RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
LINC02538-201ENST00000609107 DNAH5Q8TE73 4624 aa6.77□□□□□ -1.33
LINC02538-201ENST00000609107 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
LINC02538-201ENST00000609107 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.34
LINC02538-201ENST00000609107 DNAH3Q8TD57 4116 aa6.7□□□□□ -1.34
LINC02538-201ENST00000609107 DNAH2Q9P225 4427 aa6.64□□□□□ -1.35
LINC02538-201ENST00000609107 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
LINC02538-201ENST00000609107 ANK2Q01484 3957 aa6.62□□□□□ -1.35
LINC02538-201ENST00000609107 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
LINC02538-201ENST00000609107 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
LINC02538-201ENST00000609107 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
LINC02538-201ENST00000609107 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
LINC02538-201ENST00000609107 DYNC2H1Q8NCM8 4307 aaKnown RBP6.54□□□□□ -1.36
LINC02538-201ENST00000609107 LRP1BQ9NZR2 4599 aa6.54□□□□□ -1.36
LINC02538-201ENST00000609107 PRKDCP78527 4128 aaKnown RBP6.53□□□□□ -1.36
LINC02538-201ENST00000609107 CMYA5Q8N3K9 4069 aa6.52□□□□□ -1.37
LINC02538-201ENST00000609107 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
LINC02538-201ENST00000609107 FAT1Q14517 4588 aa6.45□□□□□ -1.38
LINC02538-201ENST00000609107 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
LINC02538-201ENST00000609107 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
LINC02538-201ENST00000609107 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
LINC02538-201ENST00000609107 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
LINC02538-201ENST00000609107 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
LINC02538-201ENST00000609107 HECTD4Q9Y4D8 3996 aa6.29□□□□□ -1.4
LINC02538-201ENST00000609107 DNAH7Q8WXX0 4024 aa6.26□□□□□ -1.41
LINC02538-201ENST00000609107 LYSTQ99698 3801 aa6.24□□□□□ -1.41
LINC02538-201ENST00000609107 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
LINC02538-201ENST00000609107 KRTAP4-1Q9BYQ7 146 aa6.21□□□□□ -1.42
LINC02538-201ENST00000609107 FRAS1Q86XX4 4008 aa6.21□□□□□ -1.42
LINC02538-201ENST00000609107 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
LINC02538-201ENST00000609107 RYR1P21817 5038 aa6.17□□□□□ -1.42
LINC02538-201ENST00000609107 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
LINC02538-201ENST00000609107 KIAA1109Q2LD37 5005 aa6.06□□□□□ -1.44
LINC02538-201ENST00000609107 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
LINC02538-201ENST00000609107 INE1O15225 51 aa6.04□□□□□ -1.44
LINC02538-201ENST00000609107 HYDINQ4G0P3 5121 aa6.03□□□□□ -1.44
LINC02538-201ENST00000609107 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
LINC02538-201ENST00000609107 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
LINC02538-201ENST00000609107 RYR2Q92736 4967 aa6.02□□□□□ -1.45
LINC02538-201ENST00000609107 RYR3Q15413 4870 aa6□□□□□ -1.45
LINC02538-201ENST00000609107 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
LINC02538-201ENST00000609107 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
LINC02538-201ENST00000609107 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
LINC02538-201ENST00000609107 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
LINC02538-201ENST00000609107 PKD1P98161 4303 aa5.9□□□□□ -1.46
LINC02538-201ENST00000609107 MT1HP80294 61 aa5.9□□□□□ -1.47
LINC02538-201ENST00000609107 PKHD1P08F94 4074 aa5.87□□□□□ -1.47
LINC02538-201ENST00000609107 MT2AP02795 61 aa5.84□□□□□ -1.47
LINC02538-201ENST00000609107 HSPG2P98160 4391 aa5.8□□□□□ -1.48
LINC02538-201ENST00000609107 MT1FP04733 61 aa5.75□□□□□ -1.49
LINC02538-201ENST00000609107 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
LINC02538-201ENST00000609107 LRP2P98164 4655 aa5.71□□□□□ -1.5
LINC02538-201ENST00000609107 HERC2O95714 4834 aa5.65□□□□□ -1.51
LINC02538-201ENST00000609107 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
LINC02538-201ENST00000609107 TNXBP22105 4242 aa5.62□□□□□ -1.51
LINC02538-201ENST00000609107 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
LINC02538-201ENST00000609107 KMT2CQ8NEZ4 4911 aaKnown RBP5.59□□□□□ -1.51
LINC02538-201ENST00000609107 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
LINC02538-201ENST00000609107 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
LINC02538-201ENST00000609107 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
LINC02538-201ENST00000609107 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
LINC02538-201ENST00000609107 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
LINC02538-201ENST00000609107 LPAP08519 4548 aa5.47□□□□□ -1.53
LINC02538-201ENST00000609107 HERC1Q15751 4861 aa5.44□□□□□ -1.54
LINC02538-201ENST00000609107 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
LINC02538-201ENST00000609107 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
LINC02538-201ENST00000609107 MT1BP07438 61 aa5.4□□□□□ -1.55
LINC02538-201ENST00000609107 MT1XP80297 61 aa5.4□□□□□ -1.55
LINC02538-201ENST00000609107 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
LINC02538-201ENST00000609107 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
LINC02538-201ENST00000609107 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
LINC02538-201ENST00000609107 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
LINC02538-201ENST00000609107 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
LINC02538-201ENST00000609107 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
LINC02538-201ENST00000609107 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
LINC02538-201ENST00000609107 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
LINC02538-201ENST00000609107 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
LINC02538-201ENST00000609107 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
LINC02538-201ENST00000609107 PCLOQ9Y6V0 5065 aa5.26□□□□□ -1.57
LINC02538-201ENST00000609107 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
LINC02538-201ENST00000609107 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
LINC02538-201ENST00000609107 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
LINC02538-201ENST00000609107 LCE2BO14633 110 aa5.01□□□□□ -1.61
LINC02538-201ENST00000609107 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
LINC02538-201ENST00000609107 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
LINC02538-201ENST00000609107 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
LINC02538-201ENST00000609107 MT1GP13640 62 aa4.84□□□□□ -1.63
LINC02538-201ENST00000609107 MT1LQ93083 61 aa4.82□□□□□ -1.64
LINC02538-201ENST00000609107 MT1EP04732 61 aa4.8□□□□□ -1.64
LINC02538-201ENST00000609107 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
LINC02538-201ENST00000609107 UBR4Q5T4S7 5183 aa4.75□□□□□ -1.65
LINC02538-201ENST00000609107 MUC2Q02817 5179 aa4.75□□□□□ -1.65
LINC02538-201ENST00000609107 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
LINC02538-201ENST00000609107 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
LINC02538-201ENST00000609107 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.65
LINC02538-201ENST00000609107 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
LINC02538-201ENST00000609107 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
LINC02538-201ENST00000609107 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.66
LINC02538-201ENST00000609107 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.66
LINC02538-201ENST00000609107 SPRR2EP22531 72 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms