RNA–Protein interactions for RNA: ENST00000618278.4

SLC6A6-207, Transcript of solute carrier family 6 member 6, humanhuman

TSL 5

Gene SLC6A6, Length 6,401 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-207ENST00000618278 ANK2Q01484 3957 aa4.64□□□□□ -1.67
SLC6A6-207ENST00000618278 ZNF469Q96JG9 3925 aaPredicted RBP4.64□□□□□ -1.67
SLC6A6-207ENST00000618278 FBN3Q75N90 2809 aa4.6□□□□□ -1.67
SLC6A6-207ENST00000618278 CMYA5Q8N3K9 4069 aa4.57□□□□□ -1.68
SLC6A6-207ENST00000618278 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
SLC6A6-207ENST00000618278 TRRAPQ9Y4A5 3859 aa4.53□□□□□ -1.68
SLC6A6-207ENST00000618278 COL7A1Q02388 2944 aa4.53□□□□□ -1.68
SLC6A6-207ENST00000618278 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
SLC6A6-207ENST00000618278 SPRR2DP22532 72 aa4.49□□□□□ -1.69
SLC6A6-207ENST00000618278 DNAH3Q8TD57 4116 aa4.48□□□□□ -1.69
SLC6A6-207ENST00000618278 ALMS1Q8TCU4 4167 aa4.47□□□□□ -1.69
SLC6A6-207ENST00000618278 DNAH10Q8IVF4 4471 aa4.46□□□□□ -1.69
SLC6A6-207ENST00000618278 FRAS1Q86XX4 4008 aa4.46□□□□□ -1.7
SLC6A6-207ENST00000618278 CSMD3Q7Z407 3707 aa4.44□□□□□ -1.7
SLC6A6-207ENST00000618278 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
SLC6A6-207ENST00000618278 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
SLC6A6-207ENST00000618278 MT1HP80294 61 aa4.43□□□□□ -1.7
SLC6A6-207ENST00000618278 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
SLC6A6-207ENST00000618278 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
SLC6A6-207ENST00000618278 LYSTQ99698 3801 aa4.38□□□□□ -1.71
SLC6A6-207ENST00000618278 KRTAP19-5Q3LI72 72 aa4.33□□□□□ -1.72
SLC6A6-207ENST00000618278 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
SLC6A6-207ENST00000618278 LCE2BO14633 110 aa4.31□□□□□ -1.72
SLC6A6-207ENST00000618278 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
SLC6A6-207ENST00000618278 MEGF8Q7Z7M0 2845 aa4.3□□□□□ -1.72
SLC6A6-207ENST00000618278 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
SLC6A6-207ENST00000618278 MT2AP02795 61 aa4.25□□□□□ -1.73
SLC6A6-207ENST00000618278 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
SLC6A6-207ENST00000618278 DNAH7Q8WXX0 4024 aa4.24□□□□□ -1.73
SLC6A6-207ENST00000618278 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
SLC6A6-207ENST00000618278 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
SLC6A6-207ENST00000618278 DNAH2Q9P225 4427 aa4.19□□□□□ -1.74
SLC6A6-207ENST00000618278 PRKDCP78527 4128 aaKnown RBP4.19□□□□□ -1.74
SLC6A6-207ENST00000618278 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
SLC6A6-207ENST00000618278 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
SLC6A6-207ENST00000618278 PLECQ15149 4684 aaKnown RBP4.17□□□□□ -1.74
SLC6A6-207ENST00000618278 HECTD4Q9Y4D8 3996 aa4.16□□□□□ -1.74
SLC6A6-207ENST00000618278 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
SLC6A6-207ENST00000618278 MT1FP04733 61 aa4.16□□□□□ -1.74
SLC6A6-207ENST00000618278 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
SLC6A6-207ENST00000618278 DNAH11Q96DT5 4516 aa4.15□□□□□ -1.74
SLC6A6-207ENST00000618278 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
SLC6A6-207ENST00000618278 LCE2DQ5TA82 110 aaPredicted RBP4.14□□□□□ -1.75
SLC6A6-207ENST00000618278 DNAH17Q9UFH2 4485 aa4.14□□□□□ -1.75
SLC6A6-207ENST00000618278 MT1GP13640 62 aa4.11□□□□□ -1.75
SLC6A6-207ENST00000618278 DNAH6Q9C0G6 4158 aa4.1□□□□□ -1.75
SLC6A6-207ENST00000618278 MT4P47944 62 aa4.09□□□□□ -1.75
SLC6A6-207ENST00000618278 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
SLC6A6-207ENST00000618278 VPS13BQ7Z7G8 4022 aa4.04□□□□□ -1.76
SLC6A6-207ENST00000618278 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
SLC6A6-207ENST00000618278 DNAH5Q8TE73 4624 aa3.98□□□□□ -1.77
SLC6A6-207ENST00000618278 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
SLC6A6-207ENST00000618278 FAT2Q9NYQ8 4349 aa3.92□□□□□ -1.78
SLC6A6-207ENST00000618278 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SLC6A6-207ENST00000618278 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SLC6A6-207ENST00000618278 SACSQ9NZJ4 4579 aa3.85□□□□□ -1.79
SLC6A6-207ENST00000618278 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
SLC6A6-207ENST00000618278 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
SLC6A6-207ENST00000618278 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
SLC6A6-207ENST00000618278 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
SLC6A6-207ENST00000618278 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
SLC6A6-207ENST00000618278 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
SLC6A6-207ENST00000618278 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
SLC6A6-207ENST00000618278 PKD1P98161 4303 aa3.79□□□□□ -1.8
SLC6A6-207ENST00000618278 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
SLC6A6-207ENST00000618278 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
SLC6A6-207ENST00000618278 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
SLC6A6-207ENST00000618278 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
SLC6A6-207ENST00000618278 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
SLC6A6-207ENST00000618278 PKHD1P08F94 4074 aa3.72□□□□□ -1.81
SLC6A6-207ENST00000618278 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
SLC6A6-207ENST00000618278 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
SLC6A6-207ENST00000618278 TNXBP22105 4242 aa3.69□□□□□ -1.82
SLC6A6-207ENST00000618278 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
SLC6A6-207ENST00000618278 FAT1Q14517 4588 aa3.66□□□□□ -1.82
SLC6A6-207ENST00000618278 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
SLC6A6-207ENST00000618278 HYDINQ4G0P3 5121 aa3.64□□□□□ -1.83
SLC6A6-207ENST00000618278 MT1XP80297 61 aa3.64□□□□□ -1.83
SLC6A6-207ENST00000618278 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SLC6A6-207ENST00000618278 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SLC6A6-207ENST00000618278 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
SLC6A6-207ENST00000618278 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
SLC6A6-207ENST00000618278 RYR1P21817 5038 aa3.62□□□□□ -1.83
SLC6A6-207ENST00000618278 HSPG2P98160 4391 aa3.61□□□□□ -1.83
SLC6A6-207ENST00000618278 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
SLC6A6-207ENST00000618278 MT3P25713 68 aa3.57□□□□□ -1.84
SLC6A6-207ENST00000618278 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
SLC6A6-207ENST00000618278 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
SLC6A6-207ENST00000618278 LPAP08519 4548 aa3.55□□□□□ -1.84
SLC6A6-207ENST00000618278 KRTAP4-7Q9BYR0 210 aa3.55□□□□□ -1.84
SLC6A6-207ENST00000618278 MT1BP07438 61 aa3.52□□□□□ -1.85
SLC6A6-207ENST00000618278 PRM1P04553 51 aa3.49□□□□□ -1.85
SLC6A6-207ENST00000618278 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
SLC6A6-207ENST00000618278 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
SLC6A6-207ENST00000618278 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
SLC6A6-207ENST00000618278 KRTAP9-3Q9BYQ3 159 aa3.45□□□□□ -1.86
SLC6A6-207ENST00000618278 RYR3Q15413 4870 aa3.45□□□□□ -1.86
SLC6A6-207ENST00000618278 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
SLC6A6-207ENST00000618278 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
SLC6A6-207ENST00000618278 MYCBP2O75592 4640 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms