RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
DDX1-208ENST00000621973 COA5Q86WW8 74 aa3.44□□□□□ -1.86
DDX1-208ENST00000621973 LOC101927531A0A1B0GV80 90 aa3.43□□□□□ -1.86
DDX1-208ENST00000621973 FRAS1Q86XX4 4008 aa3.42□□□□□ -1.86
DDX1-208ENST00000621973 CHKB-CPT1BH3BT56 60 aa3.42□□□□□ -1.86
DDX1-208ENST00000621973 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
DDX1-208ENST00000621973 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
DDX1-208ENST00000621973 DNHD1Q96M86 4753 aa3.41□□□□□ -1.86
DDX1-208ENST00000621973 PKD1P98161 4303 aa3.41□□□□□ -1.86
DDX1-208ENST00000621973 KRTAP21-3Q3LHN1 58 aa3.4□□□□□ -1.87
DDX1-208ENST00000621973 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
DDX1-208ENST00000621973 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
DDX1-208ENST00000621973 DMAC1Q96GE9 116 aa3.39□□□□□ -1.87
DDX1-208ENST00000621973 TGP01266 2768 aa3.39□□□□□ -1.87
DDX1-208ENST00000621973 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
DDX1-208ENST00000621973 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
DDX1-208ENST00000621973 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
DDX1-208ENST00000621973 LRP1BQ9NZR2 4599 aa3.37□□□□□ -1.87
DDX1-208ENST00000621973 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
DDX1-208ENST00000621973 HYDINQ4G0P3 5121 aa3.37□□□□□ -1.87
DDX1-208ENST00000621973 FAT2Q9NYQ8 4349 aa3.36□□□□□ -1.87
DDX1-208ENST00000621973 SPINK1P00995 79 aa3.35□□□□□ -1.87
DDX1-208ENST00000621973 ACYP2P14621 99 aa3.35□□□□□ -1.87
DDX1-208ENST00000621973 SACSQ9NZJ4 4579 aa3.34□□□□□ -1.87
DDX1-208ENST00000621973 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
DDX1-208ENST00000621973 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
DDX1-208ENST00000621973 LINC00304Q8N9R0 145 aa3.31□□□□□ -1.88
DDX1-208ENST00000621973 VPS13BQ7Z7G8 4022 aa3.3□□□□□ -1.88
DDX1-208ENST00000621973 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
DDX1-208ENST00000621973 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
DDX1-208ENST00000621973 SMR3BP02814 79 aaPredicted RBP3.28□□□□□ -1.88
DDX1-208ENST00000621973 KRTAP10-4P60372 401 aaPredicted RBP3.28□□□□□ -1.88
DDX1-208ENST00000621973 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
DDX1-208ENST00000621973 SPINK7P58062 85 aa3.28□□□□□ -1.88
DDX1-208ENST00000621973 APOBP04114 4563 aaKnown RBP3.24□□□□□ -1.89
DDX1-208ENST00000621973 A0A1B0GU69 56 aa3.23□□□□□ -1.89
DDX1-208ENST00000621973 C9orf92A6NGG3 77 aa3.22□□□□□ -1.89
DDX1-208ENST00000621973 PKHD1L1Q86WI1 4243 aa3.22□□□□□ -1.89
DDX1-208ENST00000621973 SPATA8Q6RVD6 105 aa3.2□□□□□ -1.9
DDX1-208ENST00000621973 RYR2Q92736 4967 aa3.19□□□□□ -1.9
DDX1-208ENST00000621973 PKHD1P08F94 4074 aa3.19□□□□□ -1.9
DDX1-208ENST00000621973 UQCR11O14957 56 aa3.18□□□□□ -1.9
DDX1-208ENST00000621973 FAT1Q14517 4588 aa3.17□□□□□ -1.9
DDX1-208ENST00000621973 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
DDX1-208ENST00000621973 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
DDX1-208ENST00000621973 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
DDX1-208ENST00000621973 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
DDX1-208ENST00000621973 INE1O15225 51 aa3.12□□□□□ -1.91
DDX1-208ENST00000621973 Q5VSD8 79 aa3.12□□□□□ -1.91
DDX1-208ENST00000621973 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
DDX1-208ENST00000621973 FLG2Q5D862 2391 aaPredicted RBP3.11□□□□□ -1.91
DDX1-208ENST00000621973 TNXBP22105 4242 aa3.1□□□□□ -1.91
DDX1-208ENST00000621973 RPL37P61927 97 aaKnown RBP3.1□□□□□ -1.91
DDX1-208ENST00000621973 H1FX-AS1Q4G0G2 97 aa3.08□□□□□ -1.92
DDX1-208ENST00000621973 RYR1P21817 5038 aa3.07□□□□□ -1.92
DDX1-208ENST00000621973 KRTAP17-1Q9BYP8 105 aa3.07□□□□□ -1.92
DDX1-208ENST00000621973 KMT2CQ8NEZ4 4911 aaKnown RBP3.07□□□□□ -1.92
DDX1-208ENST00000621973 HSPG2P98160 4391 aa3.07□□□□□ -1.92
DDX1-208ENST00000621973 H0YAA0 97 aa3.07□□□□□ -1.92
DDX1-208ENST00000621973 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
DDX1-208ENST00000621973 MT1HL1P0DM35 61 aa3.05□□□□□ -1.92
DDX1-208ENST00000621973 S4R3F8 94 aa3.01□□□□□ -1.93
DDX1-208ENST00000621973 RYR3Q15413 4870 aa3□□□□□ -1.93
DDX1-208ENST00000621973 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.94
DDX1-208ENST00000621973 KIAA1109Q2LD37 5005 aa2.96□□□□□ -1.94
DDX1-208ENST00000621973 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
DDX1-208ENST00000621973 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
DDX1-208ENST00000621973 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
DDX1-208ENST00000621973 A0A0D9SG42 100 aa2.9□□□□□ -1.94
DDX1-208ENST00000621973 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.94
DDX1-208ENST00000621973 EPPK1P58107 5090 aaKnown RBP2.9□□□□□ -1.95
DDX1-208ENST00000621973 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
DDX1-208ENST00000621973 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
DDX1-208ENST00000621973 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
DDX1-208ENST00000621973 LRP2P98164 4655 aa2.87□□□□□ -1.95
DDX1-208ENST00000621973 M0QZ58 72 aa2.86□□□□□ -1.95
DDX1-208ENST00000621973 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
DDX1-208ENST00000621973 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
DDX1-208ENST00000621973 LPAP08519 4548 aa2.84□□□□□ -1.95
DDX1-208ENST00000621973 CRIPTQ9P021 101 aa2.84□□□□□ -1.96
DDX1-208ENST00000621973 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
DDX1-208ENST00000621973 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
DDX1-208ENST00000621973 PLAC4Q8WY50 150 aa2.83□□□□□ -1.96
DDX1-208ENST00000621973 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
DDX1-208ENST00000621973 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
DDX1-208ENST00000621973 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
DDX1-208ENST00000621973 C10orf95Q9H7T3 257 aa2.76□□□□□ -1.97
DDX1-208ENST00000621973 HERC2O95714 4834 aa2.75□□□□□ -1.97
DDX1-208ENST00000621973 BIRC6Q9NR09 4857 aa2.74□□□□□ -1.97
DDX1-208ENST00000621973 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
DDX1-208ENST00000621973 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
DDX1-208ENST00000621973 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
DDX1-208ENST00000621973 FLGP20930 4061 aaPredicted RBP2.67□□□□□ -1.98
DDX1-208ENST00000621973 HERC1Q15751 4861 aa2.66□□□□□ -1.98
DDX1-208ENST00000621973 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
DDX1-208ENST00000621973 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
DDX1-208ENST00000621973 PCLOQ9Y6V0 5065 aa2.58□□□□□ -2
DDX1-208ENST00000621973 MUC2Q02817 5179 aa2.57□□□□□ -2
DDX1-208ENST00000621973 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
DDX1-208ENST00000621973 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms