RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 LINC00310P59036 64 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 Q6ZQT0 140 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 KRTAP5-2Q701N4 177 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 HIST1H4GQ99525 98 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 HIST1H2BLQ99880 126 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 VAMP8Q9BV40 100 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 UQCR10Q9UDW1 63 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 R4GN34 69 aa0.82□□□□□ -2.28
CPNE3-211ENST00000621526 TSTD3H0UI37 97 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 JMJD7-PLA2G4BH0Y9G9 81 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 NDUFC1O43677 76 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 SMIM6P0DI80 62 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 HSD52Q0P140 79 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 UBE2V1Q13404 147 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 SPATA45Q537H7 98 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 KRTAP5-5Q701N2 237 aaPredicted RBP0.81□□□□□ -2.28
CPNE3-211ENST00000621526 ADM2Q7Z4H4 148 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 CEND1Q8N111 149 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 NAA38Q9BRA0 125 aaKnown RBP0.81□□□□□ -2.28
CPNE3-211ENST00000621526 TTTY13Q9BZ97 58 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 PRO1854Q9UHT4 67 aa0.81□□□□□ -2.28
CPNE3-211ENST00000621526 LOC100996750A0A140TA64 210 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 HCG22E2RYF7 251 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 NDUFS5O43920 106 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 SCGB1C2P0DMR2 95 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 CXCL6P80162 114 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 MT1LQ93083 61 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 KRTAP4-3Q9BYR4 195 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 ORMDL1Q9P0S3 153 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 PAM16Q9Y3D7 125 aa0.8□□□□□ -2.28
CPNE3-211ENST00000621526 MMP24-AS1A0A0U1RRL7 71 aa0.79□□□□□ -2.28
CPNE3-211ENST00000621526 PSMB2P49721 201 aa0.79□□□□□ -2.28
CPNE3-211ENST00000621526 ATXN8Q156A1 80 aa0.79□□□□□ -2.28
CPNE3-211ENST00000621526 C20orf197Q8N268 126 aa0.79□□□□□ -2.28
CPNE3-211ENST00000621526 A0A087WVE0 104 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 C9JAW5 83 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 H3BT86 120 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 M0QZ58 72 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 PYY3Q5JQD4 70 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 GTF2H5Q6ZYL4 71 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 ATOH7Q8N100 152 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 C14orf144Q96I85 54 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 KRTAP9-4Q9BYQ2 154 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 KRTAP4-4Q9BYR3 166 aa0.78□□□□□ -2.28
CPNE3-211ENST00000621526 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 C9orf118A6NHY6 69 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 ACYP1P07311 99 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 BAALC-AS2P0C853 105 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 NREPQ16612 68 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 COL5A1-AS1Q5SY13 56 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 VPS25Q9BRG1 176 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 KRTAP4-2Q9BYR5 136 aa0.77□□□□□ -2.29
CPNE3-211ENST00000621526 F8W1H4 67 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 J3QR89 54 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 TRIAP1O43715 76 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 P0C880 135 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 FXYD2P54710 66 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 LINC01554Q52M75 96 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 UBL5Q9BZL1 73 aa0.76□□□□□ -2.29
CPNE3-211ENST00000621526 A0A0D9SG42 100 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 FAM240AA0A1B0GVK7 77 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 A0A1W2PPM0 123 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 ATP5EP2Q5VTU8 51 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 CASC2Q6XLA1 102 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 TP53AIP1Q9HCN2 124 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 TMA7Q9Y2S6 64 aaKnown RBP0.75□□□□□ -2.29
CPNE3-211ENST00000621526 SPCS1Q9Y6A9 102 aa0.75□□□□□ -2.29
CPNE3-211ENST00000621526 A0A1B0GV72 72 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 K7EP34 96 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 K7ERJ3 54 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 ATOX1O00244 68 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 BPY2O14599 106 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 KRTAP3-2Q9BYR7 98 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 CYP4F30PQ9H0H9 118 aa0.74□□□□□ -2.29
CPNE3-211ENST00000621526 LOC105371267A0A1B0GV96 52 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 H3BPC8 53 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 TAX1BP3O14907 124 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 BATFQ16520 125 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 LINC00643Q86TS7 51 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 SMIM20Q8N5G0 67 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 C14orf132Q9NPU4 83 aa0.73□□□□□ -2.29
CPNE3-211ENST00000621526 LOC101927531A0A1B0GV80 90 aa0.72□□□□□ -2.29
CPNE3-211ENST00000621526 UQCRQO14949 82 aa0.72□□□□□ -2.29
CPNE3-211ENST00000621526 MT-ATP8P03928 68 aa0.72□□□□□ -2.29
CPNE3-211ENST00000621526 KRTAP19-4Q3LI73 84 aa0.72□□□□□ -2.29
CPNE3-211ENST00000621526 K7ERU9 68 aa0.71□□□□□ -2.3
CPNE3-211ENST00000621526 MP68P56378 58 aa0.71□□□□□ -2.3
CPNE3-211ENST00000621526 LCE3AQ5TA76 89 aa0.71□□□□□ -2.3
CPNE3-211ENST00000621526 CAMK2N1Q7Z7J9 78 aa0.71□□□□□ -2.3
CPNE3-211ENST00000621526 PRO0461Q9UI25 63 aa0.71□□□□□ -2.3
CPNE3-211ENST00000621526 TRAV22A0A0B4J277 110 aa0.7□□□□□ -2.3
CPNE3-211ENST00000621526 SCGB1A1P11684 91 aa0.7□□□□□ -2.3
CPNE3-211ENST00000621526 ETDBQ3ZM63 59 aa0.7□□□□□ -2.3
CPNE3-211ENST00000621526 SPTSSBQ8NFR3 76 aa0.7□□□□□ -2.3
CPNE3-211ENST00000621526 C10orf95Q9H7T3 257 aa0.7□□□□□ -2.3
CPNE3-211ENST00000621526 PCP4L1A6NKN8 68 aa0.69□□□□□ -2.3
CPNE3-211ENST00000621526 MT1AP04731 61 aa0.69□□□□□ -2.3
CPNE3-211ENST00000621526 HIST1H4AP62805 103 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms