RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.63
PCDHA4-204ENST00000618834 DNAH3Q8TD57 4116 aa4.83□□□□□ -1.64
PCDHA4-204ENST00000618834 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
PCDHA4-204ENST00000618834 HECTD4Q9Y4D8 3996 aa4.75□□□□□ -1.65
PCDHA4-204ENST00000618834 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.65
PCDHA4-204ENST00000618834 ANK2Q01484 3957 aa4.7□□□□□ -1.66
PCDHA4-204ENST00000618834 ZNF469Q96JG9 3925 aaPredicted RBP4.69□□□□□ -1.66
PCDHA4-204ENST00000618834 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
PCDHA4-204ENST00000618834 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
PCDHA4-204ENST00000618834 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
PCDHA4-204ENST00000618834 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
PCDHA4-204ENST00000618834 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
PCDHA4-204ENST00000618834 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
PCDHA4-204ENST00000618834 KMT2AQ03164 3969 aa4.5□□□□□ -1.69
PCDHA4-204ENST00000618834 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
PCDHA4-204ENST00000618834 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
PCDHA4-204ENST00000618834 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
PCDHA4-204ENST00000618834 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
PCDHA4-204ENST00000618834 ANK3Q12955 4377 aaKnown RBP4.43□□□□□ -1.7
PCDHA4-204ENST00000618834 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
PCDHA4-204ENST00000618834 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
PCDHA4-204ENST00000618834 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
PCDHA4-204ENST00000618834 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
PCDHA4-204ENST00000618834 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
PCDHA4-204ENST00000618834 MT1HP80294 61 aa4.25□□□□□ -1.73
PCDHA4-204ENST00000618834 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
PCDHA4-204ENST00000618834 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
PCDHA4-204ENST00000618834 MT2AP02795 61 aa4.21□□□□□ -1.74
PCDHA4-204ENST00000618834 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
PCDHA4-204ENST00000618834 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
PCDHA4-204ENST00000618834 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
PCDHA4-204ENST00000618834 MT1FP04733 61 aa4.12□□□□□ -1.75
PCDHA4-204ENST00000618834 DNAH10Q8IVF4 4471 aa4.08□□□□□ -1.76
PCDHA4-204ENST00000618834 FAT2Q9NYQ8 4349 aa4.05□□□□□ -1.76
PCDHA4-204ENST00000618834 VPS13DQ5THJ4 4388 aa4.05□□□□□ -1.76
PCDHA4-204ENST00000618834 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
PCDHA4-204ENST00000618834 SPRR2EP22531 72 aa4.01□□□□□ -1.77
PCDHA4-204ENST00000618834 SPRR2BP35325 72 aa4.01□□□□□ -1.77
PCDHA4-204ENST00000618834 SPRR2AP35326 72 aa4.01□□□□□ -1.77
PCDHA4-204ENST00000618834 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
PCDHA4-204ENST00000618834 MT1GP13640 62 aa3.98□□□□□ -1.77
PCDHA4-204ENST00000618834 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.78
PCDHA4-204ENST00000618834 DYNC2H1Q8NCM8 4307 aaKnown RBP3.95□□□□□ -1.78
PCDHA4-204ENST00000618834 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
PCDHA4-204ENST00000618834 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
PCDHA4-204ENST00000618834 MT1XP80297 61 aa3.91□□□□□ -1.78
PCDHA4-204ENST00000618834 LCE2BO14633 110 aa3.9□□□□□ -1.79
PCDHA4-204ENST00000618834 SPRR2DP22532 72 aa3.9□□□□□ -1.79
PCDHA4-204ENST00000618834 DNAH8Q96JB1 4490 aa3.9□□□□□ -1.79
PCDHA4-204ENST00000618834 DNAH9Q9NYC9 4486 aa3.89□□□□□ -1.79
PCDHA4-204ENST00000618834 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
PCDHA4-204ENST00000618834 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
PCDHA4-204ENST00000618834 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
PCDHA4-204ENST00000618834 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
PCDHA4-204ENST00000618834 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
PCDHA4-204ENST00000618834 STARD9Q9P2P6 4700 aa3.78□□□□□ -1.81
PCDHA4-204ENST00000618834 DNHD1Q96M86 4753 aa3.76□□□□□ -1.81
PCDHA4-204ENST00000618834 PRM1P04553 51 aa3.71□□□□□ -1.82
PCDHA4-204ENST00000618834 DNAH5Q8TE73 4624 aa3.7□□□□□ -1.82
PCDHA4-204ENST00000618834 MT1BP07438 61 aa3.66□□□□□ -1.82
PCDHA4-204ENST00000618834 PLECQ15149 4684 aaKnown RBP3.64□□□□□ -1.83
PCDHA4-204ENST00000618834 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
PCDHA4-204ENST00000618834 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
PCDHA4-204ENST00000618834 PKD1P98161 4303 aa3.64□□□□□ -1.83
PCDHA4-204ENST00000618834 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
PCDHA4-204ENST00000618834 MT1LQ93083 61 aa3.63□□□□□ -1.83
PCDHA4-204ENST00000618834 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
PCDHA4-204ENST00000618834 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
PCDHA4-204ENST00000618834 MT3P25713 68 aa3.58□□□□□ -1.84
PCDHA4-204ENST00000618834 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
PCDHA4-204ENST00000618834 TNXBP22105 4242 aa3.55□□□□□ -1.84
PCDHA4-204ENST00000618834 HSPG2P98160 4391 aa3.55□□□□□ -1.84
PCDHA4-204ENST00000618834 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
PCDHA4-204ENST00000618834 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
PCDHA4-204ENST00000618834 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
PCDHA4-204ENST00000618834 MT1EP04732 61 aa3.53□□□□□ -1.85
PCDHA4-204ENST00000618834 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
PCDHA4-204ENST00000618834 FAT1Q14517 4588 aa3.48□□□□□ -1.85
PCDHA4-204ENST00000618834 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
PCDHA4-204ENST00000618834 MT4P47944 62 aa3.47□□□□□ -1.85
PCDHA4-204ENST00000618834 MT1MQ8N339 61 aa3.45□□□□□ -1.86
PCDHA4-204ENST00000618834 SACSQ9NZJ4 4579 aa3.45□□□□□ -1.86
PCDHA4-204ENST00000618834 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
PCDHA4-204ENST00000618834 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
PCDHA4-204ENST00000618834 RYR3Q15413 4870 aa3.43□□□□□ -1.86
PCDHA4-204ENST00000618834 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
PCDHA4-204ENST00000618834 HYDINQ4G0P3 5121 aa3.31□□□□□ -1.88
PCDHA4-204ENST00000618834 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
PCDHA4-204ENST00000618834 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
PCDHA4-204ENST00000618834 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
PCDHA4-204ENST00000618834 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
PCDHA4-204ENST00000618834 EPPK1P58107 5090 aaKnown RBP3.28□□□□□ -1.88
PCDHA4-204ENST00000618834 KRTAP17-1Q9BYP8 105 aa3.27□□□□□ -1.89
PCDHA4-204ENST00000618834 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
PCDHA4-204ENST00000618834 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
PCDHA4-204ENST00000618834 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
PCDHA4-204ENST00000618834 MT1AP04731 61 aa3.22□□□□□ -1.89
PCDHA4-204ENST00000618834 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
PCDHA4-204ENST00000618834 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
PCDHA4-204ENST00000618834 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms