RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 KRTAP12-1P59990 96 aa6.07□□□□□ -1.44
SPCS1-206ENST00000619898 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
SPCS1-206ENST00000619898 KMT2AQ03164 3969 aa6.06□□□□□ -1.44
SPCS1-206ENST00000619898 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
SPCS1-206ENST00000619898 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
SPCS1-206ENST00000619898 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
SPCS1-206ENST00000619898 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
SPCS1-206ENST00000619898 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.45
SPCS1-206ENST00000619898 FRAS1Q86XX4 4008 aa6.02□□□□□ -1.45
SPCS1-206ENST00000619898 DNAH7Q8WXX0 4024 aa6.01□□□□□ -1.45
SPCS1-206ENST00000619898 ALMS1Q8TCU4 4167 aa5.96□□□□□ -1.45
SPCS1-206ENST00000619898 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
SPCS1-206ENST00000619898 DNHD1Q96M86 4753 aa5.93□□□□□ -1.46
SPCS1-206ENST00000619898 FAT1Q14517 4588 aa5.92□□□□□ -1.46
SPCS1-206ENST00000619898 HECTD4Q9Y4D8 3996 aa5.92□□□□□ -1.46
SPCS1-206ENST00000619898 DYNC2H1Q8NCM8 4307 aaKnown RBP5.9□□□□□ -1.47
SPCS1-206ENST00000619898 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
SPCS1-206ENST00000619898 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
SPCS1-206ENST00000619898 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
SPCS1-206ENST00000619898 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
SPCS1-206ENST00000619898 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
SPCS1-206ENST00000619898 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
SPCS1-206ENST00000619898 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
SPCS1-206ENST00000619898 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
SPCS1-206ENST00000619898 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
SPCS1-206ENST00000619898 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
SPCS1-206ENST00000619898 FAT2Q9NYQ8 4349 aa5.67□□□□□ -1.5
SPCS1-206ENST00000619898 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
SPCS1-206ENST00000619898 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
SPCS1-206ENST00000619898 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
SPCS1-206ENST00000619898 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
SPCS1-206ENST00000619898 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
SPCS1-206ENST00000619898 RYR1P21817 5038 aa5.49□□□□□ -1.53
SPCS1-206ENST00000619898 PKD1P98161 4303 aa5.49□□□□□ -1.53
SPCS1-206ENST00000619898 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
SPCS1-206ENST00000619898 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
SPCS1-206ENST00000619898 KRTAP17-1Q9BYP8 105 aa5.42□□□□□ -1.54
SPCS1-206ENST00000619898 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
SPCS1-206ENST00000619898 RYR3Q15413 4870 aa5.36□□□□□ -1.55
SPCS1-206ENST00000619898 LRP2P98164 4655 aa5.35□□□□□ -1.55
SPCS1-206ENST00000619898 RYR2Q92736 4967 aa5.32□□□□□ -1.56
SPCS1-206ENST00000619898 HSPG2P98160 4391 aa5.29□□□□□ -1.56
SPCS1-206ENST00000619898 PKHD1L1Q86WI1 4243 aa5.25□□□□□ -1.57
SPCS1-206ENST00000619898 KMT2CQ8NEZ4 4911 aaKnown RBP5.23□□□□□ -1.57
SPCS1-206ENST00000619898 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
SPCS1-206ENST00000619898 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
SPCS1-206ENST00000619898 TNXBP22105 4242 aa5.15□□□□□ -1.58
SPCS1-206ENST00000619898 LPAP08519 4548 aa5.12□□□□□ -1.59
SPCS1-206ENST00000619898 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
SPCS1-206ENST00000619898 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
SPCS1-206ENST00000619898 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
SPCS1-206ENST00000619898 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
SPCS1-206ENST00000619898 HERC2O95714 4834 aa4.99□□□□□ -1.61
SPCS1-206ENST00000619898 MT1HP80294 61 aa4.96□□□□□ -1.62
SPCS1-206ENST00000619898 INE1O15225 51 aa4.95□□□□□ -1.62
SPCS1-206ENST00000619898 MT2AP02795 61 aa4.95□□□□□ -1.62
SPCS1-206ENST00000619898 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
SPCS1-206ENST00000619898 MT1FP04733 61 aa4.92□□□□□ -1.62
SPCS1-206ENST00000619898 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
SPCS1-206ENST00000619898 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
SPCS1-206ENST00000619898 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
SPCS1-206ENST00000619898 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
SPCS1-206ENST00000619898 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
SPCS1-206ENST00000619898 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
SPCS1-206ENST00000619898 LCE2CQ5TA81 110 aa4.79□□□□□ -1.64
SPCS1-206ENST00000619898 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
SPCS1-206ENST00000619898 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
SPCS1-206ENST00000619898 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
SPCS1-206ENST00000619898 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
SPCS1-206ENST00000619898 HERC1Q15751 4861 aa4.69□□□□□ -1.66
SPCS1-206ENST00000619898 MT1XP80297 61 aa4.69□□□□□ -1.66
SPCS1-206ENST00000619898 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
SPCS1-206ENST00000619898 MUC2Q02817 5179 aa4.68□□□□□ -1.66
SPCS1-206ENST00000619898 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
SPCS1-206ENST00000619898 MT1BP07438 61 aa4.67□□□□□ -1.66
SPCS1-206ENST00000619898 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
SPCS1-206ENST00000619898 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SPCS1-206ENST00000619898 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
SPCS1-206ENST00000619898 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
SPCS1-206ENST00000619898 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
SPCS1-206ENST00000619898 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
SPCS1-206ENST00000619898 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
SPCS1-206ENST00000619898 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
SPCS1-206ENST00000619898 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
SPCS1-206ENST00000619898 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
SPCS1-206ENST00000619898 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
SPCS1-206ENST00000619898 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
SPCS1-206ENST00000619898 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
SPCS1-206ENST00000619898 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
SPCS1-206ENST00000619898 LCE2BO14633 110 aa4.32□□□□□ -1.72
SPCS1-206ENST00000619898 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
SPCS1-206ENST00000619898 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
SPCS1-206ENST00000619898 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
SPCS1-206ENST00000619898 SPRR2EP22531 72 aa4.15□□□□□ -1.75
SPCS1-206ENST00000619898 SPRR2BP35325 72 aa4.15□□□□□ -1.75
SPCS1-206ENST00000619898 SPRR2AP35326 72 aa4.15□□□□□ -1.75
SPCS1-206ENST00000619898 MT1LQ93083 61 aa4.14□□□□□ -1.75
SPCS1-206ENST00000619898 MT1GP13640 62 aa4.12□□□□□ -1.75
SPCS1-206ENST00000619898 MT1EP04732 61 aa4.1□□□□□ -1.75
SPCS1-206ENST00000619898 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms