RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 LOC110117498A0A087WWA1 95 aa2.57□□□□□ -2
LINC01539-202ENST00000589293 KRTAP5-9P26371 169 aa2.57□□□□□ -2
LINC01539-202ENST00000589293 IMUPQ9GZP8 106 aa2.57□□□□□ -2
LINC01539-202ENST00000589293 UQCR10Q9UDW1 63 aa2.57□□□□□ -2
LINC01539-202ENST00000589293 MMP24-AS1A0A0U1RRL7 71 aa2.56□□□□□ -2
LINC01539-202ENST00000589293 C5orf47Q569G3 176 aa2.56□□□□□ -2
LINC01539-202ENST00000589293 C14orf132Q9NPU4 83 aa2.56□□□□□ -2
LINC01539-202ENST00000589293 C4orf26Q17RF5 130 aa2.55□□□□□ -2
LINC01539-202ENST00000589293 CSAG1Q6PB30 78 aa2.55□□□□□ -2
LINC01539-202ENST00000589293 K7EQZ3 153 aa2.54□□□□□ -2
LINC01539-202ENST00000589293 BPY2O14599 106 aa2.54□□□□□ -2
LINC01539-202ENST00000589293 S4R3F8 94 aa2.54□□□□□ -2
LINC01539-202ENST00000589293 HCG22E2RYF7 251 aa2.53□□□□□ -2
LINC01539-202ENST00000589293 M0R143 59 aa2.53□□□□□ -2
LINC01539-202ENST00000589293 CASC2Q6XLA1 102 aa2.53□□□□□ -2
LINC01539-202ENST00000589293 TSTD3H0UI37 97 aa2.52□□□□□ -2.01
LINC01539-202ENST00000589293 PYY3Q5JQD4 70 aa2.51□□□□□ -2.01
LINC01539-202ENST00000589293 NEBP20929 6669 aa2.5□□□□□ -2.01
LINC01539-202ENST00000589293 Q5W150 140 aa2.5□□□□□ -2.01
LINC01539-202ENST00000589293 C1orf64Q8NEQ6 169 aa2.5□□□□□ -2.01
LINC01539-202ENST00000589293 NAA38Q9BRA0 125 aaKnown RBP2.5□□□□□ -2.01
LINC01539-202ENST00000589293 KLKP1Q107X0 134 aa2.49□□□□□ -2.01
LINC01539-202ENST00000589293 SPRR2GQ9BYE4 73 aa2.49□□□□□ -2.01
LINC01539-202ENST00000589293 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
LINC01539-202ENST00000589293 MT1BP07438 61 aa2.48□□□□□ -2.01
LINC01539-202ENST00000589293 KRTAP19-8Q3LI54 63 aa2.48□□□□□ -2.01
LINC01539-202ENST00000589293 LCA10Q71F78 164 aa2.48□□□□□ -2.01
LINC01539-202ENST00000589293 H3BT86 120 aa2.47□□□□□ -2.01
LINC01539-202ENST00000589293 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
LINC01539-202ENST00000589293 Q8N9L7 120 aa2.47□□□□□ -2.01
LINC01539-202ENST00000589293 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
LINC01539-202ENST00000589293 CRIPTQ9P021 101 aa2.47□□□□□ -2.01
LINC01539-202ENST00000589293 UBL5Q9BZL1 73 aa2.46□□□□□ -2.02
LINC01539-202ENST00000589293 BATFQ16520 125 aa2.45□□□□□ -2.02
LINC01539-202ENST00000589293 TP53AIP1Q9HCN2 124 aa2.45□□□□□ -2.02
LINC01539-202ENST00000589293 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
LINC01539-202ENST00000589293 SPRR2EP22531 72 aa2.43□□□□□ -2.02
LINC01539-202ENST00000589293 SPRR2BP35325 72 aa2.43□□□□□ -2.02
LINC01539-202ENST00000589293 SPRR2AP35326 72 aa2.43□□□□□ -2.02
LINC01539-202ENST00000589293 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
LINC01539-202ENST00000589293 KMT2DO14686 5537 aa2.41□□□□□ -2.02
LINC01539-202ENST00000589293 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
LINC01539-202ENST00000589293 NDUFC1O43677 76 aa2.41□□□□□ -2.02
LINC01539-202ENST00000589293 PLAC4Q8WY50 150 aa2.41□□□□□ -2.02
LINC01539-202ENST00000589293 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
LINC01539-202ENST00000589293 A8MUN3 132 aa2.4□□□□□ -2.03
LINC01539-202ENST00000589293 A0A1W2PPM0 123 aa2.39□□□□□ -2.03
LINC01539-202ENST00000589293 KRTAP8-1Q8IUC2 63 aa2.39□□□□□ -2.03
LINC01539-202ENST00000589293 LOC101927531A0A1B0GV80 90 aa2.38□□□□□ -2.03
LINC01539-202ENST00000589293 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
LINC01539-202ENST00000589293 TRAV22A0A0B4J277 110 aa2.37□□□□□ -2.03
LINC01539-202ENST00000589293 ACYP1P07311 99 aa2.37□□□□□ -2.03
LINC01539-202ENST00000589293 CYP4F30PQ9H0H9 118 aa2.37□□□□□ -2.03
LINC01539-202ENST00000589293 SPCS1Q9Y6A9 102 aa2.37□□□□□ -2.03
LINC01539-202ENST00000589293 H0YAA0 97 aa2.36□□□□□ -2.03
LINC01539-202ENST00000589293 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
LINC01539-202ENST00000589293 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
LINC01539-202ENST00000589293 C20orf197Q8N268 126 aa2.36□□□□□ -2.03
LINC01539-202ENST00000589293 SMIM6P0DI80 62 aa2.35□□□□□ -2.03
LINC01539-202ENST00000589293 SPRR2DP22532 72 aa2.35□□□□□ -2.03
LINC01539-202ENST00000589293 R4GN34 69 aa2.35□□□□□ -2.03
LINC01539-202ENST00000589293 K7EP34 96 aa2.34□□□□□ -2.03
LINC01539-202ENST00000589293 ATOX1O00244 68 aa2.34□□□□□ -2.03
LINC01539-202ENST00000589293 TAX1BP3O14907 124 aa2.34□□□□□ -2.03
LINC01539-202ENST00000589293 A0A087WVE0 104 aa2.33□□□□□ -2.04
LINC01539-202ENST00000589293 H0Y9P7 68 aa2.31□□□□□ -2.04
LINC01539-202ENST00000589293 M0QZ58 72 aa2.31□□□□□ -2.04
LINC01539-202ENST00000589293 UQCRQO14949 82 aa2.31□□□□□ -2.04
LINC01539-202ENST00000589293 LINC01554Q52M75 96 aa2.31□□□□□ -2.04
LINC01539-202ENST00000589293 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
LINC01539-202ENST00000589293 HIST1H4AP62805 103 aaKnown RBP2.3□□□□□ -2.04
LINC01539-202ENST00000589293 MT1XP80297 61 aa2.3□□□□□ -2.04
LINC01539-202ENST00000589293 GTF2H5Q6ZYL4 71 aa2.29□□□□□ -2.04
LINC01539-202ENST00000589293 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
LINC01539-202ENST00000589293 PRO0461Q9UI25 63 aa2.29□□□□□ -2.04
LINC01539-202ENST00000589293 COL5A1-AS1Q5SY13 56 aa2.28□□□□□ -2.04
LINC01539-202ENST00000589293 MT-ATP8P03928 68 aa2.27□□□□□ -2.05
LINC01539-202ENST00000589293 MP68P56378 58 aa2.27□□□□□ -2.05
LINC01539-202ENST00000589293 F8W1H4 67 aa2.26□□□□□ -2.05
LINC01539-202ENST00000589293 ATP5EP2Q5VTU8 51 aa2.26□□□□□ -2.05
LINC01539-202ENST00000589293 LINC00208Q96KT6 92 aa2.26□□□□□ -2.05
LINC01539-202ENST00000589293 ETDBQ3ZM63 59 aa2.25□□□□□ -2.05
LINC01539-202ENST00000589293 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
LINC01539-202ENST00000589293 P0C880 135 aa2.24□□□□□ -2.05
LINC01539-202ENST00000589293 SPTSSBQ8NFR3 76 aa2.21□□□□□ -2.06
LINC01539-202ENST00000589293 FAM240AA0A1B0GVK7 77 aa2.19□□□□□ -2.06
LINC01539-202ENST00000589293 H3BPC8 53 aa2.19□□□□□ -2.06
LINC01539-202ENST00000589293 DMAC1Q96GE9 116 aa2.18□□□□□ -2.06
LINC01539-202ENST00000589293 TRAV7A0A075B6U4 112 aa2.17□□□□□ -2.06
LINC01539-202ENST00000589293 SCGB1A1P11684 91 aa2.17□□□□□ -2.06
LINC01539-202ENST00000589293 CAMK2N1Q7Z7J9 78 aa2.17□□□□□ -2.06
LINC01539-202ENST00000589293 LINC00643Q86TS7 51 aa2.17□□□□□ -2.06
LINC01539-202ENST00000589293 CHKB-CPT1BH3BT56 60 aa2.16□□□□□ -2.06
LINC01539-202ENST00000589293 ACYP2P14621 99 aa2.16□□□□□ -2.06
LINC01539-202ENST00000589293 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
LINC01539-202ENST00000589293 LOC105371267A0A1B0GV96 52 aa2.14□□□□□ -2.07
LINC01539-202ENST00000589293 SEC61GP60059 68 aa2.14□□□□□ -2.07
LINC01539-202ENST00000589293 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
LINC01539-202ENST00000589293 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
LINC01539-202ENST00000589293 PCP4L1A6NKN8 68 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms