RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 LCE1AQ5T7P2 110 aa5.46□□□□□ -1.54
LINC00339-206ENST00000634451 MT1XP80297 61 aa5.45□□□□□ -1.54
LINC00339-206ENST00000634451 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
LINC00339-206ENST00000634451 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
LINC00339-206ENST00000634451 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
LINC00339-206ENST00000634451 H3BT86 120 aa5.42□□□□□ -1.54
LINC00339-206ENST00000634451 BATFQ16520 125 aa5.41□□□□□ -1.54
LINC00339-206ENST00000634451 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
LINC00339-206ENST00000634451 CRIPTQ9P021 101 aa5.4□□□□□ -1.54
LINC00339-206ENST00000634451 TSTD3H0UI37 97 aa5.39□□□□□ -1.55
LINC00339-206ENST00000634451 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
LINC00339-206ENST00000634451 SPRR2DP22532 72 aa5.37□□□□□ -1.55
LINC00339-206ENST00000634451 K7EP34 96 aa5.35□□□□□ -1.55
LINC00339-206ENST00000634451 C9orf118A6NHY6 69 aa5.34□□□□□ -1.55
LINC00339-206ENST00000634451 TAX1BP3O14907 124 aa5.34□□□□□ -1.55
LINC00339-206ENST00000634451 A0A1W2PPM0 123 aa5.33□□□□□ -1.56
LINC00339-206ENST00000634451 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
LINC00339-206ENST00000634451 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
LINC00339-206ENST00000634451 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
LINC00339-206ENST00000634451 A8MUN3 132 aa5.28□□□□□ -1.56
LINC00339-206ENST00000634451 UBL5Q9BZL1 73 aa5.28□□□□□ -1.56
LINC00339-206ENST00000634451 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
LINC00339-206ENST00000634451 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
LINC00339-206ENST00000634451 H0YAA0 97 aa5.26□□□□□ -1.57
LINC00339-206ENST00000634451 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
LINC00339-206ENST00000634451 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
LINC00339-206ENST00000634451 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
LINC00339-206ENST00000634451 PRO0461Q9UI25 63 aa5.23□□□□□ -1.57
LINC00339-206ENST00000634451 NDUFC1O43677 76 aa5.22□□□□□ -1.57
LINC00339-206ENST00000634451 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
LINC00339-206ENST00000634451 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
LINC00339-206ENST00000634451 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
LINC00339-206ENST00000634451 SMIM6P0DI80 62 aa5.19□□□□□ -1.58
LINC00339-206ENST00000634451 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
LINC00339-206ENST00000634451 LOC101927531A0A1B0GV80 90 aa5.18□□□□□ -1.58
LINC00339-206ENST00000634451 P0C880 135 aa5.18□□□□□ -1.58
LINC00339-206ENST00000634451 LOC105371267A0A1B0GV96 52 aa5.17□□□□□ -1.58
LINC00339-206ENST00000634451 M0QZ58 72 aa5.12□□□□□ -1.59
LINC00339-206ENST00000634451 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
LINC00339-206ENST00000634451 R4GN34 69 aa5.11□□□□□ -1.59
LINC00339-206ENST00000634451 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
LINC00339-206ENST00000634451 H0Y9P7 68 aa5.09□□□□□ -1.59
LINC00339-206ENST00000634451 ACYP1P07311 99 aa5.08□□□□□ -1.6
LINC00339-206ENST00000634451 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
LINC00339-206ENST00000634451 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
LINC00339-206ENST00000634451 UQCRQO14949 82 aa5.03□□□□□ -1.6
LINC00339-206ENST00000634451 ETDBQ3ZM63 59 aa5.03□□□□□ -1.6
LINC00339-206ENST00000634451 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
LINC00339-206ENST00000634451 ATOX1O00244 68 aa4.99□□□□□ -1.61
LINC00339-206ENST00000634451 LINC00208Q96KT6 92 aa4.98□□□□□ -1.61
LINC00339-206ENST00000634451 HIST1H4AP62805 103 aaKnown RBP4.97□□□□□ -1.61
LINC00339-206ENST00000634451 COL5A1-AS1Q5SY13 56 aa4.97□□□□□ -1.61
LINC00339-206ENST00000634451 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
LINC00339-206ENST00000634451 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
LINC00339-206ENST00000634451 PCP4L1A6NKN8 68 aa4.93□□□□□ -1.62
LINC00339-206ENST00000634451 F8W1H4 67 aa4.9□□□□□ -1.63
LINC00339-206ENST00000634451 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
LINC00339-206ENST00000634451 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
LINC00339-206ENST00000634451 GTF2H5Q6ZYL4 71 aa4.87□□□□□ -1.63
LINC00339-206ENST00000634451 ATP5EP2Q5VTU8 51 aa4.86□□□□□ -1.63
LINC00339-206ENST00000634451 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
LINC00339-206ENST00000634451 OCR1Q9BZK8 76 aa4.86□□□□□ -1.63
LINC00339-206ENST00000634451 MT-ATP8P03928 68 aa4.83□□□□□ -1.64
LINC00339-206ENST00000634451 MT1EP04732 61 aa4.83□□□□□ -1.64
LINC00339-206ENST00000634451 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
LINC00339-206ENST00000634451 MP68P56378 58 aa4.82□□□□□ -1.64
LINC00339-206ENST00000634451 FAM240AA0A1B0GVK7 77 aa4.79□□□□□ -1.64
LINC00339-206ENST00000634451 H3BS24 57 aa4.79□□□□□ -1.64
LINC00339-206ENST00000634451 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
LINC00339-206ENST00000634451 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
LINC00339-206ENST00000634451 MT4P47944 62 aa4.77□□□□□ -1.65
LINC00339-206ENST00000634451 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
LINC00339-206ENST00000634451 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
LINC00339-206ENST00000634451 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
LINC00339-206ENST00000634451 LINC00643Q86TS7 51 aa4.72□□□□□ -1.65
LINC00339-206ENST00000634451 CYSTM1Q9H1C7 97 aa4.72□□□□□ -1.65
LINC00339-206ENST00000634451 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
LINC00339-206ENST00000634451 A0A1B0GV90 55 aa4.67□□□□□ -1.66
LINC00339-206ENST00000634451 H3BPC8 53 aa4.67□□□□□ -1.66
LINC00339-206ENST00000634451 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
LINC00339-206ENST00000634451 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
LINC00339-206ENST00000634451 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
LINC00339-206ENST00000634451 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
LINC00339-206ENST00000634451 MT1MQ8N339 61 aa4.63□□□□□ -1.67
LINC00339-206ENST00000634451 MT1GP13640 62 aa4.62□□□□□ -1.67
LINC00339-206ENST00000634451 ACYP2P14621 99 aa4.61□□□□□ -1.67
LINC00339-206ENST00000634451 A0A0D9SG42 100 aa4.59□□□□□ -1.67
LINC00339-206ENST00000634451 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
LINC00339-206ENST00000634451 SPTSSBQ8NFR3 76 aa4.56□□□□□ -1.68
LINC00339-206ENST00000634451 MT1LQ93083 61 aa4.56□□□□□ -1.68
LINC00339-206ENST00000634451 SCGB1A1P11684 91 aa4.55□□□□□ -1.68
LINC00339-206ENST00000634451 CHKB-CPT1BH3BT56 60 aa4.54□□□□□ -1.68
LINC00339-206ENST00000634451 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
LINC00339-206ENST00000634451 J3QR89 54 aa4.52□□□□□ -1.69
LINC00339-206ENST00000634451 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
LINC00339-206ENST00000634451 K7ERU9 68 aa4.47□□□□□ -1.69
LINC00339-206ENST00000634451 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
LINC00339-206ENST00000634451 SNURFQ9Y675 71 aa4.43□□□□□ -1.7
LINC00339-206ENST00000634451 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
LINC00339-206ENST00000634451 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms