RNA–Protein interactions for RNA: ENST00000616058.4

SUCO-210, Transcript of SUN domain containing ossification factor, humanhuman

TSL 1 (best) BASIC

Gene SUCO, Length 5,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-210ENST00000616058 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
SUCO-210ENST00000616058 DNHD1Q96M86 4753 aa7.14□□□□□ -1.27
SUCO-210ENST00000616058 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
SUCO-210ENST00000616058 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
SUCO-210ENST00000616058 STARD9Q9P2P6 4700 aa7.02□□□□□ -1.29
SUCO-210ENST00000616058 DNAH17Q9UFH2 4485 aa6.98□□□□□ -1.29
SUCO-210ENST00000616058 FAT1Q14517 4588 aa6.92□□□□□ -1.3
SUCO-210ENST00000616058 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
SUCO-210ENST00000616058 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
SUCO-210ENST00000616058 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
SUCO-210ENST00000616058 DNAH2Q9P225 4427 aa6.83□□□□□ -1.32
SUCO-210ENST00000616058 DNAH8Q96JB1 4490 aa6.83□□□□□ -1.32
SUCO-210ENST00000616058 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
SUCO-210ENST00000616058 KMT2AQ03164 3969 aa6.79□□□□□ -1.32
SUCO-210ENST00000616058 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
SUCO-210ENST00000616058 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
SUCO-210ENST00000616058 ANK2Q01484 3957 aa6.73□□□□□ -1.33
SUCO-210ENST00000616058 RYR1P21817 5038 aa6.69□□□□□ -1.34
SUCO-210ENST00000616058 DYNC2H1Q8NCM8 4307 aaKnown RBP6.66□□□□□ -1.34
SUCO-210ENST00000616058 LYSTQ99698 3801 aa6.66□□□□□ -1.34
SUCO-210ENST00000616058 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.34
SUCO-210ENST00000616058 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
SUCO-210ENST00000616058 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
SUCO-210ENST00000616058 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
SUCO-210ENST00000616058 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
SUCO-210ENST00000616058 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
SUCO-210ENST00000616058 FRAS1Q86XX4 4008 aa6.55□□□□□ -1.36
SUCO-210ENST00000616058 KIAA1109Q2LD37 5005 aa6.53□□□□□ -1.36
SUCO-210ENST00000616058 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
SUCO-210ENST00000616058 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
SUCO-210ENST00000616058 DNAH6Q9C0G6 4158 aa6.49□□□□□ -1.37
SUCO-210ENST00000616058 DNAH7Q8WXX0 4024 aa6.46□□□□□ -1.38
SUCO-210ENST00000616058 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
SUCO-210ENST00000616058 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
SUCO-210ENST00000616058 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
SUCO-210ENST00000616058 HECTD4Q9Y4D8 3996 aa6.42□□□□□ -1.38
SUCO-210ENST00000616058 RYR3Q15413 4870 aa6.41□□□□□ -1.38
SUCO-210ENST00000616058 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
SUCO-210ENST00000616058 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
SUCO-210ENST00000616058 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
SUCO-210ENST00000616058 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
SUCO-210ENST00000616058 MT1HP80294 61 aa6.28□□□□□ -1.4
SUCO-210ENST00000616058 MT2AP02795 61 aa6.22□□□□□ -1.41
SUCO-210ENST00000616058 RYR2Q92736 4967 aa6.22□□□□□ -1.41
SUCO-210ENST00000616058 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
SUCO-210ENST00000616058 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
SUCO-210ENST00000616058 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
SUCO-210ENST00000616058 MT1FP04733 61 aa6.15□□□□□ -1.43
SUCO-210ENST00000616058 LRP2P98164 4655 aa6.12□□□□□ -1.43
SUCO-210ENST00000616058 INE1O15225 51 aa6.1□□□□□ -1.43
SUCO-210ENST00000616058 HERC2O95714 4834 aa6.05□□□□□ -1.44
SUCO-210ENST00000616058 HSPG2P98160 4391 aa6.03□□□□□ -1.44
SUCO-210ENST00000616058 PKD1P98161 4303 aa5.99□□□□□ -1.45
SUCO-210ENST00000616058 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
SUCO-210ENST00000616058 KMT2CQ8NEZ4 4911 aaKnown RBP5.95□□□□□ -1.46
SUCO-210ENST00000616058 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
SUCO-210ENST00000616058 LPAP08519 4548 aa5.9□□□□□ -1.47
SUCO-210ENST00000616058 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
SUCO-210ENST00000616058 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
SUCO-210ENST00000616058 BIRC6Q9NR09 4857 aa5.78□□□□□ -1.48
SUCO-210ENST00000616058 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
SUCO-210ENST00000616058 LCE2CQ5TA81 110 aa5.76□□□□□ -1.49
SUCO-210ENST00000616058 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
SUCO-210ENST00000616058 TNXBP22105 4242 aa5.73□□□□□ -1.49
SUCO-210ENST00000616058 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
SUCO-210ENST00000616058 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
SUCO-210ENST00000616058 HERC1Q15751 4861 aa5.71□□□□□ -1.49
SUCO-210ENST00000616058 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
SUCO-210ENST00000616058 MT1XP80297 61 aa5.7□□□□□ -1.5
SUCO-210ENST00000616058 MT1BP07438 61 aa5.69□□□□□ -1.5
SUCO-210ENST00000616058 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
SUCO-210ENST00000616058 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
SUCO-210ENST00000616058 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
SUCO-210ENST00000616058 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
SUCO-210ENST00000616058 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
SUCO-210ENST00000616058 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
SUCO-210ENST00000616058 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
SUCO-210ENST00000616058 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
SUCO-210ENST00000616058 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
SUCO-210ENST00000616058 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
SUCO-210ENST00000616058 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
SUCO-210ENST00000616058 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
SUCO-210ENST00000616058 LCE2BO14633 110 aa5.34□□□□□ -1.55
SUCO-210ENST00000616058 SPRR2EP22531 72 aa5.3□□□□□ -1.56
SUCO-210ENST00000616058 SPRR2BP35325 72 aa5.3□□□□□ -1.56
SUCO-210ENST00000616058 SPRR2AP35326 72 aa5.3□□□□□ -1.56
SUCO-210ENST00000616058 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
SUCO-210ENST00000616058 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
SUCO-210ENST00000616058 RNF213Q63HN8 5207 aa5.28□□□□□ -1.56
SUCO-210ENST00000616058 MT1GP13640 62 aa5.26□□□□□ -1.57
SUCO-210ENST00000616058 MUC2Q02817 5179 aa5.24□□□□□ -1.57
SUCO-210ENST00000616058 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.57
SUCO-210ENST00000616058 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
SUCO-210ENST00000616058 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
SUCO-210ENST00000616058 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
SUCO-210ENST00000616058 SPRR2DP22532 72 aa5.15□□□□□ -1.59
SUCO-210ENST00000616058 MT1LQ93083 61 aa5.09□□□□□ -1.59
SUCO-210ENST00000616058 MT1EP04732 61 aa5.07□□□□□ -1.6
SUCO-210ENST00000616058 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
SUCO-210ENST00000616058 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms