RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 DNAH1Q9P2D7 4330 aa1.9□□□□□ -2.11
SGMS1-206ENST00000602565 H3BSH0 61 aa1.9□□□□□ -2.11
SGMS1-206ENST00000602565 POLR2KP53803 58 aaKnown RBP1.9□□□□□ -2.11
SGMS1-206ENST00000602565 TENM3Q9P273 2699 aa1.89□□□□□ -2.11
SGMS1-206ENST00000602565 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
SGMS1-206ENST00000602565 Q8IZM0 81 aa1.88□□□□□ -2.11
SGMS1-206ENST00000602565 COL7A1Q02388 2944 aa1.87□□□□□ -2.11
SGMS1-206ENST00000602565 DNAH3Q8TD57 4116 aa1.86□□□□□ -2.11
SGMS1-206ENST00000602565 CSMD3Q7Z407 3707 aa1.86□□□□□ -2.11
SGMS1-206ENST00000602565 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
SGMS1-206ENST00000602565 HERC1Q15751 4861 aa1.86□□□□□ -2.11
SGMS1-206ENST00000602565 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
SGMS1-206ENST00000602565 RPS27P42677 84 aaKnown RBP1.86□□□□□ -2.11
SGMS1-206ENST00000602565 CDKN2A-AS1Q9UH64 79 aa1.86□□□□□ -2.11
SGMS1-206ENST00000602565 CCL22O00626 93 aa1.85□□□□□ -2.11
SGMS1-206ENST00000602565 DNAH7Q8WXX0 4024 aa1.84□□□□□ -2.11
SGMS1-206ENST00000602565 LYNX1G3V0Z9 82 aa1.84□□□□□ -2.12
SGMS1-206ENST00000602565 PRCDQ00LT1 54 aa1.84□□□□□ -2.12
SGMS1-206ENST00000602565 PIGYQ3MUY2 71 aa1.84□□□□□ -2.12
SGMS1-206ENST00000602565 PLECQ15149 4684 aaKnown RBP1.84□□□□□ -2.12
SGMS1-206ENST00000602565 PLCE1Q9P212 2302 aa1.84□□□□□ -2.12
SGMS1-206ENST00000602565 FRAS1Q86XX4 4008 aa1.83□□□□□ -2.12
SGMS1-206ENST00000602565 RPL39P62891 51 aaKnown RBP1.83□□□□□ -2.12
SGMS1-206ENST00000602565 DEFB108BQ8NET1 73 aa1.82□□□□□ -2.12
SGMS1-206ENST00000602565 RPL39LQ96EH5 51 aaKnown RBP1.82□□□□□ -2.12
SGMS1-206ENST00000602565 TP53AIP1Q9HCN2 124 aa1.81□□□□□ -2.12
SGMS1-206ENST00000602565 I3L2K1 104 aa1.8□□□□□ -2.12
SGMS1-206ENST00000602565 IGLV5-48A0A075B6I7 105 aa1.79□□□□□ -2.12
SGMS1-206ENST00000602565 STAB2Q8WWQ8 2551 aa1.79□□□□□ -2.12
SGMS1-206ENST00000602565 K7EQZ3 153 aa1.78□□□□□ -2.12
SGMS1-206ENST00000602565 ALMS1Q8TCU4 4167 aa1.78□□□□□ -2.12
SGMS1-206ENST00000602565 WNK2Q9Y3S1 2297 aa1.77□□□□□ -2.13
SGMS1-206ENST00000602565 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
SGMS1-206ENST00000602565 KMT2AQ03164 3969 aa1.76□□□□□ -2.13
SGMS1-206ENST00000602565 M0QY20 66 aa1.76□□□□□ -2.13
SGMS1-206ENST00000602565 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
SGMS1-206ENST00000602565 DNAH10Q8IVF4 4471 aa1.75□□□□□ -2.13
SGMS1-206ENST00000602565 LEAP2Q969E1 77 aa1.75□□□□□ -2.13
SGMS1-206ENST00000602565 HMCN2Q8NDA2 5059 aa1.74□□□□□ -2.13
SGMS1-206ENST00000602565 DYNC1H1Q14204 4646 aaKnown RBP1.74□□□□□ -2.13
SGMS1-206ENST00000602565 MINOS1Q5TGZ0 78 aa1.74□□□□□ -2.13
SGMS1-206ENST00000602565 C6orf48Q9UBA6 75 aa1.74□□□□□ -2.13
SGMS1-206ENST00000602565 H3BUX3 64 aa1.73□□□□□ -2.13
SGMS1-206ENST00000602565 TMEM167AQ8TBQ9 72 aa1.73□□□□□ -2.13
SGMS1-206ENST00000602565 DNAH11Q96DT5 4516 aa1.73□□□□□ -2.13
SGMS1-206ENST00000602565 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
SGMS1-206ENST00000602565 H0YAA0 97 aa1.72□□□□□ -2.13
SGMS1-206ENST00000602565 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
SGMS1-206ENST00000602565 PRO0255Q9UI72 69 aa1.72□□□□□ -2.13
SGMS1-206ENST00000602565 MYCBP2O75592 4640 aa1.72□□□□□ -2.13
SGMS1-206ENST00000602565 HSPG2P98160 4391 aa1.72□□□□□ -2.13
SGMS1-206ENST00000602565 WT1-ASQ06250 92 aa1.71□□□□□ -2.14
SGMS1-206ENST00000602565 WFDC13Q8IUB5 93 aa1.71□□□□□ -2.14
SGMS1-206ENST00000602565 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
SGMS1-206ENST00000602565 PKHD1P08F94 4074 aa1.7□□□□□ -2.14
SGMS1-206ENST00000602565 MRPL34Q9BQ48 92 aaKnown RBP1.7□□□□□ -2.14
SGMS1-206ENST00000602565 MUC2Q02817 5179 aa1.7□□□□□ -2.14
SGMS1-206ENST00000602565 K7EIM0 57 aa1.69□□□□□ -2.14
SGMS1-206ENST00000602565 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
SGMS1-206ENST00000602565 WFDC10BQ8IUB3 73 aa1.69□□□□□ -2.14
SGMS1-206ENST00000602565 APOBP04114 4563 aaKnown RBP1.69□□□□□ -2.14
SGMS1-206ENST00000602565 DEFB131AP59861 70 aa1.68□□□□□ -2.14
SGMS1-206ENST00000602565 DNAH5Q8TE73 4624 aa1.68□□□□□ -2.14
SGMS1-206ENST00000602565 DNAH2Q9P225 4427 aa1.68□□□□□ -2.14
SGMS1-206ENST00000602565 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
SGMS1-206ENST00000602565 RPL39P5Q59GN2 51 aa1.67□□□□□ -2.14
SGMS1-206ENST00000602565 FAT2Q9NYQ8 4349 aa1.67□□□□□ -2.14
SGMS1-206ENST00000602565 DNAH17Q9UFH2 4485 aa1.67□□□□□ -2.14
SGMS1-206ENST00000602565 FAT4Q6V0I7 4981 aa1.67□□□□□ -2.14
SGMS1-206ENST00000602565 LRP1BQ9NZR2 4599 aa1.67□□□□□ -2.14
SGMS1-206ENST00000602565 MMP24-AS1A0A0U1RRL7 71 aa1.66□□□□□ -2.14
SGMS1-206ENST00000602565 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
SGMS1-206ENST00000602565 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
SGMS1-206ENST00000602565 DEFB136Q30KP8 78 aa1.66□□□□□ -2.14
SGMS1-206ENST00000602565 Q5VSD8 79 aa1.66□□□□□ -2.14
SGMS1-206ENST00000602565 PKD1P98161 4303 aa1.65□□□□□ -2.15
SGMS1-206ENST00000602565 H1FX-AS1Q4G0G2 97 aa1.65□□□□□ -2.15
SGMS1-206ENST00000602565 KAAG1Q9UBP8 84 aa1.65□□□□□ -2.15
SGMS1-206ENST00000602565 FAT1Q14517 4588 aa1.63□□□□□ -2.15
SGMS1-206ENST00000602565 DEFB130BP0DP73 79 aa1.63□□□□□ -2.15
SGMS1-206ENST00000602565 DEFB130AP0DP74 79 aa1.63□□□□□ -2.15
SGMS1-206ENST00000602565 KLK9Q2XQG4 91 aa1.63□□□□□ -2.15
SGMS1-206ENST00000602565 APLNQ9ULZ1 77 aa1.63□□□□□ -2.15
SGMS1-206ENST00000602565 LRP2P98164 4655 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 VPS13BQ7Z7G8 4022 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 A8MTW9 85 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 CLPSL2Q6UWE3 100 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 SPINK6Q6UWN8 80 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 DEFB104AQ8WTQ1 72 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 TOMM7Q9P0U1 55 aa1.62□□□□□ -2.15
SGMS1-206ENST00000602565 LELP1Q5T871 98 aa1.6□□□□□ -2.15
SGMS1-206ENST00000602565 SRRM2Q9UQ35 2752 aaKnown RBP1.58□□□□□ -2.16
SGMS1-206ENST00000602565 SMR3BP02814 79 aaPredicted RBP1.58□□□□□ -2.16
SGMS1-206ENST00000602565 DEFB135Q30KP9 77 aa1.58□□□□□ -2.16
SGMS1-206ENST00000602565 H3BUA1 57 aa1.57□□□□□ -2.16
SGMS1-206ENST00000602565 FAT3Q8TDW7 4589 aa1.56□□□□□ -2.16
SGMS1-206ENST00000602565 LRP1Q07954 4544 aaKnown RBP1.56□□□□□ -2.16
SGMS1-206ENST00000602565 SPRR1AP35321 89 aa1.55□□□□□ -2.16
SGMS1-206ENST00000602565 DEFB4AO15263 64 aa1.54□□□□□ -2.16
SGMS1-206ENST00000602565 PKHD1L1Q86WI1 4243 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms