RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-222ENST00000630804 KRTAP3-2Q9BYR7 98 aa3.55□□□□□ -1.84
SPTAN1-222ENST00000630804 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
SPTAN1-222ENST00000630804 KRTAP3-3Q9BYR6 98 aa3.55□□□□□ -1.84
SPTAN1-222ENST00000630804 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
SPTAN1-222ENST00000630804 CMYA5Q8N3K9 4069 aa3.52□□□□□ -1.85
SPTAN1-222ENST00000630804 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
SPTAN1-222ENST00000630804 KRTAP4-5Q9BYR2 181 aa3.5□□□□□ -1.85
SPTAN1-222ENST00000630804 LORP23490 312 aaPredicted RBP3.5□□□□□ -1.85
SPTAN1-222ENST00000630804 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
SPTAN1-222ENST00000630804 ANK2Q01484 3957 aa3.49□□□□□ -1.85
SPTAN1-222ENST00000630804 LYSTQ99698 3801 aa3.4□□□□□ -1.86
SPTAN1-222ENST00000630804 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
SPTAN1-222ENST00000630804 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
SPTAN1-222ENST00000630804 DNAH1Q9P2D7 4330 aa3.36□□□□□ -1.87
SPTAN1-222ENST00000630804 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.88
SPTAN1-222ENST00000630804 DNAH6Q9C0G6 4158 aa3.33□□□□□ -1.88
SPTAN1-222ENST00000630804 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
SPTAN1-222ENST00000630804 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
SPTAN1-222ENST00000630804 PRKDCP78527 4128 aaKnown RBP3.25□□□□□ -1.89
SPTAN1-222ENST00000630804 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
SPTAN1-222ENST00000630804 VPS13BQ7Z7G8 4022 aa3.25□□□□□ -1.89
SPTAN1-222ENST00000630804 KMT2AQ03164 3969 aa3.25□□□□□ -1.89
SPTAN1-222ENST00000630804 MT1HP80294 61 aa3.22□□□□□ -1.89
SPTAN1-222ENST00000630804 HECTD4Q9Y4D8 3996 aa3.22□□□□□ -1.89
SPTAN1-222ENST00000630804 DNAH9Q9NYC9 4486 aa3.2□□□□□ -1.9
SPTAN1-222ENST00000630804 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
SPTAN1-222ENST00000630804 DNAH11Q96DT5 4516 aa3.19□□□□□ -1.9
SPTAN1-222ENST00000630804 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
SPTAN1-222ENST00000630804 MT2AP02795 61 aa3.16□□□□□ -1.9
SPTAN1-222ENST00000630804 SPRR2EP22531 72 aa3.16□□□□□ -1.9
SPTAN1-222ENST00000630804 SPRR2BP35325 72 aa3.16□□□□□ -1.9
SPTAN1-222ENST00000630804 SPRR2AP35326 72 aa3.16□□□□□ -1.9
SPTAN1-222ENST00000630804 DYNC2H1Q8NCM8 4307 aaKnown RBP3.15□□□□□ -1.91
SPTAN1-222ENST00000630804 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
SPTAN1-222ENST00000630804 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
SPTAN1-222ENST00000630804 VPS13DQ5THJ4 4388 aa3.13□□□□□ -1.91
SPTAN1-222ENST00000630804 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
SPTAN1-222ENST00000630804 DNAH17Q9UFH2 4485 aa3.09□□□□□ -1.91
SPTAN1-222ENST00000630804 DNAH5Q8TE73 4624 aa3.09□□□□□ -1.91
SPTAN1-222ENST00000630804 SPRR2DP22532 72 aa3.07□□□□□ -1.92
SPTAN1-222ENST00000630804 FAT2Q9NYQ8 4349 aa3.06□□□□□ -1.92
SPTAN1-222ENST00000630804 MT1FP04733 61 aa3.06□□□□□ -1.92
SPTAN1-222ENST00000630804 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
SPTAN1-222ENST00000630804 PLECQ15149 4684 aaKnown RBP3.05□□□□□ -1.92
SPTAN1-222ENST00000630804 KRTAP12-4P60329 112 aa3.03□□□□□ -1.93
SPTAN1-222ENST00000630804 LCE2BO14633 110 aa3□□□□□ -1.93
SPTAN1-222ENST00000630804 STARD9Q9P2P6 4700 aa2.97□□□□□ -1.93
SPTAN1-222ENST00000630804 FAT1Q14517 4588 aa2.96□□□□□ -1.93
SPTAN1-222ENST00000630804 LRP1BQ9NZR2 4599 aa2.94□□□□□ -1.94
SPTAN1-222ENST00000630804 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
SPTAN1-222ENST00000630804 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
SPTAN1-222ENST00000630804 PKD1P98161 4303 aa2.89□□□□□ -1.95
SPTAN1-222ENST00000630804 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
SPTAN1-222ENST00000630804 MT1GP13640 62 aa2.87□□□□□ -1.95
SPTAN1-222ENST00000630804 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
SPTAN1-222ENST00000630804 LCE2CQ5TA81 110 aa2.87□□□□□ -1.95
SPTAN1-222ENST00000630804 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
SPTAN1-222ENST00000630804 DNHD1Q96M86 4753 aa2.86□□□□□ -1.95
SPTAN1-222ENST00000630804 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
SPTAN1-222ENST00000630804 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.95
SPTAN1-222ENST00000630804 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.96
SPTAN1-222ENST00000630804 KRTAP17-1Q9BYP8 105 aa2.84□□□□□ -1.96
SPTAN1-222ENST00000630804 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
SPTAN1-222ENST00000630804 DYNC1H1Q14204 4646 aaKnown RBP2.81□□□□□ -1.96
SPTAN1-222ENST00000630804 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
SPTAN1-222ENST00000630804 LCE2DQ5TA82 110 aaPredicted RBP2.81□□□□□ -1.96
SPTAN1-222ENST00000630804 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
SPTAN1-222ENST00000630804 MT1XP80297 61 aa2.8□□□□□ -1.96
SPTAN1-222ENST00000630804 TNXBP22105 4242 aa2.79□□□□□ -1.96
SPTAN1-222ENST00000630804 RYR1P21817 5038 aa2.79□□□□□ -1.96
SPTAN1-222ENST00000630804 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
SPTAN1-222ENST00000630804 MT1BP07438 61 aa2.75□□□□□ -1.97
SPTAN1-222ENST00000630804 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
SPTAN1-222ENST00000630804 MT3P25713 68 aa2.74□□□□□ -1.97
SPTAN1-222ENST00000630804 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
SPTAN1-222ENST00000630804 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
SPTAN1-222ENST00000630804 MT4P47944 62 aa2.7□□□□□ -1.98
SPTAN1-222ENST00000630804 PRM1P04553 51 aa2.67□□□□□ -1.98
SPTAN1-222ENST00000630804 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
SPTAN1-222ENST00000630804 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
SPTAN1-222ENST00000630804 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
SPTAN1-222ENST00000630804 LPAP08519 4548 aa2.67□□□□□ -1.98
SPTAN1-222ENST00000630804 HSPG2P98160 4391 aa2.66□□□□□ -1.98
SPTAN1-222ENST00000630804 MT1LQ93083 61 aa2.64□□□□□ -1.99
SPTAN1-222ENST00000630804 RYR3Q15413 4870 aa2.63□□□□□ -1.99
SPTAN1-222ENST00000630804 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
SPTAN1-222ENST00000630804 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
SPTAN1-222ENST00000630804 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
SPTAN1-222ENST00000630804 MT1EP04732 61 aa2.56□□□□□ -2
SPTAN1-222ENST00000630804 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
SPTAN1-222ENST00000630804 LRP2P98164 4655 aa2.53□□□□□ -2
SPTAN1-222ENST00000630804 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
SPTAN1-222ENST00000630804 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
SPTAN1-222ENST00000630804 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
SPTAN1-222ENST00000630804 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
SPTAN1-222ENST00000630804 MT1MQ8N339 61 aa2.5□□□□□ -2.01
SPTAN1-222ENST00000630804 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
SPTAN1-222ENST00000630804 MUC17Q685J3 4493 aa2.47□□□□□ -2.01
SPTAN1-222ENST00000630804 RYR2Q92736 4967 aa2.47□□□□□ -2.01
SPTAN1-222ENST00000630804 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms