RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
CNTNAP3B-214ENST00000618777 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
CNTNAP3B-214ENST00000618777 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
CNTNAP3B-214ENST00000618777 DNAH10Q8IVF4 4471 aa6.51□□□□□ -1.37
CNTNAP3B-214ENST00000618777 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
CNTNAP3B-214ENST00000618777 KRTAP8-1Q8IUC2 63 aa6.41□□□□□ -1.38
CNTNAP3B-214ENST00000618777 ANK2Q01484 3957 aa6.36□□□□□ -1.39
CNTNAP3B-214ENST00000618777 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
CNTNAP3B-214ENST00000618777 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
CNTNAP3B-214ENST00000618777 LYSTQ99698 3801 aa6.28□□□□□ -1.4
CNTNAP3B-214ENST00000618777 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
CNTNAP3B-214ENST00000618777 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
CNTNAP3B-214ENST00000618777 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
CNTNAP3B-214ENST00000618777 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
CNTNAP3B-214ENST00000618777 DNAH9Q9NYC9 4486 aa6.22□□□□□ -1.41
CNTNAP3B-214ENST00000618777 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
CNTNAP3B-214ENST00000618777 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
CNTNAP3B-214ENST00000618777 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
CNTNAP3B-214ENST00000618777 DNAH11Q96DT5 4516 aa6.13□□□□□ -1.43
CNTNAP3B-214ENST00000618777 FRAS1Q86XX4 4008 aa6.11□□□□□ -1.43
CNTNAP3B-214ENST00000618777 STARD9Q9P2P6 4700 aa6.1□□□□□ -1.43
CNTNAP3B-214ENST00000618777 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
CNTNAP3B-214ENST00000618777 KMT2AQ03164 3969 aa6.06□□□□□ -1.44
CNTNAP3B-214ENST00000618777 DNAH7Q8WXX0 4024 aa6.04□□□□□ -1.44
CNTNAP3B-214ENST00000618777 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
CNTNAP3B-214ENST00000618777 MT2AP02795 61 aa6.03□□□□□ -1.44
CNTNAP3B-214ENST00000618777 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
CNTNAP3B-214ENST00000618777 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
CNTNAP3B-214ENST00000618777 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
CNTNAP3B-214ENST00000618777 FAT1Q14517 4588 aa5.98□□□□□ -1.45
CNTNAP3B-214ENST00000618777 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
CNTNAP3B-214ENST00000618777 PRKDCP78527 4128 aaKnown RBP5.97□□□□□ -1.45
CNTNAP3B-214ENST00000618777 LRP1BQ9NZR2 4599 aa5.97□□□□□ -1.45
CNTNAP3B-214ENST00000618777 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.46
CNTNAP3B-214ENST00000618777 MT1HP80294 61 aa5.96□□□□□ -1.46
CNTNAP3B-214ENST00000618777 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
CNTNAP3B-214ENST00000618777 DNAH2Q9P225 4427 aa5.92□□□□□ -1.46
CNTNAP3B-214ENST00000618777 DNAH3Q8TD57 4116 aa5.9□□□□□ -1.46
CNTNAP3B-214ENST00000618777 DNHD1Q96M86 4753 aa5.9□□□□□ -1.47
CNTNAP3B-214ENST00000618777 DNAH6Q9C0G6 4158 aa5.89□□□□□ -1.47
CNTNAP3B-214ENST00000618777 MT1FP04733 61 aa5.86□□□□□ -1.47
CNTNAP3B-214ENST00000618777 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
CNTNAP3B-214ENST00000618777 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
CNTNAP3B-214ENST00000618777 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
CNTNAP3B-214ENST00000618777 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
CNTNAP3B-214ENST00000618777 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
CNTNAP3B-214ENST00000618777 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
CNTNAP3B-214ENST00000618777 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
CNTNAP3B-214ENST00000618777 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
CNTNAP3B-214ENST00000618777 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
CNTNAP3B-214ENST00000618777 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
CNTNAP3B-214ENST00000618777 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
CNTNAP3B-214ENST00000618777 LCE3EQ5T5B0 92 aa5.61□□□□□ -1.51
CNTNAP3B-214ENST00000618777 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
CNTNAP3B-214ENST00000618777 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
CNTNAP3B-214ENST00000618777 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
CNTNAP3B-214ENST00000618777 MT1GP13640 62 aa5.57□□□□□ -1.52
CNTNAP3B-214ENST00000618777 MT1XP80297 61 aa5.56□□□□□ -1.52
CNTNAP3B-214ENST00000618777 APOBP04114 4563 aaKnown RBP5.53□□□□□ -1.52
CNTNAP3B-214ENST00000618777 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
CNTNAP3B-214ENST00000618777 FAT2Q9NYQ8 4349 aa5.49□□□□□ -1.53
CNTNAP3B-214ENST00000618777 RYR1P21817 5038 aa5.45□□□□□ -1.54
CNTNAP3B-214ENST00000618777 MT1BP07438 61 aa5.39□□□□□ -1.55
CNTNAP3B-214ENST00000618777 KIAA1109Q2LD37 5005 aa5.39□□□□□ -1.55
CNTNAP3B-214ENST00000618777 PKD1P98161 4303 aa5.36□□□□□ -1.55
CNTNAP3B-214ENST00000618777 PRM1P04553 51 aa5.33□□□□□ -1.56
CNTNAP3B-214ENST00000618777 LRP2P98164 4655 aa5.32□□□□□ -1.56
CNTNAP3B-214ENST00000618777 SPRR2EP22531 72 aa5.31□□□□□ -1.56
CNTNAP3B-214ENST00000618777 SPRR2BP35325 72 aa5.31□□□□□ -1.56
CNTNAP3B-214ENST00000618777 SPRR2AP35326 72 aa5.31□□□□□ -1.56
CNTNAP3B-214ENST00000618777 KRTAP17-1Q9BYP8 105 aa5.3□□□□□ -1.56
CNTNAP3B-214ENST00000618777 RYR3Q15413 4870 aa5.29□□□□□ -1.56
CNTNAP3B-214ENST00000618777 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
CNTNAP3B-214ENST00000618777 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
CNTNAP3B-214ENST00000618777 HSPG2P98160 4391 aa5.27□□□□□ -1.57
CNTNAP3B-214ENST00000618777 MT1LQ93083 61 aa5.24□□□□□ -1.57
CNTNAP3B-214ENST00000618777 KMT2CQ8NEZ4 4911 aaKnown RBP5.24□□□□□ -1.57
CNTNAP3B-214ENST00000618777 LCE2BO14633 110 aa5.21□□□□□ -1.57
CNTNAP3B-214ENST00000618777 LPAP08519 4548 aa5.19□□□□□ -1.58
CNTNAP3B-214ENST00000618777 RYR2Q92736 4967 aa5.18□□□□□ -1.58
CNTNAP3B-214ENST00000618777 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.58
CNTNAP3B-214ENST00000618777 SPRR2DP22532 72 aa5.14□□□□□ -1.59
CNTNAP3B-214ENST00000618777 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
CNTNAP3B-214ENST00000618777 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
CNTNAP3B-214ENST00000618777 MT3P25713 68 aa5.13□□□□□ -1.59
CNTNAP3B-214ENST00000618777 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
CNTNAP3B-214ENST00000618777 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CNTNAP3B-214ENST00000618777 TNXBP22105 4242 aa5.05□□□□□ -1.6
CNTNAP3B-214ENST00000618777 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
CNTNAP3B-214ENST00000618777 MT1EP04732 61 aa5.03□□□□□ -1.6
CNTNAP3B-214ENST00000618777 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
CNTNAP3B-214ENST00000618777 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
CNTNAP3B-214ENST00000618777 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
CNTNAP3B-214ENST00000618777 HERC1Q15751 4861 aa4.93□□□□□ -1.62
CNTNAP3B-214ENST00000618777 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
CNTNAP3B-214ENST00000618777 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
CNTNAP3B-214ENST00000618777 HERC2O95714 4834 aa4.9□□□□□ -1.62
CNTNAP3B-214ENST00000618777 MT1MQ8N339 61 aa4.88□□□□□ -1.63
CNTNAP3B-214ENST00000618777 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
CNTNAP3B-214ENST00000618777 MUC2Q02817 5179 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms