RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 TRIOO75962 3097 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 DNAH2Q9P225 4427 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 NBEAL1Q6ZS30 2694 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 DNAH3Q8TD57 4116 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 DUOX1Q9NRD9 1551 aa0.02□□□□□ -2.41
TUBD1-207ENST00000587476 STAB2Q8WWQ8 2551 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 VPS13DQ5THJ4 4388 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 NBEAL2Q6ZNJ1 2754 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 PKHD1L1Q86WI1 4243 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 DEFB104AQ8WTQ1 72 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 ARHGAP5-AS1Q96IT6 56 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 COL6A5A8TX70 2615 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 TGP01266 2768 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 NBEAQ8NFP9 2946 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 LAMA1P25391 3075 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 FAT1Q14517 4588 aa0.01□□□□□ -2.41
TUBD1-207ENST00000587476 WDR87Q6ZQQ6 2873 aa0□□□□□ -2.41
TUBD1-207ENST00000587476 KALRNO60229 2985 aa0□□□□□ -2.41
TUBD1-207ENST00000587476 MUC2Q02817 5179 aa0□□□□□ -2.41
TUBD1-207ENST00000587476 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
TUBD1-207ENST00000587476 LINC01590Q5TEZ4 76 aa0□□□□□ -2.41
TUBD1-207ENST00000587476 COL12A1Q99715 3063 aa0□□□□□ -2.41
TUBD1-207ENST00000587476 LAMA5O15230 3695 aa-0□□□□□ -2.41
TUBD1-207ENST00000587476 HTTP42858 3142 aa-0□□□□□ -2.41
TUBD1-207ENST00000587476 MAP1AP78559 2803 aaPredicted RBP-0□□□□□ -2.41
TUBD1-207ENST00000587476 HIVEP1P15822 2718 aa-0□□□□□ -2.41
TUBD1-207ENST00000587476 A0A0C4DFX4 3053 aa-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 AKAP9Q99996 3911 aa-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 USP9XQ93008 2570 aaPredicted RBP-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 KRTAP19-8Q3LI54 63 aa-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 TLN2Q9Y4G6 2542 aa-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 HERC1Q15751 4861 aa-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 SSPOA2VEC9 5147 aa-0.01□□□□□ -2.41
TUBD1-207ENST00000587476 MXRA5Q9NR99 2828 aa-0.02□□□□□ -2.41
TUBD1-207ENST00000587476 DNAH6Q9C0G6 4158 aa-0.02□□□□□ -2.41
TUBD1-207ENST00000587476 MUC12Q9UKN1 5478 aa-0.02□□□□□ -2.41
TUBD1-207ENST00000587476 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
TUBD1-207ENST00000587476 SPTBN5Q9NRC6 3674 aaKnown RBP-0.02□□□□□ -2.41
TUBD1-207ENST00000587476 PCLOQ9Y6V0 5065 aa-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 CELSR3Q9NYQ7 3312 aa-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 DNAH8Q96JB1 4490 aa-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 DNAH1Q9P2D7 4330 aa-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 USP9YO00507 2555 aaPredicted RBP-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 MT1HP80294 61 aa-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 SPENQ96T58 3664 aaKnown RBP-0.03□□□□□ -2.41
TUBD1-207ENST00000587476 CRYBG3Q68DQ2 2970 aa-0.04□□□□□ -2.42
TUBD1-207ENST00000587476 NBPF19A0A087WUL8 3843 aa-0.04□□□□□ -2.42
TUBD1-207ENST00000587476 TTTY10Q9BZA0 68 aa-0.04□□□□□ -2.42
TUBD1-207ENST00000587476 MUC17Q685J3 4493 aa-0.04□□□□□ -2.42
TUBD1-207ENST00000587476 KMT2CQ8NEZ4 4911 aaKnown RBP-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 A0A096LNI7 61 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 H3BSH0 61 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 PRCDQ00LT1 54 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 RHPN1-AS1Q9BWJ2 59 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 USH2AO75445 5202 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 STARD9Q9P2P6 4700 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 CHD7Q9P2D1 2997 aa-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 SPTAN1Q13813 2472 aaKnown RBP-0.05□□□□□ -2.42
TUBD1-207ENST00000587476 MACF1Q9UPN3 7388 aaKnown RBP-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 PLECQ15149 4684 aaKnown RBP-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 K7EIM0 57 aa-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 MT1EP04732 61 aa-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 DEFB136Q30KP8 78 aa-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 DNAH7Q8WXX0 4024 aa-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 GCC2Q8IWJ2 1684 aa-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 FRYQ5TBA9 3013 aa-0.06□□□□□ -2.42
TUBD1-207ENST00000587476 DNAH10Q8IVF4 4471 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 MT1LQ93083 61 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 ZFHX4Q86UP3 3567 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 CSMD1Q96PZ7 3565 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 ITPR3Q14573 2671 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 DOPEY1Q5JWR5 2465 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 RELNP78509 3460 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 DYNC1H1Q14204 4646 aaKnown RBP-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 ADGRG4Q8IZF6 3080 aa-0.07□□□□□ -2.42
TUBD1-207ENST00000587476 C5orf42Q9H799 3197 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 ITPR1Q14643 2758 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 DEFB4AO15263 64 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 MT1XP80297 61 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 KRTAP20-2Q3LI61 65 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 MGAQ8IWI9 3026 aa-0.08□□□□□ -2.42
TUBD1-207ENST00000587476 DNAH17Q9UFH2 4485 aa-0.09□□□□□ -2.42
TUBD1-207ENST00000587476 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
TUBD1-207ENST00000587476 HTN1P15515 57 aa-0.09□□□□□ -2.42
TUBD1-207ENST00000587476 TEX15Q9BXT5 2789 aa-0.09□□□□□ -2.42
TUBD1-207ENST00000587476 CEP250Q9BV73 2442 aa-0.1□□□□□ -2.43
TUBD1-207ENST00000587476 MT4P47944 62 aa-0.1□□□□□ -2.43
TUBD1-207ENST00000587476 LAMA2P24043 3122 aaKnown RBP-0.1□□□□□ -2.43
TUBD1-207ENST00000587476 CFAP46Q8IYW2 2715 aa-0.1□□□□□ -2.43
TUBD1-207ENST00000587476 DMXL2Q8TDJ6 3036 aa-0.11□□□□□ -2.43
TUBD1-207ENST00000587476 H3BUX3 64 aa-0.11□□□□□ -2.43
TUBD1-207ENST00000587476 DEFB133Q30KQ1 61 aa-0.11□□□□□ -2.43
TUBD1-207ENST00000587476 TMEM167AQ8TBQ9 72 aa-0.11□□□□□ -2.43
TUBD1-207ENST00000587476 LAMA3Q16787 3333 aa-0.11□□□□□ -2.43
TUBD1-207ENST00000587476 MYO9AB2RTY4 2548 aa-0.12□□□□□ -2.43
TUBD1-207ENST00000587476 RYR1P21817 5038 aa-0.12□□□□□ -2.43
TUBD1-207ENST00000587476 LRBAP50851 2863 aa-0.12□□□□□ -2.43
TUBD1-207ENST00000587476 MT1GP13640 62 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms