RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
TUBD1-209ENST00000588706 UQCR11O14957 56 aa5.7□□□□□ -1.5
TUBD1-209ENST00000588706 RETNLBQ9BQ08 111 aa5.68□□□□□ -1.5
TUBD1-209ENST00000588706 SPATA8Q6RVD6 105 aa5.67□□□□□ -1.5
TUBD1-209ENST00000588706 PKD1P98161 4303 aa5.66□□□□□ -1.5
TUBD1-209ENST00000588706 A6NN06 94 aa5.66□□□□□ -1.5
TUBD1-209ENST00000588706 SPINK7P58062 85 aa5.66□□□□□ -1.5
TUBD1-209ENST00000588706 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
TUBD1-209ENST00000588706 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
TUBD1-209ENST00000588706 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
TUBD1-209ENST00000588706 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
TUBD1-209ENST00000588706 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
TUBD1-209ENST00000588706 SMR3BP02814 79 aaPredicted RBP5.6□□□□□ -1.51
TUBD1-209ENST00000588706 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
TUBD1-209ENST00000588706 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
TUBD1-209ENST00000588706 A8MU10 97 aa5.56□□□□□ -1.52
TUBD1-209ENST00000588706 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
TUBD1-209ENST00000588706 COX6B2Q6YFQ2 88 aa5.55□□□□□ -1.52
TUBD1-209ENST00000588706 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
TUBD1-209ENST00000588706 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
TUBD1-209ENST00000588706 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
TUBD1-209ENST00000588706 MT3P25713 68 aa5.5□□□□□ -1.53
TUBD1-209ENST00000588706 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
TUBD1-209ENST00000588706 DYNC1H1Q14204 4646 aaKnown RBP5.48□□□□□ -1.53
TUBD1-209ENST00000588706 Q5VSD8 79 aa5.48□□□□□ -1.53
TUBD1-209ENST00000588706 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
TUBD1-209ENST00000588706 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
TUBD1-209ENST00000588706 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
TUBD1-209ENST00000588706 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
TUBD1-209ENST00000588706 A0A1B0GU33 70 aa5.45□□□□□ -1.54
TUBD1-209ENST00000588706 K7ERS5 55 aa5.45□□□□□ -1.54
TUBD1-209ENST00000588706 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
TUBD1-209ENST00000588706 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
TUBD1-209ENST00000588706 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
TUBD1-209ENST00000588706 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
TUBD1-209ENST00000588706 H0YAA0 97 aa5.34□□□□□ -1.55
TUBD1-209ENST00000588706 S4R3F8 94 aa5.34□□□□□ -1.55
TUBD1-209ENST00000588706 RYR2Q92736 4967 aa5.29□□□□□ -1.56
TUBD1-209ENST00000588706 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
TUBD1-209ENST00000588706 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
TUBD1-209ENST00000588706 FAT1Q14517 4588 aa5.27□□□□□ -1.57
TUBD1-209ENST00000588706 TNXBP22105 4242 aa5.25□□□□□ -1.57
TUBD1-209ENST00000588706 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
TUBD1-209ENST00000588706 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
TUBD1-209ENST00000588706 FAT3Q8TDW7 4589 aa5.22□□□□□ -1.57
TUBD1-209ENST00000588706 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
TUBD1-209ENST00000588706 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
TUBD1-209ENST00000588706 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
TUBD1-209ENST00000588706 M0QZ58 72 aa5.19□□□□□ -1.58
TUBD1-209ENST00000588706 ROMO1P60602 79 aa5.16□□□□□ -1.58
TUBD1-209ENST00000588706 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
TUBD1-209ENST00000588706 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
TUBD1-209ENST00000588706 HSPG2P98160 4391 aa5.14□□□□□ -1.59
TUBD1-209ENST00000588706 RYR1P21817 5038 aa5.13□□□□□ -1.59
TUBD1-209ENST00000588706 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.6
TUBD1-209ENST00000588706 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
TUBD1-209ENST00000588706 P0C880 135 aa5.04□□□□□ -1.6
TUBD1-209ENST00000588706 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
TUBD1-209ENST00000588706 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
TUBD1-209ENST00000588706 A0A0D9SG42 100 aa5.01□□□□□ -1.61
TUBD1-209ENST00000588706 CRIPTQ9P021 101 aa4.99□□□□□ -1.61
TUBD1-209ENST00000588706 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
TUBD1-209ENST00000588706 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
TUBD1-209ENST00000588706 KRTAP5-11Q6L8G4 156 aa4.96□□□□□ -1.62
TUBD1-209ENST00000588706 R4GN34 69 aa4.95□□□□□ -1.62
TUBD1-209ENST00000588706 RYR3Q15413 4870 aa4.95□□□□□ -1.62
TUBD1-209ENST00000588706 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
TUBD1-209ENST00000588706 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
TUBD1-209ENST00000588706 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.62
TUBD1-209ENST00000588706 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
TUBD1-209ENST00000588706 LCE1FQ5T754 118 aa4.87□□□□□ -1.63
TUBD1-209ENST00000588706 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
TUBD1-209ENST00000588706 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
TUBD1-209ENST00000588706 LRP2P98164 4655 aa4.79□□□□□ -1.64
TUBD1-209ENST00000588706 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
TUBD1-209ENST00000588706 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
TUBD1-209ENST00000588706 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
TUBD1-209ENST00000588706 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
TUBD1-209ENST00000588706 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
TUBD1-209ENST00000588706 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
TUBD1-209ENST00000588706 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
TUBD1-209ENST00000588706 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
TUBD1-209ENST00000588706 LPAP08519 4548 aa4.63□□□□□ -1.67
TUBD1-209ENST00000588706 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TUBD1-209ENST00000588706 HERC2O95714 4834 aa4.6□□□□□ -1.67
TUBD1-209ENST00000588706 TNP1P09430 55 aa4.58□□□□□ -1.68
TUBD1-209ENST00000588706 BIRC6Q9NR09 4857 aa4.58□□□□□ -1.68
TUBD1-209ENST00000588706 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
TUBD1-209ENST00000588706 ABCA13Q86UQ4 5058 aa4.57□□□□□ -1.68
TUBD1-209ENST00000588706 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
TUBD1-209ENST00000588706 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
TUBD1-209ENST00000588706 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
TUBD1-209ENST00000588706 HERC1Q15751 4861 aa4.47□□□□□ -1.69
TUBD1-209ENST00000588706 M0R2T5 61 aa4.46□□□□□ -1.7
TUBD1-209ENST00000588706 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
TUBD1-209ENST00000588706 MT1HP80294 61 aa4.41□□□□□ -1.7
TUBD1-209ENST00000588706 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
TUBD1-209ENST00000588706 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
TUBD1-209ENST00000588706 KRTAP10-10P60014 251 aa4.35□□□□□ -1.71
TUBD1-209ENST00000588706 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms