RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 TACC2O95359 2948 aa1.68□□□□□ -2.14
VMP1-212ENST00000591782 SPRR1AP35321 89 aa1.68□□□□□ -2.14
VMP1-212ENST00000591782 Q6ZSA8 131 aa1.68□□□□□ -2.14
VMP1-212ENST00000591782 MGAM2Q2M2H8 2515 aa1.68□□□□□ -2.14
VMP1-212ENST00000591782 NSD1Q96L73 2696 aaPredicted RBP1.67□□□□□ -2.14
VMP1-212ENST00000591782 ACANP16112 2415 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 DEFB130BP0DP73 79 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 DEFB130AP0DP74 79 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 UNQ6190/PRO20217Q6UXQ8 127 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 BRD3OSQ6XYD6 125 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 MXRA5Q9NR99 2828 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 WNK1Q9H4A3 2382 aa1.67□□□□□ -2.14
VMP1-212ENST00000591782 PRKDCP78527 4128 aaKnown RBP1.67□□□□□ -2.14
VMP1-212ENST00000591782 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
VMP1-212ENST00000591782 SPRR1BP22528 89 aa1.66□□□□□ -2.14
VMP1-212ENST00000591782 TRRAPQ9Y4A5 3859 aa1.66□□□□□ -2.14
VMP1-212ENST00000591782 HERC1Q15751 4861 aa1.65□□□□□ -2.14
VMP1-212ENST00000591782 SVEP1Q4LDE5 3571 aa1.65□□□□□ -2.15
VMP1-212ENST00000591782 MAP1AP78559 2803 aaPredicted RBP1.65□□□□□ -2.15
VMP1-212ENST00000591782 LYNX1P0DP58 116 aa1.64□□□□□ -2.15
VMP1-212ENST00000591782 SMR3AQ99954 134 aa1.64□□□□□ -2.15
VMP1-212ENST00000591782 K7EIL1 84 aa1.63□□□□□ -2.15
VMP1-212ENST00000591782 DEFB1P60022 68 aa1.63□□□□□ -2.15
VMP1-212ENST00000591782 PRO0255Q9UI72 69 aa1.63□□□□□ -2.15
VMP1-212ENST00000591782 AKAP6Q13023 2319 aa1.63□□□□□ -2.15
VMP1-212ENST00000591782 HIVEP2P31629 2446 aa1.62□□□□□ -2.15
VMP1-212ENST00000591782 ABCA13Q86UQ4 5058 aa1.62□□□□□ -2.15
VMP1-212ENST00000591782 SPINK1P00995 79 aa1.62□□□□□ -2.15
VMP1-212ENST00000591782 KRTAP13-1Q8IUC0 172 aa1.62□□□□□ -2.15
VMP1-212ENST00000591782 SACSQ9NZJ4 4579 aa1.62□□□□□ -2.15
VMP1-212ENST00000591782 MUC2Q02817 5179 aa1.62□□□□□ -2.15
VMP1-212ENST00000591782 LELP1Q5T871 98 aa1.61□□□□□ -2.15
VMP1-212ENST00000591782 DEFB119Q8N690 84 aa1.61□□□□□ -2.15
VMP1-212ENST00000591782 APLNQ9ULZ1 77 aa1.61□□□□□ -2.15
VMP1-212ENST00000591782 SONP18583 2426 aaKnown RBP1.6□□□□□ -2.15
VMP1-212ENST00000591782 TENM3Q9P273 2699 aa1.6□□□□□ -2.15
VMP1-212ENST00000591782 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
VMP1-212ENST00000591782 C10orf95Q9H7T3 257 aa1.6□□□□□ -2.15
VMP1-212ENST00000591782 TENM2Q9NT68 2774 aa1.59□□□□□ -2.15
VMP1-212ENST00000591782 DNAH1Q9P2D7 4330 aa1.59□□□□□ -2.16
VMP1-212ENST00000591782 PKDREJQ9NTG1 2253 aa1.58□□□□□ -2.16
VMP1-212ENST00000591782 ANK3Q12955 4377 aaKnown RBP1.58□□□□□ -2.16
VMP1-212ENST00000591782 COL7A1Q02388 2944 aa1.57□□□□□ -2.16
VMP1-212ENST00000591782 DEFB133Q30KQ1 61 aa1.57□□□□□ -2.16
VMP1-212ENST00000591782 S4R3F8 94 aa1.57□□□□□ -2.16
VMP1-212ENST00000591782 DYNC2H1Q8NCM8 4307 aaKnown RBP1.57□□□□□ -2.16
VMP1-212ENST00000591782 Q5VSD8 79 aa1.56□□□□□ -2.16
VMP1-212ENST00000591782 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
VMP1-212ENST00000591782 DEFB136Q30KP8 78 aa1.55□□□□□ -2.16
VMP1-212ENST00000591782 CMYA5Q8N3K9 4069 aa1.54□□□□□ -2.16
VMP1-212ENST00000591782 FLG2Q5D862 2391 aaPredicted RBP1.54□□□□□ -2.16
VMP1-212ENST00000591782 HECTD4Q9Y4D8 3996 aa1.53□□□□□ -2.16
VMP1-212ENST00000591782 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
VMP1-212ENST00000591782 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
VMP1-212ENST00000591782 LYSTQ99698 3801 aa1.52□□□□□ -2.17
VMP1-212ENST00000591782 RNF213Q63HN8 5207 aa1.52□□□□□ -2.17
VMP1-212ENST00000591782 A0A0D9SG42 100 aa1.52□□□□□ -2.17
VMP1-212ENST00000591782 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
VMP1-212ENST00000591782 SPINK6Q6UWN8 80 aa1.52□□□□□ -2.17
VMP1-212ENST00000591782 H3BNG1 76 aa1.51□□□□□ -2.17
VMP1-212ENST00000591782 ROS1P08922 2347 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 FRAS1Q86XX4 4008 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 A0A096LPF7 62 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 M0QZ58 72 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 CRCT1Q9UGL9 99 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
VMP1-212ENST00000591782 A0A096LNI7 61 aa1.49□□□□□ -2.17
VMP1-212ENST00000591782 LINC01556Q5JQF7 62 aa1.49□□□□□ -2.17
VMP1-212ENST00000591782 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
VMP1-212ENST00000591782 SPART-AS1P0CW21 52 aa1.48□□□□□ -2.17
VMP1-212ENST00000591782 CSMD3Q7Z407 3707 aa1.48□□□□□ -2.17
VMP1-212ENST00000591782 STAB2Q8WWQ8 2551 aa1.46□□□□□ -2.18
VMP1-212ENST00000591782 KMT2AQ03164 3969 aa1.45□□□□□ -2.18
VMP1-212ENST00000591782 HMCN2Q8NDA2 5059 aa1.44□□□□□ -2.18
VMP1-212ENST00000591782 KRTAP12-1P59990 96 aa1.44□□□□□ -2.18
VMP1-212ENST00000591782 PKHD1P08F94 4074 aa1.44□□□□□ -2.18
VMP1-212ENST00000591782 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
VMP1-212ENST00000591782 DNAH9Q9NYC9 4486 aa1.42□□□□□ -2.18
VMP1-212ENST00000591782 HTN3P15516 51 aa1.42□□□□□ -2.18
VMP1-212ENST00000591782 DNAH7Q8WXX0 4024 aa1.42□□□□□ -2.18
VMP1-212ENST00000591782 HUWE1Q7Z6Z7 4374 aaKnown RBP1.41□□□□□ -2.18
VMP1-212ENST00000591782 DMBT1Q9UGM3 2413 aaPredicted RBP1.41□□□□□ -2.18
VMP1-212ENST00000591782 HSPG2P98160 4391 aa1.41□□□□□ -2.18
VMP1-212ENST00000591782 U3KQA8 63 aa1.39□□□□□ -2.19
VMP1-212ENST00000591782 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
VMP1-212ENST00000591782 DNAH10Q8IVF4 4471 aa1.38□□□□□ -2.19
VMP1-212ENST00000591782 TNP1P09430 55 aa1.38□□□□□ -2.19
VMP1-212ENST00000591782 RPS29P62273 56 aaKnown RBP1.38□□□□□ -2.19
VMP1-212ENST00000591782 SRRM2Q9UQ35 2752 aaKnown RBP1.38□□□□□ -2.19
VMP1-212ENST00000591782 FAT2Q9NYQ8 4349 aa1.38□□□□□ -2.19
VMP1-212ENST00000591782 PLECQ15149 4684 aaKnown RBP1.37□□□□□ -2.19
VMP1-212ENST00000591782 DYNC1H1Q14204 4646 aaKnown RBP1.37□□□□□ -2.19
VMP1-212ENST00000591782 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
VMP1-212ENST00000591782 STARD9Q9P2P6 4700 aa1.36□□□□□ -2.19
VMP1-212ENST00000591782 DNAH3Q8TD57 4116 aa1.36□□□□□ -2.19
VMP1-212ENST00000591782 NEBP20929 6669 aa1.35□□□□□ -2.19
VMP1-212ENST00000591782 MYCBP2O75592 4640 aa1.35□□□□□ -2.19
VMP1-212ENST00000591782 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
VMP1-212ENST00000591782 SSPOA2VEC9 5147 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms