RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 F8WEM9 126 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 H3BUT2 72 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 KRTAP12-1P59990 96 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 LYRM7Q5U5X0 104 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 TEN1Q86WV5 123 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 COPS9Q8WXC6 57 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 IMUPQ9GZP8 106 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 LINC00472Q9H8W2 130 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 SS18L2Q9UHA2 77 aa0.98□□□□□ -2.25
SMARCB1-208ENST00000634926 A0A087WSZ3 146 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 TRBV7-4A0A0J9YYF1 115 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 Q1T7F1 81 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 Q6ZQT0 140 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 COA5Q86WW8 74 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 HIST1H2BLQ99880 126 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 LINC00846Q9NV44 126 aa0.97□□□□□ -2.25
SMARCB1-208ENST00000634926 ATOH7Q8N100 152 aa0.96□□□□□ -2.26
SMARCB1-208ENST00000634926 RAB37Q96AX2 223 aa0.96□□□□□ -2.26
SMARCB1-208ENST00000634926 GPR98Q8WXG9 6306 aa0.96□□□□□ -2.26
SMARCB1-208ENST00000634926 A0A1B0GX51 115 aa0.95□□□□□ -2.26
SMARCB1-208ENST00000634926 SPINK7P58062 85 aa0.95□□□□□ -2.26
SMARCB1-208ENST00000634926 KRTDAPP60985 99 aa0.95□□□□□ -2.26
SMARCB1-208ENST00000634926 BVES-AS1Q5T3Y7 98 aa0.95□□□□□ -2.26
SMARCB1-208ENST00000634926 WFDC13Q8IUB5 93 aa0.95□□□□□ -2.26
SMARCB1-208ENST00000634926 DSTQ03001 7570 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-208ENST00000634926 A6NN06 94 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 H3BMG7 143 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 DLEU1O43261 78 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 COX8AP10176 69 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 SMIM20Q8N5G0 67 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 C12orf57Q99622 126 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 SNHG12Q9BXW3 62 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
SMARCB1-208ENST00000634926 H0YGX0 51 aa0.93□□□□□ -2.26
SMARCB1-208ENST00000634926 TAX1BP3O14907 124 aa0.93□□□□□ -2.26
SMARCB1-208ENST00000634926 BAALC-AS2P0C853 105 aa0.93□□□□□ -2.26
SMARCB1-208ENST00000634926 H1FX-AS1Q4G0G2 97 aa0.93□□□□□ -2.26
SMARCB1-208ENST00000634926 Q5VV11 94 aa0.93□□□□□ -2.26
SMARCB1-208ENST00000634926 HIGD1BQ9P298 99 aa0.93□□□□□ -2.26
SMARCB1-208ENST00000634926 IGKV3D-7A0A0C4DH55 119 aa0.92□□□□□ -2.26
SMARCB1-208ENST00000634926 MMP24-AS1A0A0U1RRL7 71 aa0.92□□□□□ -2.26
SMARCB1-208ENST00000634926 CCKP06307 115 aa0.92□□□□□ -2.26
SMARCB1-208ENST00000634926 NAA38Q9BRA0 125 aaKnown RBP0.92□□□□□ -2.26
SMARCB1-208ENST00000634926 CYSTM1Q9H1C7 97 aa0.92□□□□□ -2.26
SMARCB1-208ENST00000634926 J3KT08 172 aa0.91□□□□□ -2.26
SMARCB1-208ENST00000634926 TMEM256-PLSCR3K7ERE1 68 aa0.91□□□□□ -2.26
SMARCB1-208ENST00000634926 TRACP01848 142 aa0.91□□□□□ -2.26
SMARCB1-208ENST00000634926 MT1XP80297 61 aa0.91□□□□□ -2.26
SMARCB1-208ENST00000634926 KRTAP2-1Q9BYU5 128 aa0.91□□□□□ -2.26
SMARCB1-208ENST00000634926 ORMDL1Q9P0S3 153 aa0.91□□□□□ -2.26
SMARCB1-208ENST00000634926 LOC110117498A0A087WWA1 95 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 A0A1B0GV72 72 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 K7ERJ3 54 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 FABP2P12104 132 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 SPRR2EP22531 72 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 SPRR2BP35325 72 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 SPRR2AP35326 72 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 KLKP1Q107X0 134 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 PRR15Q8IV56 129 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 TMEM254Q8TBM7 123 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 C14orf132Q9NPU4 83 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 PRO1854Q9UHT4 67 aa0.9□□□□□ -2.27
SMARCB1-208ENST00000634926 C14orf144Q96I85 54 aa0.89□□□□□ -2.27
SMARCB1-208ENST00000634926 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
SMARCB1-208ENST00000634926 K7EQZ3 153 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 SNCGO76070 127 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 DNAL4O96015 105 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 ROMO1P60602 79 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 RBM3P98179 157 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 HSD52Q0P140 79 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 SPATA45Q537H7 98 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 DSCR8Q96T75 97 aa0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
SMARCB1-208ENST00000634926 hDV103S1A0JD37 113 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 C9JAW5 83 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 H0YAA0 97 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 NDUFB1O75438 58 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 SPRR2DP22532 72 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 VAMP8Q9BV40 100 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 S4R3F8 94 aa0.87□□□□□ -2.27
SMARCB1-208ENST00000634926 A0A087WVE0 104 aa0.86□□□□□ -2.27
SMARCB1-208ENST00000634926 PYY3Q5JQD4 70 aa0.86□□□□□ -2.27
SMARCB1-208ENST00000634926 VPS25Q9BRG1 176 aa0.86□□□□□ -2.27
SMARCB1-208ENST00000634926 FAM236AA0A1B0GUQ0 79 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 FAM236BA0A1B0GV22 79 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 JMJD7-PLA2G4BH0Y9G9 81 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 COX6CP09669 75 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 PDE6GP18545 87 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 CSAG1Q6PB30 78 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 SNURFQ9Y675 71 aa0.85□□□□□ -2.27
SMARCB1-208ENST00000634926 HCG22E2RYF7 251 aa0.84□□□□□ -2.27
SMARCB1-208ENST00000634926 CASC2Q6XLA1 102 aa0.84□□□□□ -2.27
SMARCB1-208ENST00000634926 ATXN8Q156A1 80 aa0.83□□□□□ -2.28
SMARCB1-208ENST00000634926 NREPQ16612 68 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms