RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
SCN2A-212ENST00000636662 BSNQ9UPA5 3926 aa2.21□□□□□ -2.06
SCN2A-212ENST00000636662 HUWE1Q7Z6Z7 4374 aaKnown RBP2.2□□□□□ -2.06
SCN2A-212ENST00000636662 LYSTQ99698 3801 aa2.19□□□□□ -2.06
SCN2A-212ENST00000636662 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
SCN2A-212ENST00000636662 DNAH2Q9P225 4427 aa2.18□□□□□ -2.06
SCN2A-212ENST00000636662 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
SCN2A-212ENST00000636662 LORP23490 312 aaPredicted RBP2.17□□□□□ -2.06
SCN2A-212ENST00000636662 HECTD4Q9Y4D8 3996 aa2.15□□□□□ -2.06
SCN2A-212ENST00000636662 CUBNO60494 3623 aa2.15□□□□□ -2.07
SCN2A-212ENST00000636662 ANK2Q01484 3957 aa2.15□□□□□ -2.07
SCN2A-212ENST00000636662 MT1HL1P0DM35 61 aa2.15□□□□□ -2.07
SCN2A-212ENST00000636662 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
SCN2A-212ENST00000636662 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
SCN2A-212ENST00000636662 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
SCN2A-212ENST00000636662 ANK3Q12955 4377 aaKnown RBP2.13□□□□□ -2.07
SCN2A-212ENST00000636662 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
SCN2A-212ENST00000636662 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
SCN2A-212ENST00000636662 MT3P25713 68 aa2.12□□□□□ -2.07
SCN2A-212ENST00000636662 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
SCN2A-212ENST00000636662 CSMD3Q7Z407 3707 aa2.1□□□□□ -2.07
SCN2A-212ENST00000636662 MUC3AQ02505 3323 aa2.09□□□□□ -2.07
SCN2A-212ENST00000636662 DNAH8Q96JB1 4490 aa2.09□□□□□ -2.08
SCN2A-212ENST00000636662 CSMD2Q7Z408 3487 aa2.08□□□□□ -2.08
SCN2A-212ENST00000636662 ZNF469Q96JG9 3925 aaPredicted RBP2.08□□□□□ -2.08
SCN2A-212ENST00000636662 DNAH11Q96DT5 4516 aa2.08□□□□□ -2.08
SCN2A-212ENST00000636662 PRKDCP78527 4128 aaKnown RBP2.06□□□□□ -2.08
SCN2A-212ENST00000636662 DYNC2H1Q8NCM8 4307 aaKnown RBP2.05□□□□□ -2.08
SCN2A-212ENST00000636662 KRTAP19-5Q3LI72 72 aa2.05□□□□□ -2.08
SCN2A-212ENST00000636662 LCE2DQ5TA82 110 aaPredicted RBP2.05□□□□□ -2.08
SCN2A-212ENST00000636662 VPS13BQ7Z7G8 4022 aa2.04□□□□□ -2.08
SCN2A-212ENST00000636662 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
SCN2A-212ENST00000636662 VPS13DQ5THJ4 4388 aa2.03□□□□□ -2.08
SCN2A-212ENST00000636662 KRTAP4-5Q9BYR2 181 aa2.02□□□□□ -2.09
SCN2A-212ENST00000636662 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
SCN2A-212ENST00000636662 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
SCN2A-212ENST00000636662 KMT2AQ03164 3969 aa1.98□□□□□ -2.09
SCN2A-212ENST00000636662 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
SCN2A-212ENST00000636662 KRTAP19-8Q3LI54 63 aa1.98□□□□□ -2.09
SCN2A-212ENST00000636662 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
SCN2A-212ENST00000636662 FLGP20930 4061 aaPredicted RBP1.96□□□□□ -2.1
SCN2A-212ENST00000636662 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
SCN2A-212ENST00000636662 HSPG2P98160 4391 aa1.94□□□□□ -2.1
SCN2A-212ENST00000636662 PRM1P04553 51 aa1.94□□□□□ -2.1
SCN2A-212ENST00000636662 DNAH5Q8TE73 4624 aa1.93□□□□□ -2.1
SCN2A-212ENST00000636662 PKD1P98161 4303 aa1.92□□□□□ -2.1
SCN2A-212ENST00000636662 MT1GP13640 62 aa1.92□□□□□ -2.1
SCN2A-212ENST00000636662 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
SCN2A-212ENST00000636662 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
SCN2A-212ENST00000636662 SPRR2EP22531 72 aa1.88□□□□□ -2.11
SCN2A-212ENST00000636662 SPRR2BP35325 72 aa1.88□□□□□ -2.11
SCN2A-212ENST00000636662 SPRR2AP35326 72 aa1.88□□□□□ -2.11
SCN2A-212ENST00000636662 KRTAP19-1Q8IUB9 90 aa1.87□□□□□ -2.11
SCN2A-212ENST00000636662 MT2AP02795 61 aa1.87□□□□□ -2.11
SCN2A-212ENST00000636662 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
SCN2A-212ENST00000636662 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
SCN2A-212ENST00000636662 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
SCN2A-212ENST00000636662 SACSQ9NZJ4 4579 aa1.86□□□□□ -2.11
SCN2A-212ENST00000636662 PKHD1L1Q86WI1 4243 aa1.85□□□□□ -2.11
SCN2A-212ENST00000636662 DYNC1H1Q14204 4646 aaKnown RBP1.85□□□□□ -2.11
SCN2A-212ENST00000636662 MT1XP80297 61 aa1.84□□□□□ -2.11
SCN2A-212ENST00000636662 KRTAP17-1Q9BYP8 105 aa1.84□□□□□ -2.11
SCN2A-212ENST00000636662 MT1LQ93083 61 aa1.84□□□□□ -2.11
SCN2A-212ENST00000636662 LRP1Q07954 4544 aaKnown RBP1.84□□□□□ -2.12
SCN2A-212ENST00000636662 MT1HP80294 61 aa1.84□□□□□ -2.12
SCN2A-212ENST00000636662 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
SCN2A-212ENST00000636662 PLECQ15149 4684 aaKnown RBP1.82□□□□□ -2.12
SCN2A-212ENST00000636662 LCE2BO14633 110 aa1.81□□□□□ -2.12
SCN2A-212ENST00000636662 MT1EP04732 61 aa1.81□□□□□ -2.12
SCN2A-212ENST00000636662 SPRR2DP22532 72 aa1.81□□□□□ -2.12
SCN2A-212ENST00000636662 TNXBP22105 4242 aa1.8□□□□□ -2.12
SCN2A-212ENST00000636662 MT1FP04733 61 aa1.8□□□□□ -2.12
SCN2A-212ENST00000636662 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
SCN2A-212ENST00000636662 LCE4AQ5TA78 99 aa1.79□□□□□ -2.12
SCN2A-212ENST00000636662 DNHD1Q96M86 4753 aa1.78□□□□□ -2.12
SCN2A-212ENST00000636662 PCLOQ9Y6V0 5065 aa1.77□□□□□ -2.13
SCN2A-212ENST00000636662 STARD9Q9P2P6 4700 aa1.76□□□□□ -2.13
SCN2A-212ENST00000636662 MT1AP04731 61 aa1.76□□□□□ -2.13
SCN2A-212ENST00000636662 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
SCN2A-212ENST00000636662 LCE2CQ5TA81 110 aa1.74□□□□□ -2.13
SCN2A-212ENST00000636662 MT1BP07438 61 aa1.74□□□□□ -2.13
SCN2A-212ENST00000636662 HYDINQ4G0P3 5121 aa1.74□□□□□ -2.13
SCN2A-212ENST00000636662 LCE1DQ5T752 114 aa1.74□□□□□ -2.13
SCN2A-212ENST00000636662 HERC1Q15751 4861 aa1.72□□□□□ -2.13
SCN2A-212ENST00000636662 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.13
SCN2A-212ENST00000636662 FAT1Q14517 4588 aa1.71□□□□□ -2.14
SCN2A-212ENST00000636662 RYR1P21817 5038 aa1.7□□□□□ -2.14
SCN2A-212ENST00000636662 MYCBP2O75592 4640 aa1.69□□□□□ -2.14
SCN2A-212ENST00000636662 RYR3Q15413 4870 aa1.69□□□□□ -2.14
SCN2A-212ENST00000636662 LCE2AQ5TA79 106 aaPredicted RBP1.69□□□□□ -2.14
SCN2A-212ENST00000636662 KRTAP4-8A0A0G2JLE6 195 aa1.67□□□□□ -2.14
SCN2A-212ENST00000636662 MT4P47944 62 aa1.67□□□□□ -2.14
SCN2A-212ENST00000636662 KRTAP4-8Q9BYQ9 185 aa1.67□□□□□ -2.14
SCN2A-212ENST00000636662 KRTAP9-8Q9BYQ0 159 aa1.67□□□□□ -2.14
SCN2A-212ENST00000636662 ABCA13Q86UQ4 5058 aa1.67□□□□□ -2.14
SCN2A-212ENST00000636662 LCE5AQ5TCM9 118 aa1.67□□□□□ -2.14
SCN2A-212ENST00000636662 RYR2Q92736 4967 aa1.66□□□□□ -2.14
SCN2A-212ENST00000636662 KRTAP9-6A0A140TA67 174 aa1.66□□□□□ -2.14
SCN2A-212ENST00000636662 KRTAP4-7Q9BYR0 210 aa1.66□□□□□ -2.14
SCN2A-212ENST00000636662 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms