RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
SMARCA2-243ENST00000635590 DNAH6Q9C0G6 4158 aa3.93□□□□□ -1.78
SMARCA2-243ENST00000635590 MMP24-AS1A0A0U1RRL7 71 aa3.92□□□□□ -1.78
SMARCA2-243ENST00000635590 APLNQ9ULZ1 77 aa3.92□□□□□ -1.78
SMARCA2-243ENST00000635590 DYNC1H1Q14204 4646 aaKnown RBP3.91□□□□□ -1.78
SMARCA2-243ENST00000635590 DNAH17Q9UFH2 4485 aa3.91□□□□□ -1.78
SMARCA2-243ENST00000635590 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
SMARCA2-243ENST00000635590 LIMD2Q9BT23 127 aa3.91□□□□□ -1.78
SMARCA2-243ENST00000635590 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
SMARCA2-243ENST00000635590 PKHD1P08F94 4074 aa3.9□□□□□ -1.78
SMARCA2-243ENST00000635590 FAT2Q9NYQ8 4349 aa3.9□□□□□ -1.78
SMARCA2-243ENST00000635590 KRTAP13-1Q8IUC0 172 aa3.9□□□□□ -1.79
SMARCA2-243ENST00000635590 NBDYA0A0U1RRE5 68 aa3.88□□□□□ -1.79
SMARCA2-243ENST00000635590 DNAH2Q9P225 4427 aa3.88□□□□□ -1.79
SMARCA2-243ENST00000635590 Q5VV11 94 aa3.88□□□□□ -1.79
SMARCA2-243ENST00000635590 COA5Q86WW8 74 aa3.87□□□□□ -1.79
SMARCA2-243ENST00000635590 Q96NJ1 140 aa3.87□□□□□ -1.79
SMARCA2-243ENST00000635590 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
SMARCA2-243ENST00000635590 HERC1Q15751 4861 aa3.87□□□□□ -1.79
SMARCA2-243ENST00000635590 PKD1P98161 4303 aa3.87□□□□□ -1.79
SMARCA2-243ENST00000635590 HSPG2P98160 4391 aa3.86□□□□□ -1.79
SMARCA2-243ENST00000635590 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
SMARCA2-243ENST00000635590 PCOTHQ58A44 107 aa3.86□□□□□ -1.79
SMARCA2-243ENST00000635590 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
SMARCA2-243ENST00000635590 MRPL34Q9BQ48 92 aaKnown RBP3.84□□□□□ -1.79
SMARCA2-243ENST00000635590 LINC00304Q8N9R0 145 aa3.84□□□□□ -1.8
SMARCA2-243ENST00000635590 LOC101927531A0A1B0GV80 90 aa3.83□□□□□ -1.8
SMARCA2-243ENST00000635590 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
SMARCA2-243ENST00000635590 A0A087WTM6 91 aa3.82□□□□□ -1.8
SMARCA2-243ENST00000635590 SRRM2Q9UQ35 2752 aaKnown RBP3.82□□□□□ -1.8
SMARCA2-243ENST00000635590 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
SMARCA2-243ENST00000635590 SPTSSBQ8NFR3 76 aa3.8□□□□□ -1.8
SMARCA2-243ENST00000635590 PLAC8Q9NZF1 115 aa3.8□□□□□ -1.8
SMARCA2-243ENST00000635590 SPAG11AQ6PDA7 123 aa3.79□□□□□ -1.8
SMARCA2-243ENST00000635590 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
SMARCA2-243ENST00000635590 UBR4Q5T4S7 5183 aa3.78□□□□□ -1.8
SMARCA2-243ENST00000635590 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
SMARCA2-243ENST00000635590 APOBP04114 4563 aaKnown RBP3.78□□□□□ -1.81
SMARCA2-243ENST00000635590 SPINK6Q6UWN8 80 aa3.77□□□□□ -1.81
SMARCA2-243ENST00000635590 DNAH8Q96JB1 4490 aa3.77□□□□□ -1.81
SMARCA2-243ENST00000635590 DNAH5Q8TE73 4624 aa3.75□□□□□ -1.81
SMARCA2-243ENST00000635590 ACYP2P14621 99 aa3.74□□□□□ -1.81
SMARCA2-243ENST00000635590 SSBP3-AS1Q7Z2R9 100 aa3.74□□□□□ -1.81
SMARCA2-243ENST00000635590 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
SMARCA2-243ENST00000635590 KRTAP13-3Q3SY46 172 aa3.74□□□□□ -1.81
SMARCA2-243ENST00000635590 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
SMARCA2-243ENST00000635590 SPINK7P58062 85 aa3.72□□□□□ -1.81
SMARCA2-243ENST00000635590 Q5VSD8 79 aa3.71□□□□□ -1.82
SMARCA2-243ENST00000635590 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
SMARCA2-243ENST00000635590 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
SMARCA2-243ENST00000635590 VPS13BQ7Z7G8 4022 aa3.7□□□□□ -1.82
SMARCA2-243ENST00000635590 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
SMARCA2-243ENST00000635590 FAT1Q14517 4588 aa3.68□□□□□ -1.82
SMARCA2-243ENST00000635590 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
SMARCA2-243ENST00000635590 A0A1B0GU69 56 aa3.67□□□□□ -1.82
SMARCA2-243ENST00000635590 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
SMARCA2-243ENST00000635590 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.82
SMARCA2-243ENST00000635590 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
SMARCA2-243ENST00000635590 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
SMARCA2-243ENST00000635590 Q6ZSA8 131 aa3.61□□□□□ -1.83
SMARCA2-243ENST00000635590 UQCR11O14957 56 aa3.6□□□□□ -1.83
SMARCA2-243ENST00000635590 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
SMARCA2-243ENST00000635590 KRTAP10-8P60410 259 aa3.6□□□□□ -1.83
SMARCA2-243ENST00000635590 SPINK1P00995 79 aa3.58□□□□□ -1.84
SMARCA2-243ENST00000635590 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
SMARCA2-243ENST00000635590 RPS29P62273 56 aaKnown RBP3.54□□□□□ -1.84
SMARCA2-243ENST00000635590 LRP1Q07954 4544 aaKnown RBP3.53□□□□□ -1.84
SMARCA2-243ENST00000635590 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
SMARCA2-243ENST00000635590 KRTAP10-4P60372 401 aaPredicted RBP3.53□□□□□ -1.84
SMARCA2-243ENST00000635590 INE1O15225 51 aa3.52□□□□□ -1.85
SMARCA2-243ENST00000635590 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
SMARCA2-243ENST00000635590 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
SMARCA2-243ENST00000635590 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
SMARCA2-243ENST00000635590 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
SMARCA2-243ENST00000635590 LRP2P98164 4655 aa3.47□□□□□ -1.85
SMARCA2-243ENST00000635590 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
SMARCA2-243ENST00000635590 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
SMARCA2-243ENST00000635590 TNXBP22105 4242 aa3.44□□□□□ -1.86
SMARCA2-243ENST00000635590 H0YAA0 97 aa3.43□□□□□ -1.86
SMARCA2-243ENST00000635590 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
SMARCA2-243ENST00000635590 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
SMARCA2-243ENST00000635590 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.87
SMARCA2-243ENST00000635590 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SMARCA2-243ENST00000635590 FAT4Q6V0I7 4981 aa3.35□□□□□ -1.87
SMARCA2-243ENST00000635590 MUC2Q02817 5179 aa3.32□□□□□ -1.88
SMARCA2-243ENST00000635590 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
SMARCA2-243ENST00000635590 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
SMARCA2-243ENST00000635590 S4R3F8 94 aa3.29□□□□□ -1.88
SMARCA2-243ENST00000635590 LPAP08519 4548 aa3.29□□□□□ -1.88
SMARCA2-243ENST00000635590 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
SMARCA2-243ENST00000635590 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
SMARCA2-243ENST00000635590 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
SMARCA2-243ENST00000635590 A0A0D9SG42 100 aa3.25□□□□□ -1.89
SMARCA2-243ENST00000635590 CRIPTQ9P021 101 aa3.24□□□□□ -1.89
SMARCA2-243ENST00000635590 KRTAP12-1P59990 96 aa3.23□□□□□ -1.89
SMARCA2-243ENST00000635590 CRCT1Q9UGL9 99 aa3.23□□□□□ -1.89
SMARCA2-243ENST00000635590 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
SMARCA2-243ENST00000635590 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
SMARCA2-243ENST00000635590 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
SMARCA2-243ENST00000635590 M0QZ58 72 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms