Q86WI1 4243 aa3.07□□□□□ -1.92
CACNB4-239ENST00000636947 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
CACNB4-239ENST00000636947 HERC1Q15751 4861 aa3.06□□□□□ -1.92
CACNB4-239ENST00000636947 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
CACNB4-239ENST00000636947 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
CACNB4-239ENST00000636947 HSPG2P98160 4391 aa3.04□□□□□ -1.92
CACNB4-239ENST00000636947 TNXBP22105 4242 aa3.02□□□□□ -1.93
CACNB4-239ENST00000636947 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
CACNB4-239ENST00000636947 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
CACNB4-239ENST00000636947 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
CACNB4-239ENST00000636947 BIRC6Q9NR09 4857 aa3.01□□□□□ -1.93
CACNB4-239ENST00000636947 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
CACNB4-239ENST00000636947 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.93
CACNB4-239ENST00000636947 MT1GP13640 62 aa2.95□□□□□ -1.94
CACNB4-239ENST00000636947 HERC2O95714 4834 aa2.95□□□□□ -1.94
CACNB4-239ENST00000636947 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
CACNB4-239ENST00000636947 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CACNB4-239ENST00000636947 LPAP08519 4548 aa2.92□□□□□ -1.94
CACNB4-239ENST00000636947 LCE3BQ5TA77 95 aa2.91□□□□□ -1.94
CACNB4-239ENST00000636947 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
CACNB4-239ENST00000636947 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
CACNB4-239ENST00000636947 MT4P47944 62 aa2.87□□□□□ -1.95
CACNB4-239ENST00000636947 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
CACNB4-239ENST00000636947 KRTAP9-3Q9BYQ3 159 aa2.85□□□□□ -1.95
CACNB4-239ENST00000636947 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
CACNB4-239ENST00000636947 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
CACNB4-239ENST00000636947 MT1BP07438 61 aa2.8□□□□□ -1.96
CACNB4-239ENST00000636947 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
CACNB4-239ENST00000636947 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
CACNB4-239ENST00000636947 LRP2P98164 4655 aa2.79□□□□□ -1.96
CACNB4-239ENST00000636947 MT1XP80297 61 aa2.79□□□□□ -1.96
CACNB4-239ENST00000636947 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
CACNB4-239ENST00000636947 LOC100996750A0A140TA64 210 aa2.76□□□□□ -1.97
CACNB4-239ENST00000636947 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
CACNB4-239ENST00000636947 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms