RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 ETDCA0A1B0GVM5 59 aa2.85□□□□□ -1.95
TPM4-203ENST00000586193 PDE6GP18545 87 aa2.85□□□□□ -1.95
TPM4-203ENST00000586193 C9orf153Q5TBE3 101 aa2.85□□□□□ -1.95
TPM4-203ENST00000586193 SERP2Q8N6R1 65 aa2.85□□□□□ -1.95
TPM4-203ENST00000586193 ZCCHC13Q8WW36 166 aaKnown RBP2.85□□□□□ -1.95
TPM4-203ENST00000586193 A0A087WTM6 91 aa2.84□□□□□ -1.95
TPM4-203ENST00000586193 HAMPP81172 84 aa2.84□□□□□ -1.95
TPM4-203ENST00000586193 PRLHP81277 87 aa2.84□□□□□ -1.95
TPM4-203ENST00000586193 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
TPM4-203ENST00000586193 LRP1BQ9NZR2 4599 aa2.84□□□□□ -1.96
TPM4-203ENST00000586193 RYR1P21817 5038 aa2.83□□□□□ -1.96
TPM4-203ENST00000586193 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
TPM4-203ENST00000586193 APOBP04114 4563 aaKnown RBP2.82□□□□□ -1.96
TPM4-203ENST00000586193 BCE1O60756 84 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 SMR3BP02814 79 aaPredicted RBP2.82□□□□□ -1.96
TPM4-203ENST00000586193 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 Q5VSD8 79 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 KRTAP13-1Q8IUC0 172 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 SPRR4Q96PI1 79 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
TPM4-203ENST00000586193 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
TPM4-203ENST00000586193 SPRR1BP22528 89 aa2.81□□□□□ -1.96
TPM4-203ENST00000586193 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
TPM4-203ENST00000586193 NREPQ16612 68 aa2.8□□□□□ -1.96
TPM4-203ENST00000586193 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
TPM4-203ENST00000586193 C20orf197Q8N268 126 aa2.79□□□□□ -1.96
TPM4-203ENST00000586193 H7BZZ5 65 aa2.78□□□□□ -1.96
TPM4-203ENST00000586193 K7EQZ3 153 aa2.78□□□□□ -1.96
TPM4-203ENST00000586193 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
TPM4-203ENST00000586193 ATP11AUNQ6ZP68 121 aa2.77□□□□□ -1.97
TPM4-203ENST00000586193 DPH3Q96FX2 82 aa2.77□□□□□ -1.97
TPM4-203ENST00000586193 SNURFQ9Y675 71 aa2.77□□□□□ -1.97
TPM4-203ENST00000586193 RPL37AP61513 92 aaKnown RBP2.76□□□□□ -1.97
TPM4-203ENST00000586193 KLKP1Q107X0 134 aa2.76□□□□□ -1.97
TPM4-203ENST00000586193 FAT1Q14517 4588 aa2.76□□□□□ -1.97
TPM4-203ENST00000586193 F8WEM9 126 aa2.75□□□□□ -1.97
TPM4-203ENST00000586193 LIMD2Q9BT23 127 aa2.75□□□□□ -1.97
TPM4-203ENST00000586193 LINC00472Q9H8W2 130 aa2.75□□□□□ -1.97
TPM4-203ENST00000586193 PLAC8Q9NZF1 115 aa2.75□□□□□ -1.97
TPM4-203ENST00000586193 Q6ZSA8 131 aa2.74□□□□□ -1.97
TPM4-203ENST00000586193 Q96NJ1 140 aa2.74□□□□□ -1.97
TPM4-203ENST00000586193 LINC00474Q9P2X8 69 aa2.73□□□□□ -1.97
TPM4-203ENST00000586193 HERC1Q15751 4861 aa2.73□□□□□ -1.97
TPM4-203ENST00000586193 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
TPM4-203ENST00000586193 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
TPM4-203ENST00000586193 MMP24-AS1A0A0U1RRL7 71 aa2.72□□□□□ -1.97
TPM4-203ENST00000586193 HCG22E2RYF7 251 aa2.72□□□□□ -1.97
TPM4-203ENST00000586193 INE1O15225 51 aa2.72□□□□□ -1.97
TPM4-203ENST00000586193 ATP5EP56381 51 aaPredicted RBP2.72□□□□□ -1.97
TPM4-203ENST00000586193 WFDC13Q8IUB5 93 aa2.72□□□□□ -1.97
TPM4-203ENST00000586193 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
TPM4-203ENST00000586193 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
TPM4-203ENST00000586193 NDUFC1O43677 76 aa2.7□□□□□ -1.98
TPM4-203ENST00000586193 CSAG1Q6PB30 78 aa2.7□□□□□ -1.98
TPM4-203ENST00000586193 SERP1Q9Y6X1 66 aa2.7□□□□□ -1.98
TPM4-203ENST00000586193 KRTAP10-4P60372 401 aaPredicted RBP2.69□□□□□ -1.98
TPM4-203ENST00000586193 DMBT1Q9UGM3 2413 aaPredicted RBP2.69□□□□□ -1.98
TPM4-203ENST00000586193 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
TPM4-203ENST00000586193 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
TPM4-203ENST00000586193 PKHD1L1Q86WI1 4243 aa2.66□□□□□ -1.98
TPM4-203ENST00000586193 TRAV22A0A0B4J277 110 aa2.65□□□□□ -1.99
TPM4-203ENST00000586193 H0Y9P7 68 aa2.65□□□□□ -1.99
TPM4-203ENST00000586193 CYP4F30PQ9H0H9 118 aa2.65□□□□□ -1.99
TPM4-203ENST00000586193 LINC00208Q96KT6 92 aa2.64□□□□□ -1.99
TPM4-203ENST00000586193 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
TPM4-203ENST00000586193 MT1HL1P0DM35 61 aa2.63□□□□□ -1.99
TPM4-203ENST00000586193 SSBP3-AS1Q7Z2R9 100 aa2.62□□□□□ -1.99
TPM4-203ENST00000586193 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
TPM4-203ENST00000586193 NDUFB1O75438 58 aa2.61□□□□□ -1.99
TPM4-203ENST00000586193 SPINK6Q6UWN8 80 aa2.61□□□□□ -1.99
TPM4-203ENST00000586193 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
TPM4-203ENST00000586193 DMAC1Q96GE9 116 aa2.59□□□□□ -1.99
TPM4-203ENST00000586193 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
TPM4-203ENST00000586193 KRTAP12-3P60328 96 aa2.58□□□□□ -2
TPM4-203ENST00000586193 TP53AIP1Q9HCN2 124 aa2.58□□□□□ -2
TPM4-203ENST00000586193 TNXBP22105 4242 aa2.57□□□□□ -2
TPM4-203ENST00000586193 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
TPM4-203ENST00000586193 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
TPM4-203ENST00000586193 Q5VV11 94 aa2.54□□□□□ -2
TPM4-203ENST00000586193 LRP2P98164 4655 aa2.54□□□□□ -2
TPM4-203ENST00000586193 LPAP08519 4548 aa2.52□□□□□ -2.01
TPM4-203ENST00000586193 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
TPM4-203ENST00000586193 SPINK1P00995 79 aa2.5□□□□□ -2.01
TPM4-203ENST00000586193 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
TPM4-203ENST00000586193 RPS29P62273 56 aaKnown RBP2.49□□□□□ -2.01
TPM4-203ENST00000586193 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
TPM4-203ENST00000586193 SPAG11AQ6PDA7 123 aa2.47□□□□□ -2.01
TPM4-203ENST00000586193 SPTSSBQ8NFR3 76 aa2.47□□□□□ -2.01
TPM4-203ENST00000586193 C9orf92A6NGG3 77 aa2.46□□□□□ -2.02
TPM4-203ENST00000586193 SPINK7P58062 85 aa2.46□□□□□ -2.02
TPM4-203ENST00000586193 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
TPM4-203ENST00000586193 CHKB-CPT1BH3BT56 60 aa2.44□□□□□ -2.02
TPM4-203ENST00000586193 ACYP2P14621 99 aa2.44□□□□□ -2.02
TPM4-203ENST00000586193 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
TPM4-203ENST00000586193 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
TPM4-203ENST00000586193 MUC2Q02817 5179 aa2.42□□□□□ -2.02
TPM4-203ENST00000586193 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
TPM4-203ENST00000586193 RPL37P61927 97 aaKnown RBP2.37□□□□□ -2.03
TPM4-203ENST00000586193 A0A1B0GU69 56 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms