RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
ZNF558-207ENST00000601372 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
ZNF558-207ENST00000601372 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
ZNF558-207ENST00000601372 STARD9Q9P2P6 4700 aa5.35□□□□□ -1.55
ZNF558-207ENST00000601372 DNAH2Q9P225 4427 aa5.34□□□□□ -1.55
ZNF558-207ENST00000601372 DNAH7Q8WXX0 4024 aa5.34□□□□□ -1.55
ZNF558-207ENST00000601372 DNAH17Q9UFH2 4485 aa5.33□□□□□ -1.56
ZNF558-207ENST00000601372 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
ZNF558-207ENST00000601372 DNAH8Q96JB1 4490 aa5.31□□□□□ -1.56
ZNF558-207ENST00000601372 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
ZNF558-207ENST00000601372 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
ZNF558-207ENST00000601372 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
ZNF558-207ENST00000601372 DYNC2H1Q8NCM8 4307 aaKnown RBP5.25□□□□□ -1.57
ZNF558-207ENST00000601372 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
ZNF558-207ENST00000601372 HECTD4Q9Y4D8 3996 aa5.23□□□□□ -1.57
ZNF558-207ENST00000601372 FAT2Q9NYQ8 4349 aa5.23□□□□□ -1.57
ZNF558-207ENST00000601372 KRTAP3-3Q9BYR6 98 aa5.23□□□□□ -1.57
ZNF558-207ENST00000601372 DNAH6Q9C0G6 4158 aa5.21□□□□□ -1.57
ZNF558-207ENST00000601372 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
ZNF558-207ENST00000601372 VPS13BQ7Z7G8 4022 aa5.18□□□□□ -1.58
ZNF558-207ENST00000601372 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
ZNF558-207ENST00000601372 LRP1BQ9NZR2 4599 aa5.12□□□□□ -1.59
ZNF558-207ENST00000601372 DYNC1H1Q14204 4646 aaKnown RBP5.03□□□□□ -1.6
ZNF558-207ENST00000601372 SACSQ9NZJ4 4579 aa5.01□□□□□ -1.61
ZNF558-207ENST00000601372 FAT1Q14517 4588 aa4.97□□□□□ -1.61
ZNF558-207ENST00000601372 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
ZNF558-207ENST00000601372 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
ZNF558-207ENST00000601372 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
ZNF558-207ENST00000601372 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
ZNF558-207ENST00000601372 MT1HP80294 61 aa4.88□□□□□ -1.63
ZNF558-207ENST00000601372 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
ZNF558-207ENST00000601372 HSPG2P98160 4391 aa4.83□□□□□ -1.64
ZNF558-207ENST00000601372 PKD1P98161 4303 aa4.82□□□□□ -1.64
ZNF558-207ENST00000601372 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
ZNF558-207ENST00000601372 PKHD1P08F94 4074 aa4.8□□□□□ -1.64
ZNF558-207ENST00000601372 RYR1P21817 5038 aa4.77□□□□□ -1.65
ZNF558-207ENST00000601372 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
ZNF558-207ENST00000601372 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
ZNF558-207ENST00000601372 RYR3Q15413 4870 aa4.7□□□□□ -1.66
ZNF558-207ENST00000601372 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
ZNF558-207ENST00000601372 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
ZNF558-207ENST00000601372 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
ZNF558-207ENST00000601372 MT2AP02795 61 aa4.67□□□□□ -1.66
ZNF558-207ENST00000601372 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
ZNF558-207ENST00000601372 RYR2Q92736 4967 aa4.66□□□□□ -1.66
ZNF558-207ENST00000601372 TNXBP22105 4242 aa4.65□□□□□ -1.67
ZNF558-207ENST00000601372 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
ZNF558-207ENST00000601372 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
ZNF558-207ENST00000601372 MT1FP04733 61 aa4.6□□□□□ -1.67
ZNF558-207ENST00000601372 LPAP08519 4548 aa4.6□□□□□ -1.67
ZNF558-207ENST00000601372 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
ZNF558-207ENST00000601372 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
ZNF558-207ENST00000601372 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
ZNF558-207ENST00000601372 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
ZNF558-207ENST00000601372 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
ZNF558-207ENST00000601372 KMT2CQ8NEZ4 4911 aaKnown RBP4.47□□□□□ -1.69
ZNF558-207ENST00000601372 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
ZNF558-207ENST00000601372 HERC2O95714 4834 aa4.42□□□□□ -1.7
ZNF558-207ENST00000601372 LRP2P98164 4655 aa4.38□□□□□ -1.71
ZNF558-207ENST00000601372 INE1O15225 51 aa4.37□□□□□ -1.71
ZNF558-207ENST00000601372 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
ZNF558-207ENST00000601372 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
ZNF558-207ENST00000601372 EPPK1P58107 5090 aaKnown RBP4.27□□□□□ -1.73
ZNF558-207ENST00000601372 SPRR2EP22531 72 aa4.26□□□□□ -1.73
ZNF558-207ENST00000601372 SPRR2BP35325 72 aa4.26□□□□□ -1.73
ZNF558-207ENST00000601372 SPRR2AP35326 72 aa4.26□□□□□ -1.73
ZNF558-207ENST00000601372 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
ZNF558-207ENST00000601372 KRTAP19-1Q8IUB9 90 aa4.24□□□□□ -1.73
ZNF558-207ENST00000601372 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
ZNF558-207ENST00000601372 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
ZNF558-207ENST00000601372 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
ZNF558-207ENST00000601372 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
ZNF558-207ENST00000601372 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
ZNF558-207ENST00000601372 HERC1Q15751 4861 aa4.19□□□□□ -1.74
ZNF558-207ENST00000601372 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
ZNF558-207ENST00000601372 MT1BP07438 61 aa4.14□□□□□ -1.75
ZNF558-207ENST00000601372 SPRR2DP22532 72 aa4.11□□□□□ -1.75
ZNF558-207ENST00000601372 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
ZNF558-207ENST00000601372 MT1XP80297 61 aa4.11□□□□□ -1.75
ZNF558-207ENST00000601372 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
ZNF558-207ENST00000601372 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.76
ZNF558-207ENST00000601372 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
ZNF558-207ENST00000601372 LCE2BO14633 110 aa4.06□□□□□ -1.76
ZNF558-207ENST00000601372 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
ZNF558-207ENST00000601372 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
ZNF558-207ENST00000601372 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
ZNF558-207ENST00000601372 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
ZNF558-207ENST00000601372 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
ZNF558-207ENST00000601372 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
ZNF558-207ENST00000601372 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
ZNF558-207ENST00000601372 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
ZNF558-207ENST00000601372 MT1GP13640 62 aa3.85□□□□□ -1.79
ZNF558-207ENST00000601372 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
ZNF558-207ENST00000601372 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
ZNF558-207ENST00000601372 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
ZNF558-207ENST00000601372 MUC2Q02817 5179 aa3.77□□□□□ -1.81
ZNF558-207ENST00000601372 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
ZNF558-207ENST00000601372 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
ZNF558-207ENST00000601372 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
ZNF558-207ENST00000601372 HMCN2Q8NDA2 5059 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms