RNA–Protein interactions for RNA: ENST00000621551.3

CACNA1E-209, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 14,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-209ENST00000621551 ANK2Q01484 3957 aa3.14□□□□□ -1.91
CACNA1E-209ENST00000621551 DNAH10Q8IVF4 4471 aa3.14□□□□□ -1.91
CACNA1E-209ENST00000621551 HUWE1Q7Z6Z7 4374 aaKnown RBP3.14□□□□□ -1.91
CACNA1E-209ENST00000621551 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
CACNA1E-209ENST00000621551 PLECQ15149 4684 aaKnown RBP3.1□□□□□ -1.91
CACNA1E-209ENST00000621551 CSMD3Q7Z407 3707 aa3.09□□□□□ -1.92
CACNA1E-209ENST00000621551 KMT2AQ03164 3969 aa3.08□□□□□ -1.92
CACNA1E-209ENST00000621551 CSMD2Q7Z408 3487 aa3.05□□□□□ -1.92
CACNA1E-209ENST00000621551 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
CACNA1E-209ENST00000621551 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
CACNA1E-209ENST00000621551 VPS13BQ7Z7G8 4022 aa3.03□□□□□ -1.92
CACNA1E-209ENST00000621551 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.92
CACNA1E-209ENST00000621551 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.92
CACNA1E-209ENST00000621551 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
CACNA1E-209ENST00000621551 DNAH17Q9UFH2 4485 aa3.01□□□□□ -1.93
CACNA1E-209ENST00000621551 DNHD1Q96M86 4753 aa3□□□□□ -1.93
CACNA1E-209ENST00000621551 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
CACNA1E-209ENST00000621551 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
CACNA1E-209ENST00000621551 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
CACNA1E-209ENST00000621551 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
CACNA1E-209ENST00000621551 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
CACNA1E-209ENST00000621551 LCE3AQ5TA76 89 aa2.9□□□□□ -1.94
CACNA1E-209ENST00000621551 FAT1Q14517 4588 aa2.9□□□□□ -1.94
CACNA1E-209ENST00000621551 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
CACNA1E-209ENST00000621551 LORP23490 312 aaPredicted RBP2.87□□□□□ -1.95
CACNA1E-209ENST00000621551 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
CACNA1E-209ENST00000621551 KRTAP10-4P60372 401 aaPredicted RBP2.86□□□□□ -1.95
CACNA1E-209ENST00000621551 DNAH5Q8TE73 4624 aa2.85□□□□□ -1.95
CACNA1E-209ENST00000621551 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
CACNA1E-209ENST00000621551 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.95
CACNA1E-209ENST00000621551 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.96
CACNA1E-209ENST00000621551 DYNC2H1Q8NCM8 4307 aaKnown RBP2.84□□□□□ -1.96
CACNA1E-209ENST00000621551 DYNC1H1Q14204 4646 aaKnown RBP2.83□□□□□ -1.96
CACNA1E-209ENST00000621551 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
CACNA1E-209ENST00000621551 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
CACNA1E-209ENST00000621551 LRP1Q07954 4544 aaKnown RBP2.78□□□□□ -1.96
CACNA1E-209ENST00000621551 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
CACNA1E-209ENST00000621551 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
CACNA1E-209ENST00000621551 PKD1P98161 4303 aa2.7□□□□□ -1.98
CACNA1E-209ENST00000621551 STARD9Q9P2P6 4700 aa2.7□□□□□ -1.98
CACNA1E-209ENST00000621551 RYR1P21817 5038 aa2.69□□□□□ -1.98
CACNA1E-209ENST00000621551 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
CACNA1E-209ENST00000621551 RYR3Q15413 4870 aa2.67□□□□□ -1.98
CACNA1E-209ENST00000621551 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
CACNA1E-209ENST00000621551 RYR2Q92736 4967 aa2.64□□□□□ -1.99
CACNA1E-209ENST00000621551 KRTAP4-5Q9BYR2 181 aa2.64□□□□□ -1.99
CACNA1E-209ENST00000621551 KIAA1109Q2LD37 5005 aa2.63□□□□□ -1.99
CACNA1E-209ENST00000621551 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
CACNA1E-209ENST00000621551 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
CACNA1E-209ENST00000621551 PKHD1L1Q86WI1 4243 aa2.62□□□□□ -1.99
CACNA1E-209ENST00000621551 HYDINQ4G0P3 5121 aa2.6□□□□□ -1.99
CACNA1E-209ENST00000621551 KRTAP4-1Q9BYQ7 146 aa2.6□□□□□ -1.99
CACNA1E-209ENST00000621551 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
CACNA1E-209ENST00000621551 HSPG2P98160 4391 aa2.6□□□□□ -1.99
CACNA1E-209ENST00000621551 TNXBP22105 4242 aa2.59□□□□□ -1.99
CACNA1E-209ENST00000621551 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -2
CACNA1E-209ENST00000621551 HERC2O95714 4834 aa2.55□□□□□ -2
CACNA1E-209ENST00000621551 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
CACNA1E-209ENST00000621551 MT2AP02795 61 aa2.5□□□□□ -2.01
CACNA1E-209ENST00000621551 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
CACNA1E-209ENST00000621551 MT1HP80294 61 aa2.48□□□□□ -2.01
CACNA1E-209ENST00000621551 MT1FP04733 61 aa2.46□□□□□ -2.01
CACNA1E-209ENST00000621551 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
CACNA1E-209ENST00000621551 LRP2P98164 4655 aa2.45□□□□□ -2.02
CACNA1E-209ENST00000621551 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
CACNA1E-209ENST00000621551 MT3P25713 68 aa2.44□□□□□ -2.02
CACNA1E-209ENST00000621551 HERC1Q15751 4861 aa2.42□□□□□ -2.02
CACNA1E-209ENST00000621551 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
CACNA1E-209ENST00000621551 KRTAP19-8Q3LI54 63 aa2.41□□□□□ -2.02
CACNA1E-209ENST00000621551 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.02
CACNA1E-209ENST00000621551 MT1XP80297 61 aa2.4□□□□□ -2.02
CACNA1E-209ENST00000621551 KRTAP19-1Q8IUB9 90 aa2.39□□□□□ -2.03
CACNA1E-209ENST00000621551 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
CACNA1E-209ENST00000621551 UBR4Q5T4S7 5183 aa2.35□□□□□ -2.03
CACNA1E-209ENST00000621551 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
CACNA1E-209ENST00000621551 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
CACNA1E-209ENST00000621551 RNF213Q63HN8 5207 aa2.32□□□□□ -2.04
CACNA1E-209ENST00000621551 EPPK1P58107 5090 aaKnown RBP2.32□□□□□ -2.04
CACNA1E-209ENST00000621551 SPRR2EP22531 72 aa2.31□□□□□ -2.04
CACNA1E-209ENST00000621551 SPRR2BP35325 72 aa2.31□□□□□ -2.04
CACNA1E-209ENST00000621551 SPRR2AP35326 72 aa2.31□□□□□ -2.04
CACNA1E-209ENST00000621551 MT1BP07438 61 aa2.29□□□□□ -2.04
CACNA1E-209ENST00000621551 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
CACNA1E-209ENST00000621551 MT1GP13640 62 aa2.28□□□□□ -2.04
CACNA1E-209ENST00000621551 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CACNA1E-209ENST00000621551 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CACNA1E-209ENST00000621551 LCE2BO14633 110 aa2.26□□□□□ -2.05
CACNA1E-209ENST00000621551 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CACNA1E-209ENST00000621551 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
CACNA1E-209ENST00000621551 KRTAP9-8Q9BYQ0 159 aa2.22□□□□□ -2.05
CACNA1E-209ENST00000621551 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
CACNA1E-209ENST00000621551 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
CACNA1E-209ENST00000621551 KRTAP9-3Q9BYQ3 159 aa2.2□□□□□ -2.06
CACNA1E-209ENST00000621551 KRTAP17-1Q9BYP8 105 aa2.2□□□□□ -2.06
CACNA1E-209ENST00000621551 MT1LQ93083 61 aa2.19□□□□□ -2.06
CACNA1E-209ENST00000621551 MUC2Q02817 5179 aa2.17□□□□□ -2.06
CACNA1E-209ENST00000621551 PRM1P04553 51 aa2.17□□□□□ -2.06
CACNA1E-209ENST00000621551 LCE2CQ5TA81 110 aa2.16□□□□□ -2.06
CACNA1E-209ENST00000621551 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
CACNA1E-209ENST00000621551 KRTAP4-7Q9BYR0 210 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms