RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 DYNC2H1Q8NCM8 4307 aaKnown RBP2.79□□□□□ -1.96
RTTN-209ENST00000583043 DNAH3Q8TD57 4116 aa2.79□□□□□ -1.96
RTTN-209ENST00000583043 DNAH6Q9C0G6 4158 aa2.79□□□□□ -1.96
RTTN-209ENST00000583043 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
RTTN-209ENST00000583043 DNAH11Q96DT5 4516 aa2.78□□□□□ -1.96
RTTN-209ENST00000583043 LYSTQ99698 3801 aa2.75□□□□□ -1.97
RTTN-209ENST00000583043 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
RTTN-209ENST00000583043 CSMD3Q7Z407 3707 aa2.73□□□□□ -1.97
RTTN-209ENST00000583043 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
RTTN-209ENST00000583043 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
RTTN-209ENST00000583043 DNAH5Q8TE73 4624 aa2.71□□□□□ -1.98
RTTN-209ENST00000583043 CMYA5Q8N3K9 4069 aa2.71□□□□□ -1.98
RTTN-209ENST00000583043 SACSQ9NZJ4 4579 aa2.68□□□□□ -1.98
RTTN-209ENST00000583043 SRRM2Q9UQ35 2752 aaKnown RBP2.68□□□□□ -1.98
RTTN-209ENST00000583043 LORP23490 312 aaPredicted RBP2.64□□□□□ -1.99
RTTN-209ENST00000583043 STARD9Q9P2P6 4700 aa2.64□□□□□ -1.99
RTTN-209ENST00000583043 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
RTTN-209ENST00000583043 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
RTTN-209ENST00000583043 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
RTTN-209ENST00000583043 RYR2Q92736 4967 aa2.59□□□□□ -1.99
RTTN-209ENST00000583043 LRP1BQ9NZR2 4599 aa2.59□□□□□ -1.99
RTTN-209ENST00000583043 FAT2Q9NYQ8 4349 aa2.58□□□□□ -2
RTTN-209ENST00000583043 HSPG2P98160 4391 aa2.58□□□□□ -2
RTTN-209ENST00000583043 RYR1P21817 5038 aa2.56□□□□□ -2
RTTN-209ENST00000583043 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
RTTN-209ENST00000583043 DNHD1Q96M86 4753 aa2.54□□□□□ -2
RTTN-209ENST00000583043 KRTAP19-4Q3LI73 84 aa2.53□□□□□ -2
RTTN-209ENST00000583043 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
RTTN-209ENST00000583043 HERC1Q15751 4861 aa2.53□□□□□ -2.01
RTTN-209ENST00000583043 HECTD4Q9Y4D8 3996 aa2.52□□□□□ -2.01
RTTN-209ENST00000583043 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
RTTN-209ENST00000583043 PRKDCP78527 4128 aaKnown RBP2.51□□□□□ -2.01
RTTN-209ENST00000583043 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
RTTN-209ENST00000583043 FAT1Q14517 4588 aa2.5□□□□□ -2.01
RTTN-209ENST00000583043 KRTAP4-1Q9BYQ7 146 aa2.48□□□□□ -2.01
RTTN-209ENST00000583043 INE1O15225 51 aa2.48□□□□□ -2.01
RTTN-209ENST00000583043 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
RTTN-209ENST00000583043 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
RTTN-209ENST00000583043 FAT3Q8TDW7 4589 aa2.46□□□□□ -2.02
RTTN-209ENST00000583043 CRCT1Q9UGL9 99 aa2.46□□□□□ -2.02
RTTN-209ENST00000583043 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
RTTN-209ENST00000583043 KMT2AQ03164 3969 aa2.43□□□□□ -2.02
RTTN-209ENST00000583043 RYR3Q15413 4870 aa2.43□□□□□ -2.02
RTTN-209ENST00000583043 MT1HP80294 61 aa2.43□□□□□ -2.02
RTTN-209ENST00000583043 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
RTTN-209ENST00000583043 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
RTTN-209ENST00000583043 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
RTTN-209ENST00000583043 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
RTTN-209ENST00000583043 MT2AP02795 61 aa2.41□□□□□ -2.02
RTTN-209ENST00000583043 PKHD1P08F94 4074 aa2.4□□□□□ -2.03
RTTN-209ENST00000583043 KIAA1109Q2LD37 5005 aa2.4□□□□□ -2.03
RTTN-209ENST00000583043 KRTAP8-1Q8IUC2 63 aa2.4□□□□□ -2.03
RTTN-209ENST00000583043 PKD1P98161 4303 aa2.39□□□□□ -2.03
RTTN-209ENST00000583043 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
RTTN-209ENST00000583043 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
RTTN-209ENST00000583043 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
RTTN-209ENST00000583043 MT3P25713 68 aa2.36□□□□□ -2.03
RTTN-209ENST00000583043 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
RTTN-209ENST00000583043 KRTAP19-1Q8IUB9 90 aa2.34□□□□□ -2.03
RTTN-209ENST00000583043 LRP1Q07954 4544 aaKnown RBP2.34□□□□□ -2.04
RTTN-209ENST00000583043 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.04
RTTN-209ENST00000583043 HYDINQ4G0P3 5121 aa2.34□□□□□ -2.04
RTTN-209ENST00000583043 MT1FP04733 61 aa2.33□□□□□ -2.04
RTTN-209ENST00000583043 SPRR2EP22531 72 aa2.33□□□□□ -2.04
RTTN-209ENST00000583043 SPRR2BP35325 72 aa2.33□□□□□ -2.04
RTTN-209ENST00000583043 SPRR2AP35326 72 aa2.33□□□□□ -2.04
RTTN-209ENST00000583043 TNXBP22105 4242 aa2.31□□□□□ -2.04
RTTN-209ENST00000583043 LCE2CQ5TA81 110 aa2.31□□□□□ -2.04
RTTN-209ENST00000583043 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
RTTN-209ENST00000583043 SPRR2DP22532 72 aa2.28□□□□□ -2.05
RTTN-209ENST00000583043 HERC2O95714 4834 aa2.27□□□□□ -2.05
RTTN-209ENST00000583043 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
RTTN-209ENST00000583043 KRTAP10-7P60409 375 aaPredicted RBP2.26□□□□□ -2.05
RTTN-209ENST00000583043 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
RTTN-209ENST00000583043 MT1BP07438 61 aa2.24□□□□□ -2.05
RTTN-209ENST00000583043 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
RTTN-209ENST00000583043 KRTAP10-5P60370 271 aa2.23□□□□□ -2.05
RTTN-209ENST00000583043 MT1XP80297 61 aa2.23□□□□□ -2.05
RTTN-209ENST00000583043 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
RTTN-209ENST00000583043 PCLOQ9Y6V0 5065 aa2.22□□□□□ -2.05
RTTN-209ENST00000583043 KRTAP9-2Q9BYQ4 174 aa2.21□□□□□ -2.06
RTTN-209ENST00000583043 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
RTTN-209ENST00000583043 KMT2CQ8NEZ4 4911 aaKnown RBP2.2□□□□□ -2.06
RTTN-209ENST00000583043 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
RTTN-209ENST00000583043 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
RTTN-209ENST00000583043 LRP2P98164 4655 aa2.16□□□□□ -2.06
RTTN-209ENST00000583043 ABCA13Q86UQ4 5058 aa2.16□□□□□ -2.06
RTTN-209ENST00000583043 LCE2BO14633 110 aa2.11□□□□□ -2.07
RTTN-209ENST00000583043 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
RTTN-209ENST00000583043 LPAP08519 4548 aa2.09□□□□□ -2.07
RTTN-209ENST00000583043 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.07
RTTN-209ENST00000583043 HMCN2Q8NDA2 5059 aa2.08□□□□□ -2.08
RTTN-209ENST00000583043 LCE2DQ5TA82 110 aaPredicted RBP2.07□□□□□ -2.08
RTTN-209ENST00000583043 MT1GP13640 62 aa2.06□□□□□ -2.08
RTTN-209ENST00000583043 LCE2AQ5TA79 106 aaPredicted RBP2.06□□□□□ -2.08
RTTN-209ENST00000583043 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
RTTN-209ENST00000583043 RNF213Q63HN8 5207 aa2.05□□□□□ -2.08
RTTN-209ENST00000583043 MT1LQ93083 61 aa2.03□□□□□ -2.09
RTTN-209ENST00000583043 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
RTTN-209ENST00000583043 MT1EP04732 61 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms