RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 DNAH17Q9UFH2 4485 aa9.79□□□□□ -0.84
PCSK6-217ENST00000618548 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.84
PCSK6-217ENST00000618548 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.85
PCSK6-217ENST00000618548 LRP1BQ9NZR2 4599 aa9.74□□□□□ -0.85
PCSK6-217ENST00000618548 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
PCSK6-217ENST00000618548 FRAS1Q86XX4 4008 aa9.71□□□□□ -0.86
PCSK6-217ENST00000618548 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
PCSK6-217ENST00000618548 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
PCSK6-217ENST00000618548 KMT2AQ03164 3969 aa9.63□□□□□ -0.87
PCSK6-217ENST00000618548 DNAH3Q8TD57 4116 aa9.61□□□□□ -0.87
PCSK6-217ENST00000618548 FAT1Q14517 4588 aa9.55□□□□□ -0.88
PCSK6-217ENST00000618548 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
PCSK6-217ENST00000618548 CMYA5Q8N3K9 4069 aa9.45□□□□□ -0.9
PCSK6-217ENST00000618548 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
PCSK6-217ENST00000618548 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
PCSK6-217ENST00000618548 VPS13BQ7Z7G8 4022 aa9.4□□□□□ -0.9
PCSK6-217ENST00000618548 HECTD4Q9Y4D8 3996 aa9.4□□□□□ -0.91
PCSK6-217ENST00000618548 DNHD1Q96M86 4753 aa9.38□□□□□ -0.91
PCSK6-217ENST00000618548 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
PCSK6-217ENST00000618548 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
PCSK6-217ENST00000618548 DYNC1H1Q14204 4646 aaKnown RBP9.31□□□□□ -0.92
PCSK6-217ENST00000618548 MYCBP2O75592 4640 aa9.31□□□□□ -0.92
PCSK6-217ENST00000618548 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
PCSK6-217ENST00000618548 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.94
PCSK6-217ENST00000618548 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
PCSK6-217ENST00000618548 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
PCSK6-217ENST00000618548 LRP1Q07954 4544 aaKnown RBP8.98□□□□□ -0.97
PCSK6-217ENST00000618548 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
PCSK6-217ENST00000618548 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
PCSK6-217ENST00000618548 HYDINQ4G0P3 5121 aa8.86□□□□□ -0.99
PCSK6-217ENST00000618548 FAT3Q8TDW7 4589 aa8.85□□□□□ -0.99
PCSK6-217ENST00000618548 RYR1P21817 5038 aa8.82□□□□□ -1
PCSK6-217ENST00000618548 PKHD1P08F94 4074 aa8.8□□□□□ -1
PCSK6-217ENST00000618548 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1
PCSK6-217ENST00000618548 KRTAP23-1A1A580 65 aa8.73□□□□□ -1.01
PCSK6-217ENST00000618548 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.01
PCSK6-217ENST00000618548 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
PCSK6-217ENST00000618548 LCE3AQ5TA76 89 aa8.68□□□□□ -1.02
PCSK6-217ENST00000618548 LRP2P98164 4655 aa8.67□□□□□ -1.02
PCSK6-217ENST00000618548 INE1O15225 51 aa8.65□□□□□ -1.02
PCSK6-217ENST00000618548 PKD1P98161 4303 aa8.57□□□□□ -1.04
PCSK6-217ENST00000618548 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
PCSK6-217ENST00000618548 HSPG2P98160 4391 aa8.5□□□□□ -1.05
PCSK6-217ENST00000618548 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
PCSK6-217ENST00000618548 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
PCSK6-217ENST00000618548 RYR3Q15413 4870 aa8.47□□□□□ -1.05
PCSK6-217ENST00000618548 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
PCSK6-217ENST00000618548 RYR2Q92736 4967 aa8.24□□□□□ -1.09
PCSK6-217ENST00000618548 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
PCSK6-217ENST00000618548 LPAP08519 4548 aa8.22□□□□□ -1.09
PCSK6-217ENST00000618548 SPRR2GQ9BYE4 73 aa8.2□□□□□ -1.1
PCSK6-217ENST00000618548 SPRR5A0A1B0GTR4 108 aa8.1□□□□□ -1.11
PCSK6-217ENST00000618548 TNXBP22105 4242 aa8.1□□□□□ -1.11
PCSK6-217ENST00000618548 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
PCSK6-217ENST00000618548 MT2AP02795 61 aa8.02□□□□□ -1.13
PCSK6-217ENST00000618548 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
PCSK6-217ENST00000618548 MT1FP04733 61 aa7.98□□□□□ -1.13
PCSK6-217ENST00000618548 MT1HP80294 61 aa7.98□□□□□ -1.13
PCSK6-217ENST00000618548 HERC2O95714 4834 aa7.92□□□□□ -1.14
PCSK6-217ENST00000618548 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
PCSK6-217ENST00000618548 BIRC6Q9NR09 4857 aa7.8□□□□□ -1.16
PCSK6-217ENST00000618548 CRCT1Q9UGL9 99 aa7.78□□□□□ -1.16
PCSK6-217ENST00000618548 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
PCSK6-217ENST00000618548 KRTAP19-5Q3LI72 72 aa7.72□□□□□ -1.17
PCSK6-217ENST00000618548 KRTAP10-7P60409 375 aaPredicted RBP7.71□□□□□ -1.18
PCSK6-217ENST00000618548 LCE3CQ5T5A8 94 aa7.67□□□□□ -1.18
PCSK6-217ENST00000618548 EPPK1P58107 5090 aaKnown RBP7.65□□□□□ -1.18
PCSK6-217ENST00000618548 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.18
PCSK6-217ENST00000618548 MT1XP80297 61 aa7.65□□□□□ -1.18
PCSK6-217ENST00000618548 KRTAP19-8Q3LI54 63 aa7.64□□□□□ -1.19
PCSK6-217ENST00000618548 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
PCSK6-217ENST00000618548 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
PCSK6-217ENST00000618548 FLGP20930 4061 aaPredicted RBP7.59□□□□□ -1.19
PCSK6-217ENST00000618548 MT1BP07438 61 aa7.56□□□□□ -1.2
PCSK6-217ENST00000618548 MUC2Q02817 5179 aa7.56□□□□□ -1.2
PCSK6-217ENST00000618548 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
PCSK6-217ENST00000618548 HERC1Q15751 4861 aa7.39□□□□□ -1.23
PCSK6-217ENST00000618548 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
PCSK6-217ENST00000618548 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
PCSK6-217ENST00000618548 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
PCSK6-217ENST00000618548 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
PCSK6-217ENST00000618548 HMCN2Q8NDA2 5059 aa7.24□□□□□ -1.25
PCSK6-217ENST00000618548 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.26
PCSK6-217ENST00000618548 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
PCSK6-217ENST00000618548 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
PCSK6-217ENST00000618548 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
PCSK6-217ENST00000618548 SYNE1Q8NF91 8797 aaKnown RBP7.1□□□□□ -1.27
PCSK6-217ENST00000618548 KRTAP12-4P60329 112 aa6.98□□□□□ -1.29
PCSK6-217ENST00000618548 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
PCSK6-217ENST00000618548 LCE2BO14633 110 aa6.92□□□□□ -1.3
PCSK6-217ENST00000618548 MT1GP13640 62 aa6.9□□□□□ -1.31
PCSK6-217ENST00000618548 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
PCSK6-217ENST00000618548 MT1LQ93083 61 aa6.79□□□□□ -1.32
PCSK6-217ENST00000618548 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
PCSK6-217ENST00000618548 OBSCNQ5VST9 7968 aa6.75□□□□□ -1.33
PCSK6-217ENST00000618548 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
PCSK6-217ENST00000618548 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
PCSK6-217ENST00000618548 MT1EP04732 61 aa6.69□□□□□ -1.34
PCSK6-217ENST00000618548 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
PCSK6-217ENST00000618548 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms