RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-223ENST00000630866 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
SPTAN1-223ENST00000630866 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
SPTAN1-223ENST00000630866 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
SPTAN1-223ENST00000630866 DNAH9Q9NYC9 4486 aa3.71□□□□□ -1.82
SPTAN1-223ENST00000630866 CSMD3Q7Z407 3707 aa3.71□□□□□ -1.82
SPTAN1-223ENST00000630866 KRTAP3-2Q9BYR7 98 aa3.7□□□□□ -1.82
SPTAN1-223ENST00000630866 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
SPTAN1-223ENST00000630866 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
SPTAN1-223ENST00000630866 MT1HP80294 61 aa3.61□□□□□ -1.83
SPTAN1-223ENST00000630866 PRKDCP78527 4128 aaKnown RBP3.61□□□□□ -1.83
SPTAN1-223ENST00000630866 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
SPTAN1-223ENST00000630866 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SPTAN1-223ENST00000630866 ANK2Q01484 3957 aa3.57□□□□□ -1.84
SPTAN1-223ENST00000630866 DNAH5Q8TE73 4624 aa3.57□□□□□ -1.84
SPTAN1-223ENST00000630866 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
SPTAN1-223ENST00000630866 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
SPTAN1-223ENST00000630866 CMYA5Q8N3K9 4069 aa3.52□□□□□ -1.85
SPTAN1-223ENST00000630866 SPRR2EP22531 72 aa3.5□□□□□ -1.85
SPTAN1-223ENST00000630866 SPRR2BP35325 72 aa3.5□□□□□ -1.85
SPTAN1-223ENST00000630866 SPRR2AP35326 72 aa3.5□□□□□ -1.85
SPTAN1-223ENST00000630866 PLECQ15149 4684 aaKnown RBP3.5□□□□□ -1.85
SPTAN1-223ENST00000630866 MT2AP02795 61 aa3.5□□□□□ -1.85
SPTAN1-223ENST00000630866 DNAH11Q96DT5 4516 aa3.49□□□□□ -1.85
SPTAN1-223ENST00000630866 KMT2AQ03164 3969 aa3.48□□□□□ -1.85
SPTAN1-223ENST00000630866 DNAH10Q8IVF4 4471 aa3.48□□□□□ -1.85
SPTAN1-223ENST00000630866 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
SPTAN1-223ENST00000630866 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
SPTAN1-223ENST00000630866 DNHD1Q96M86 4753 aa3.45□□□□□ -1.86
SPTAN1-223ENST00000630866 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
SPTAN1-223ENST00000630866 VPS13DQ5THJ4 4388 aa3.44□□□□□ -1.86
SPTAN1-223ENST00000630866 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
SPTAN1-223ENST00000630866 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
SPTAN1-223ENST00000630866 MT1FP04733 61 aa3.41□□□□□ -1.86
SPTAN1-223ENST00000630866 LRP1BQ9NZR2 4599 aa3.41□□□□□ -1.86
SPTAN1-223ENST00000630866 LYSTQ99698 3801 aa3.4□□□□□ -1.86
SPTAN1-223ENST00000630866 DYNC2H1Q8NCM8 4307 aaKnown RBP3.39□□□□□ -1.87
SPTAN1-223ENST00000630866 SPRR2DP22532 72 aa3.39□□□□□ -1.87
SPTAN1-223ENST00000630866 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
SPTAN1-223ENST00000630866 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
SPTAN1-223ENST00000630866 DNAH17Q9UFH2 4485 aa3.37□□□□□ -1.87
SPTAN1-223ENST00000630866 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
SPTAN1-223ENST00000630866 STARD9Q9P2P6 4700 aa3.35□□□□□ -1.87
SPTAN1-223ENST00000630866 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
SPTAN1-223ENST00000630866 FAT1Q14517 4588 aa3.33□□□□□ -1.88
SPTAN1-223ENST00000630866 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
SPTAN1-223ENST00000630866 RYR1P21817 5038 aa3.29□□□□□ -1.88
SPTAN1-223ENST00000630866 SACSQ9NZJ4 4579 aa3.29□□□□□ -1.88
SPTAN1-223ENST00000630866 LCE2BO14633 110 aa3.27□□□□□ -1.89
SPTAN1-223ENST00000630866 DNAH8Q96JB1 4490 aa3.26□□□□□ -1.89
SPTAN1-223ENST00000630866 FRAS1Q86XX4 4008 aa3.22□□□□□ -1.89
SPTAN1-223ENST00000630866 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
SPTAN1-223ENST00000630866 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
SPTAN1-223ENST00000630866 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
SPTAN1-223ENST00000630866 PKHD1L1Q86WI1 4243 aa3.19□□□□□ -1.9
SPTAN1-223ENST00000630866 LCE2CQ5TA81 110 aa3.19□□□□□ -1.9
SPTAN1-223ENST00000630866 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
SPTAN1-223ENST00000630866 PKHD1P08F94 4074 aa3.18□□□□□ -1.9
SPTAN1-223ENST00000630866 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
SPTAN1-223ENST00000630866 HECTD4Q9Y4D8 3996 aa3.17□□□□□ -1.9
SPTAN1-223ENST00000630866 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
SPTAN1-223ENST00000630866 APOBP04114 4563 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-223ENST00000630866 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
SPTAN1-223ENST00000630866 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
SPTAN1-223ENST00000630866 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.9
SPTAN1-223ENST00000630866 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.91
SPTAN1-223ENST00000630866 RYR3Q15413 4870 aa3.13□□□□□ -1.91
SPTAN1-223ENST00000630866 MT4P47944 62 aa3.13□□□□□ -1.91
SPTAN1-223ENST00000630866 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
SPTAN1-223ENST00000630866 HERC1Q15751 4861 aa3.09□□□□□ -1.92
SPTAN1-223ENST00000630866 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.92
SPTAN1-223ENST00000630866 MT1XP80297 61 aa3.07□□□□□ -1.92
SPTAN1-223ENST00000630866 HSPG2P98160 4391 aa3.06□□□□□ -1.92
SPTAN1-223ENST00000630866 MYCBP2O75592 4640 aa3.06□□□□□ -1.92
SPTAN1-223ENST00000630866 MT1BP07438 61 aa3.05□□□□□ -1.92
SPTAN1-223ENST00000630866 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
SPTAN1-223ENST00000630866 MT1GP13640 62 aa3.02□□□□□ -1.93
SPTAN1-223ENST00000630866 PKD1P98161 4303 aa3.01□□□□□ -1.93
SPTAN1-223ENST00000630866 KRTAP4-8A0A0G2JLE6 195 aa3□□□□□ -1.93
SPTAN1-223ENST00000630866 KRTAP4-8Q9BYQ9 185 aa3□□□□□ -1.93
SPTAN1-223ENST00000630866 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
SPTAN1-223ENST00000630866 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SPTAN1-223ENST00000630866 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
SPTAN1-223ENST00000630866 RYR2Q92736 4967 aa2.96□□□□□ -1.94
SPTAN1-223ENST00000630866 HERC2O95714 4834 aa2.95□□□□□ -1.94
SPTAN1-223ENST00000630866 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
SPTAN1-223ENST00000630866 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SPTAN1-223ENST00000630866 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SPTAN1-223ENST00000630866 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
SPTAN1-223ENST00000630866 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.94
SPTAN1-223ENST00000630866 LPAP08519 4548 aa2.9□□□□□ -1.95
SPTAN1-223ENST00000630866 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
SPTAN1-223ENST00000630866 LRP2P98164 4655 aa2.88□□□□□ -1.95
SPTAN1-223ENST00000630866 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
SPTAN1-223ENST00000630866 PCLOQ9Y6V0 5065 aa2.85□□□□□ -1.95
SPTAN1-223ENST00000630866 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
SPTAN1-223ENST00000630866 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
SPTAN1-223ENST00000630866 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
SPTAN1-223ENST00000630866 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.96
SPTAN1-223ENST00000630866 KMT2CQ8NEZ4 4911 aaKnown RBP2.83□□□□□ -1.96
SPTAN1-223ENST00000630866 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms