RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
CHD2-205ENST00000625662 DNHD1Q96M86 4753 aa5.1□□□□□ -1.59
CHD2-205ENST00000625662 MT1HP80294 61 aa5.1□□□□□ -1.59
CHD2-205ENST00000625662 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
CHD2-205ENST00000625662 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
CHD2-205ENST00000625662 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
CHD2-205ENST00000625662 DNAH2Q9P225 4427 aa5.05□□□□□ -1.6
CHD2-205ENST00000625662 VPS13CQ709C8 3753 aa5.03□□□□□ -1.6
CHD2-205ENST00000625662 DYNC1H1Q14204 4646 aaKnown RBP5.01□□□□□ -1.61
CHD2-205ENST00000625662 AKAP9Q99996 3911 aa4.98□□□□□ -1.61
CHD2-205ENST00000625662 VPS13DQ5THJ4 4388 aa4.97□□□□□ -1.61
CHD2-205ENST00000625662 KRTAP12-3P60328 96 aa4.96□□□□□ -1.61
CHD2-205ENST00000625662 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
CHD2-205ENST00000625662 MT2AP02795 61 aa4.95□□□□□ -1.62
CHD2-205ENST00000625662 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
CHD2-205ENST00000625662 DNAH17Q9UFH2 4485 aa4.91□□□□□ -1.62
CHD2-205ENST00000625662 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
CHD2-205ENST00000625662 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
CHD2-205ENST00000625662 FAT2Q9NYQ8 4349 aa4.85□□□□□ -1.63
CHD2-205ENST00000625662 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
CHD2-205ENST00000625662 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
CHD2-205ENST00000625662 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
CHD2-205ENST00000625662 ANK2Q01484 3957 aa4.81□□□□□ -1.64
CHD2-205ENST00000625662 RYR1P21817 5038 aa4.81□□□□□ -1.64
CHD2-205ENST00000625662 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
CHD2-205ENST00000625662 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
CHD2-205ENST00000625662 MT1FP04733 61 aa4.79□□□□□ -1.64
CHD2-205ENST00000625662 HERC1Q15751 4861 aa4.78□□□□□ -1.64
CHD2-205ENST00000625662 ZNF469Q96JG9 3925 aaPredicted RBP4.77□□□□□ -1.65
CHD2-205ENST00000625662 SACSQ9NZJ4 4579 aa4.74□□□□□ -1.65
CHD2-205ENST00000625662 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
CHD2-205ENST00000625662 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
CHD2-205ENST00000625662 DNAH8Q96JB1 4490 aa4.73□□□□□ -1.65
CHD2-205ENST00000625662 RYR3Q15413 4870 aa4.72□□□□□ -1.65
CHD2-205ENST00000625662 RYR2Q92736 4967 aa4.7□□□□□ -1.66
CHD2-205ENST00000625662 STARD9Q9P2P6 4700 aa4.69□□□□□ -1.66
CHD2-205ENST00000625662 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
CHD2-205ENST00000625662 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
CHD2-205ENST00000625662 DNAH3Q8TD57 4116 aa4.66□□□□□ -1.66
CHD2-205ENST00000625662 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.66
CHD2-205ENST00000625662 FAT1Q14517 4588 aa4.62□□□□□ -1.67
CHD2-205ENST00000625662 CSMD3Q7Z407 3707 aa4.62□□□□□ -1.67
CHD2-205ENST00000625662 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
CHD2-205ENST00000625662 HSPG2P98160 4391 aa4.59□□□□□ -1.67
CHD2-205ENST00000625662 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
CHD2-205ENST00000625662 SPRR2EP22531 72 aa4.56□□□□□ -1.68
CHD2-205ENST00000625662 SPRR2BP35325 72 aa4.56□□□□□ -1.68
CHD2-205ENST00000625662 SPRR2AP35326 72 aa4.56□□□□□ -1.68
CHD2-205ENST00000625662 KIAA1109Q2LD37 5005 aa4.55□□□□□ -1.68
CHD2-205ENST00000625662 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
CHD2-205ENST00000625662 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
CHD2-205ENST00000625662 HERC2O95714 4834 aa4.55□□□□□ -1.68
CHD2-205ENST00000625662 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
CHD2-205ENST00000625662 LRP1Q07954 4544 aaKnown RBP4.49□□□□□ -1.69
CHD2-205ENST00000625662 DNAH7Q8WXX0 4024 aa4.48□□□□□ -1.69
CHD2-205ENST00000625662 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
CHD2-205ENST00000625662 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
CHD2-205ENST00000625662 SPRR2DP22532 72 aa4.45□□□□□ -1.7
CHD2-205ENST00000625662 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
CHD2-205ENST00000625662 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
CHD2-205ENST00000625662 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
CHD2-205ENST00000625662 LCE2CQ5TA81 110 aa4.4□□□□□ -1.71
CHD2-205ENST00000625662 LCE2BO14633 110 aa4.39□□□□□ -1.71
CHD2-205ENST00000625662 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
CHD2-205ENST00000625662 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
CHD2-205ENST00000625662 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
CHD2-205ENST00000625662 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.71
CHD2-205ENST00000625662 MT1BP07438 61 aa4.34□□□□□ -1.71
CHD2-205ENST00000625662 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CHD2-205ENST00000625662 CMYA5Q8N3K9 4069 aa4.32□□□□□ -1.72
CHD2-205ENST00000625662 PKD1P98161 4303 aa4.32□□□□□ -1.72
CHD2-205ENST00000625662 KMT2AQ03164 3969 aa4.31□□□□□ -1.72
CHD2-205ENST00000625662 MT1XP80297 61 aa4.29□□□□□ -1.72
CHD2-205ENST00000625662 FRAS1Q86XX4 4008 aa4.29□□□□□ -1.72
CHD2-205ENST00000625662 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
CHD2-205ENST00000625662 MT3P25713 68 aa4.28□□□□□ -1.72
CHD2-205ENST00000625662 MT1GP13640 62 aa4.27□□□□□ -1.73
CHD2-205ENST00000625662 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
CHD2-205ENST00000625662 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
CHD2-205ENST00000625662 LYSTQ99698 3801 aa4.18□□□□□ -1.74
CHD2-205ENST00000625662 KMT2CQ8NEZ4 4911 aaKnown RBP4.17□□□□□ -1.74
CHD2-205ENST00000625662 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
CHD2-205ENST00000625662 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
CHD2-205ENST00000625662 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
CHD2-205ENST00000625662 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
CHD2-205ENST00000625662 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.76
CHD2-205ENST00000625662 LRP2P98164 4655 aa4.08□□□□□ -1.76
CHD2-205ENST00000625662 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
CHD2-205ENST00000625662 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
CHD2-205ENST00000625662 HYDINQ4G0P3 5121 aa4.04□□□□□ -1.76
CHD2-205ENST00000625662 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
CHD2-205ENST00000625662 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
CHD2-205ENST00000625662 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
CHD2-205ENST00000625662 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
CHD2-205ENST00000625662 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
CHD2-205ENST00000625662 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
CHD2-205ENST00000625662 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
CHD2-205ENST00000625662 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
CHD2-205ENST00000625662 MT1EP04732 61 aa3.94□□□□□ -1.78
CHD2-205ENST00000625662 MT1LQ93083 61 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 275 ms