RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 VAMP8Q9BV40 100 aa4.5□□□□□ -1.69
CASC3-208ENST00000583649 S100A6P06703 90 aa4.49□□□□□ -1.69
CASC3-208ENST00000583649 PCP4P48539 62 aa4.49□□□□□ -1.69
CASC3-208ENST00000583649 K7ERJ3 54 aa4.48□□□□□ -1.69
CASC3-208ENST00000583649 S100A1P23297 94 aa4.47□□□□□ -1.69
CASC3-208ENST00000583649 NDUFC1O43677 76 aa4.46□□□□□ -1.7
CASC3-208ENST00000583649 HSD52Q0P140 79 aa4.46□□□□□ -1.7
CASC3-208ENST00000583649 ATXN8Q156A1 80 aa4.46□□□□□ -1.7
CASC3-208ENST00000583649 C14orf132Q9NPU4 83 aa4.46□□□□□ -1.7
CASC3-208ENST00000583649 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
CASC3-208ENST00000583649 NAA38Q9BRA0 125 aaKnown RBP4.43□□□□□ -1.7
CASC3-208ENST00000583649 R4GN34 69 aa4.43□□□□□ -1.7
CASC3-208ENST00000583649 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
CASC3-208ENST00000583649 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
CASC3-208ENST00000583649 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
CASC3-208ENST00000583649 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
CASC3-208ENST00000583649 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
CASC3-208ENST00000583649 Q8N9L7 120 aa4.37□□□□□ -1.71
CASC3-208ENST00000583649 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
CASC3-208ENST00000583649 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
CASC3-208ENST00000583649 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
CASC3-208ENST00000583649 MT4P47944 62 aa4.33□□□□□ -1.72
CASC3-208ENST00000583649 A0A087WVE0 104 aa4.32□□□□□ -1.72
CASC3-208ENST00000583649 M0QZ58 72 aa4.32□□□□□ -1.72
CASC3-208ENST00000583649 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
CASC3-208ENST00000583649 LINC01554Q52M75 96 aa4.3□□□□□ -1.72
CASC3-208ENST00000583649 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
CASC3-208ENST00000583649 CYP4F30PQ9H0H9 118 aa4.3□□□□□ -1.72
CASC3-208ENST00000583649 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
CASC3-208ENST00000583649 ACYP1P07311 99 aa4.28□□□□□ -1.72
CASC3-208ENST00000583649 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
CASC3-208ENST00000583649 TSTD3H0UI37 97 aa4.26□□□□□ -1.73
CASC3-208ENST00000583649 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
CASC3-208ENST00000583649 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
CASC3-208ENST00000583649 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
CASC3-208ENST00000583649 UQCR10Q9UDW1 63 aa4.24□□□□□ -1.73
CASC3-208ENST00000583649 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
CASC3-208ENST00000583649 BATFQ16520 125 aa4.22□□□□□ -1.73
CASC3-208ENST00000583649 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
CASC3-208ENST00000583649 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
CASC3-208ENST00000583649 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
CASC3-208ENST00000583649 K7EP34 96 aa4.2□□□□□ -1.74
CASC3-208ENST00000583649 H3BT86 120 aa4.18□□□□□ -1.74
CASC3-208ENST00000583649 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
CASC3-208ENST00000583649 MT-ATP8P03928 68 aa4.17□□□□□ -1.74
CASC3-208ENST00000583649 P0C880 135 aa4.17□□□□□ -1.74
CASC3-208ENST00000583649 M0R143 59 aa4.15□□□□□ -1.75
CASC3-208ENST00000583649 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
CASC3-208ENST00000583649 MT1EP04732 61 aa4.13□□□□□ -1.75
CASC3-208ENST00000583649 MT1GP13640 62 aa4.12□□□□□ -1.75
CASC3-208ENST00000583649 ATOX1O00244 68 aa4.11□□□□□ -1.75
CASC3-208ENST00000583649 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
CASC3-208ENST00000583649 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
CASC3-208ENST00000583649 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
CASC3-208ENST00000583649 PYY3Q5JQD4 70 aa4.06□□□□□ -1.76
CASC3-208ENST00000583649 SPCS1Q9Y6A9 102 aa4.06□□□□□ -1.76
CASC3-208ENST00000583649 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
CASC3-208ENST00000583649 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
CASC3-208ENST00000583649 A0A1W2PPM0 123 aa4.02□□□□□ -1.77
CASC3-208ENST00000583649 H0Y9P7 68 aa4.02□□□□□ -1.77
CASC3-208ENST00000583649 UQCRQO14949 82 aa4.02□□□□□ -1.77
CASC3-208ENST00000583649 CAMK2N1Q7Z7J9 78 aa4.02□□□□□ -1.77
CASC3-208ENST00000583649 MT1MQ8N339 61 aa3.97□□□□□ -1.77
CASC3-208ENST00000583649 TAX1BP3O14907 124 aa3.96□□□□□ -1.78
CASC3-208ENST00000583649 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
CASC3-208ENST00000583649 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
CASC3-208ENST00000583649 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CASC3-208ENST00000583649 A0A0D9SG42 100 aa3.89□□□□□ -1.79
CASC3-208ENST00000583649 MP68P56378 58 aa3.89□□□□□ -1.79
CASC3-208ENST00000583649 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
CASC3-208ENST00000583649 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
CASC3-208ENST00000583649 MT1LQ93083 61 aa3.85□□□□□ -1.79
CASC3-208ENST00000583649 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
CASC3-208ENST00000583649 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
CASC3-208ENST00000583649 HIST1H4AP62805 103 aaKnown RBP3.83□□□□□ -1.8
CASC3-208ENST00000583649 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
CASC3-208ENST00000583649 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
CASC3-208ENST00000583649 ATP5EP2Q5VTU8 51 aa3.78□□□□□ -1.8
CASC3-208ENST00000583649 ACYP2P14621 99 aa3.75□□□□□ -1.81
CASC3-208ENST00000583649 H3BPC8 53 aa3.74□□□□□ -1.81
CASC3-208ENST00000583649 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
CASC3-208ENST00000583649 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
CASC3-208ENST00000583649 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
CASC3-208ENST00000583649 PRO0461Q9UI25 63 aa3.71□□□□□ -1.82
CASC3-208ENST00000583649 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
CASC3-208ENST00000583649 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
CASC3-208ENST00000583649 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
CASC3-208ENST00000583649 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
CASC3-208ENST00000583649 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
CASC3-208ENST00000583649 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
CASC3-208ENST00000583649 F8W1H4 67 aa3.63□□□□□ -1.83
CASC3-208ENST00000583649 ETDBQ3ZM63 59 aa3.63□□□□□ -1.83
CASC3-208ENST00000583649 SMIM6P0DI80 62 aa3.62□□□□□ -1.83
CASC3-208ENST00000583649 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
CASC3-208ENST00000583649 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
CASC3-208ENST00000583649 GTF2H5Q6ZYL4 71 aa3.61□□□□□ -1.83
CASC3-208ENST00000583649 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
CASC3-208ENST00000583649 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
CASC3-208ENST00000583649 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
CASC3-208ENST00000583649 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms