RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 H3BUT2 72 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 SRP19P09132 144 aaKnown RBP0.33□□□□□ -2.36
VBP1-204ENST00000625964 CEBPGP53567 150 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 NPC2P61916 151 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 IFITM2Q01629 132 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 BAGE3Q86Y29 109 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 SNHG12Q9BXW3 62 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 LINC00472Q9H8W2 130 aa0.33□□□□□ -2.36
VBP1-204ENST00000625964 LOC110117498A0A087WWA1 95 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 LINC01546A6NGU7 62 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 Q6ZQY7 126 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 PPDPFLQ8WWR9 84 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 SMIM7Q9BQ49 75 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 C10orf95Q9H7T3 257 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 BATF3Q9NR55 127 aa0.32□□□□□ -2.36
VBP1-204ENST00000625964 hADV29S1A0JD25 119 aa0.31□□□□□ -2.36
VBP1-204ENST00000625964 M0QZ58 72 aa0.31□□□□□ -2.36
VBP1-204ENST00000625964 ARPC5O15511 151 aa0.31□□□□□ -2.36
VBP1-204ENST00000625964 LINC01554Q52M75 96 aa0.31□□□□□ -2.36
VBP1-204ENST00000625964 LINC00575Q6W349 94 aa0.31□□□□□ -2.36
VBP1-204ENST00000625964 LINC00308Q8TCZ7 52 aa0.31□□□□□ -2.36
VBP1-204ENST00000625964 A0A0D9SG42 100 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 TRBV7-4A0A0J9YYF1 115 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 hDV103S1A0JD37 113 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 H3BMG7 143 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 J3KT08 172 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 NDUFB1O75438 58 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 MT1AP04731 61 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 ADIRFQ15847 76 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 BATFQ16520 125 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 KRTAP6-1Q3LI64 71 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 SMCO4Q9NRQ5 59 aa0.3□□□□□ -2.36
VBP1-204ENST00000625964 A0A087WVE0 104 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 TRAV12-1A0A0B4J245 112 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 KANTRA0A1W2PQU2 76 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 HCG22E2RYF7 251 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 NDUFC1O43677 76 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 TIMM17BO60830 172 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 TRGC2P03986 189 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 MUSTN1Q8IVN3 82 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 TMEM254Q8TBM7 123 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 SMIM11BQ8TCY0 68 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 C12orf57Q99622 126 aa0.29□□□□□ -2.36
VBP1-204ENST00000625964 MRPL34Q9BQ48 92 aaKnown RBP0.29□□□□□ -2.36
VBP1-204ENST00000625964 A0A1W2PPM0 123 aa0.28□□□□□ -2.36
VBP1-204ENST00000625964 TRACP01848 142 aa0.28□□□□□ -2.36
VBP1-204ENST00000625964 TCTE3Q8IZS6 198 aa0.28□□□□□ -2.36
VBP1-204ENST00000625964 C20orf197Q8N268 126 aa0.28□□□□□ -2.36
VBP1-204ENST00000625964 ANKRD29Q8N6D5 301 aa0.28□□□□□ -2.36
VBP1-204ENST00000625964 IFITM1P13164 125 aa0.28□□□□□ -2.37
VBP1-204ENST00000625964 PMCHL1Q16048 86 aa0.28□□□□□ -2.37
VBP1-204ENST00000625964 IFI27L1Q96BM0 104 aa0.28□□□□□ -2.37
VBP1-204ENST00000625964 HSPB8Q9UJY1 196 aa0.28□□□□□ -2.37
VBP1-204ENST00000625964 MMP24-AS1A0A0U1RRL7 71 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 SNCGO76070 127 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 MT-ATP8P03928 68 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 CCKP06307 115 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 FABP2P12104 132 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 PLNP26678 52 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 SPATA8Q6RVD6 105 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 Q6ZQT0 140 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 C18orf32Q8TCD1 76 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 COPS9Q8WXC6 57 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 S100ZQ8WXG8 99 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 SEC11CQ9BY50 192 aa0.27□□□□□ -2.37
VBP1-204ENST00000625964 DPM2O94777 84 aa0.26□□□□□ -2.37
VBP1-204ENST00000625964 IGKCP01834 107 aa0.26□□□□□ -2.37
VBP1-204ENST00000625964 MT-ND4LP03901 98 aa0.26□□□□□ -2.37
VBP1-204ENST00000625964 BVES-AS1Q5T3Y7 98 aa0.26□□□□□ -2.37
VBP1-204ENST00000625964 H0YGX0 51 aa0.25□□□□□ -2.37
VBP1-204ENST00000625964 PEA15Q15121 130 aa0.25□□□□□ -2.37
VBP1-204ENST00000625964 PMCHL2Q9BQD1 86 aa0.25□□□□□ -2.37
VBP1-204ENST00000625964 VPS25Q9BRG1 176 aa0.25□□□□□ -2.37
VBP1-204ENST00000625964 A0A1B0GV72 72 aa0.24□□□□□ -2.37
VBP1-204ENST00000625964 A0A1B0GX51 115 aa0.24□□□□□ -2.37
VBP1-204ENST00000625964 LEPROTL1O95214 131 aa0.24□□□□□ -2.37
VBP1-204ENST00000625964 CHCHD1Q96BP2 118 aaKnown RBP0.24□□□□□ -2.37
VBP1-204ENST00000625964 TMEM256-PLSCR3K7ERE1 68 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 ACYP1P07311 99 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 CASC2Q6XLA1 102 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 CYP4F30PQ9H0H9 118 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 ORMDL1Q9P0S3 153 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 C9JAW5 83 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 K7EP34 96 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 FABP4P15090 132 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BOP23527 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 S100PP25815 95 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BBP33778 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BDP58876 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BCP62807 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 NREPQ16612 68 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST2H2BEQ16778 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BHQ93079 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BNQ99877 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 HIST1H2BMQ99879 126 aa0.23□□□□□ -2.37
VBP1-204ENST00000625964 DNAL4O96015 105 aa0.22□□□□□ -2.37
VBP1-204ENST00000625964 TNP1P09430 55 aa0.22□□□□□ -2.37
VBP1-204ENST00000625964 HIGD1BQ9P298 99 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms